RNA–Protein interactions for RNA: ENST00000557548.1

TRAV28-201, Transcript of T cell receptor alpha variable 28 (pseudogene), humanhuman

BASIC

Gene TRAV28, Length 323 nt, Biotype TR V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV28-201ENST00000557548 PROSCO94903 275 aa1.64□□□□□ -2.15
TRAV28-201ENST00000557548 CRPP02741 224 aa1.64□□□□□ -2.15
TRAV28-201ENST00000557548 MT-ATP8P03928 68 aa1.64□□□□□ -2.15
TRAV28-201ENST00000557548 CLPSP04118 112 aa1.64□□□□□ -2.15
TRAV28-201ENST00000557548 TRAPPC2P0DI81 140 aa1.64□□□□□ -2.15
TRAV28-201ENST00000557548 TRAPPC2BP0DI82 140 aa1.64□□□□□ -2.15
TRAV28-201ENST00000557548 DEFA4P12838 97 aa1.64□□□□□ -2.15
TRAV28-201ENST00000557548 COX7CP15954 63 aa1.64□□□□□ -2.15
TRAV28-201ENST00000557548 ASIPP42127 132 aa1.64□□□□□ -2.15
TRAV28-201ENST00000557548 POLR2JP52435 117 aaKnown RBP1.64□□□□□ -2.15
TRAV28-201ENST00000557548 UBE2L3P68036 154 aaKnown RBP1.64□□□□□ -2.15
TRAV28-201ENST00000557548 NNATQ16517 81 aa1.64□□□□□ -2.15
TRAV28-201ENST00000557548 Q8N814 137 aa1.64□□□□□ -2.15
TRAV28-201ENST00000557548 C10orf105Q8TEF2 133 aa1.64□□□□□ -2.15
TRAV28-201ENST00000557548 MUCL1Q96DR8 90 aa1.64□□□□□ -2.15
TRAV28-201ENST00000557548 TVP23CQ96ET8 276 aa1.64□□□□□ -2.15
TRAV28-201ENST00000557548 DSCR8Q96T75 97 aa1.64□□□□□ -2.15
TRAV28-201ENST00000557548 S100A13Q99584 98 aa1.64□□□□□ -2.15
TRAV28-201ENST00000557548 IGKV2D-26A0A0A0MRZ7 120 aa1.63□□□□□ -2.15
TRAV28-201ENST00000557548 TRAV14DV4A0A0A6YYC5 116 aa1.63□□□□□ -2.15
TRAV28-201ENST00000557548 TRAV3A0A0B4J244 114 aa1.63□□□□□ -2.15
TRAV28-201ENST00000557548 IGHV1-18A0A0C4DH31 117 aa1.63□□□□□ -2.15
TRAV28-201ENST00000557548 MUC21A0A0G2JKD1 596 aa1.63□□□□□ -2.15
TRAV28-201ENST00000557548 UBL3O95164 117 aa1.63□□□□□ -2.15
TRAV28-201ENST00000557548 IGLV1-51P01701 117 aa1.63□□□□□ -2.15
TRAV28-201ENST00000557548 GYPAP02724 150 aa1.63□□□□□ -2.15
TRAV28-201ENST00000557548 MGST1P10620 155 aaKnown RBP1.63□□□□□ -2.15
TRAV28-201ENST00000557548 SNCAP37840 140 aa1.63□□□□□ -2.15
TRAV28-201ENST00000557548 ROMO1P60602 79 aa1.63□□□□□ -2.15
TRAV28-201ENST00000557548 SPRNQ5BIV9 151 aa1.63□□□□□ -2.15
TRAV28-201ENST00000557548 FAM74A1Q5RGS3 127 aa1.63□□□□□ -2.15
TRAV28-201ENST00000557548 SPANXN1Q5VSR9 72 aa1.63□□□□□ -2.15
TRAV28-201ENST00000557548 CASC2Q6XLA1 102 aa1.63□□□□□ -2.15
TRAV28-201ENST00000557548 Q6ZQT0 140 aa1.63□□□□□ -2.15
TRAV28-201ENST00000557548 FP248Q71RG6 208 aaPredicted RBP1.63□□□□□ -2.15
TRAV28-201ENST00000557548 ZNF720Q7Z2F6 126 aa1.63□□□□□ -2.15
TRAV28-201ENST00000557548 SBSPONQ8IVN8 264 aa1.63□□□□□ -2.15
TRAV28-201ENST00000557548 Q8IYB0 196 aa1.63□□□□□ -2.15
TRAV28-201ENST00000557548 SHANK1Q9Y566 2161 aa1.63□□□□□ -2.15
TRAV28-201ENST00000557548 TCHHQ07283 1943 aa1.63□□□□□ -2.15
TRAV28-201ENST00000557548 TRIOBPQ9H2D6 2365 aa1.63□□□□□ -2.15
TRAV28-201ENST00000557548 COL6A3P12111 3177 aa1.63□□□□□ -2.15
TRAV28-201ENST00000557548 EYSQ5T1H1 3165 aa1.63□□□□□ -2.15
TRAV28-201ENST00000557548 A0A0G2JMZ2 1700 aa1.63□□□□□ -2.15
TRAV28-201ENST00000557548 LRRC37A2A6NM11 1700 aa1.63□□□□□ -2.15
TRAV28-201ENST00000557548 COL4A4P53420 1690 aaPredicted RBP1.62□□□□□ -2.15
TRAV28-201ENST00000557548 IGKV1D-42A0A075B6H8 117 aa1.62□□□□□ -2.15
TRAV28-201ENST00000557548 IGHV3-64A0A075B6Q5 118 aa1.62□□□□□ -2.15
TRAV28-201ENST00000557548 TRAV2A0A0B4J234 112 aa1.62□□□□□ -2.15
TRAV28-201ENST00000557548 LOC107984156A0A0G2JMH3 177 aa1.62□□□□□ -2.15
TRAV28-201ENST00000557548 RBAKDNA6NC62 111 aa1.62□□□□□ -2.15
TRAV28-201ENST00000557548 ODF3BA8MYP8 253 aa1.62□□□□□ -2.15
TRAV28-201ENST00000557548 F8W1H4 67 aa1.62□□□□□ -2.15
TRAV28-201ENST00000557548 K7EP34 96 aa1.62□□□□□ -2.15
TRAV28-201ENST00000557548 PIRTP0C851 137 aa1.62□□□□□ -2.15
TRAV28-201ENST00000557548 BAALC-AS2P0C853 105 aa1.62□□□□□ -2.15
TRAV28-201ENST00000557548 ZNF826PQ6ZT77 177 aa1.62□□□□□ -2.15
TRAV28-201ENST00000557548 ARPINQ7Z6K5 226 aa1.62□□□□□ -2.15
TRAV28-201ENST00000557548 C5orf38Q86SI9 138 aa1.62□□□□□ -2.15
TRAV28-201ENST00000557548 ARL17AQ8IVW1 177 aa1.62□□□□□ -2.15
TRAV28-201ENST00000557548 LYPD1Q8N2G4 141 aa1.62□□□□□ -2.15
TRAV28-201ENST00000557548 TMEM254Q8TBM7 123 aa1.62□□□□□ -2.15
TRAV28-201ENST00000557548 DYNLRB2Q8TF09 96 aa1.62□□□□□ -2.15
TRAV28-201ENST00000557548 C10orf82Q8WW14 230 aa1.62□□□□□ -2.15
TRAV28-201ENST00000557548 CXCL16Q9H2A7 254 aa1.62□□□□□ -2.15
TRAV28-201ENST00000557548 NPVFQ9HCQ7 196 aa1.62□□□□□ -2.15
TRAV28-201ENST00000557548 TET1Q8NFU7 2136 aa1.61□□□□□ -2.15
TRAV28-201ENST00000557548 LAMA4Q16363 1823 aa1.61□□□□□ -2.15
TRAV28-201ENST00000557548 ANK1P16157 1881 aa1.61□□□□□ -2.15
TRAV28-201ENST00000557548 TRAV1-1A0A0B4J248 108 aa1.61□□□□□ -2.15
TRAV28-201ENST00000557548 SDHAF1A6NFY7 115 aa1.61□□□□□ -2.15
TRAV28-201ENST00000557548 HMSDA8MTL9 139 aa1.61□□□□□ -2.15
TRAV28-201ENST00000557548 ATOX1O00244 68 aa1.61□□□□□ -2.15
TRAV28-201ENST00000557548 GNGT2O14610 69 aa1.61□□□□□ -2.15
TRAV28-201ENST00000557548 CYB5AP00167 134 aa1.61□□□□□ -2.15
TRAV28-201ENST00000557548 P0C880 135 aa1.61□□□□□ -2.15
TRAV28-201ENST00000557548 ADCYAP1P18509 176 aa1.61□□□□□ -2.15
TRAV28-201ENST00000557548 DSCR4P56555 118 aaPredicted RBP1.61□□□□□ -2.15
TRAV28-201ENST00000557548 RPL26P61254 145 aaKnown RBP1.61□□□□□ -2.15
TRAV28-201ENST00000557548 INSL4Q14641 139 aa1.61□□□□□ -2.15
TRAV28-201ENST00000557548 C1orf134Q5TEV5 83 aa1.61□□□□□ -2.15
TRAV28-201ENST00000557548 SLC25A26Q70HW3 274 aa1.61□□□□□ -2.15
TRAV28-201ENST00000557548 Q8N8P6 123 aa1.61□□□□□ -2.15
TRAV28-201ENST00000557548 C15orf53Q8NAA6 179 aa1.61□□□□□ -2.15
TRAV28-201ENST00000557548 LINC00052Q96N35 136 aa1.61□□□□□ -2.15
TRAV28-201ENST00000557548 PMCHL2Q9BQD1 86 aa1.61□□□□□ -2.15
TRAV28-201ENST00000557548 DPH3P1Q9H4G8 78 aa1.61□□□□□ -2.15
TRAV28-201ENST00000557548 UQCR10Q9UDW1 63 aa1.61□□□□□ -2.15
TRAV28-201ENST00000557548 CHD3Q12873 2000 aaKnown RBP1.61□□□□□ -2.15
TRAV28-201ENST00000557548 CDH23Q9H251 3354 aa1.61□□□□□ -2.15
TRAV28-201ENST00000557548 SCN3AQ9NY46 2000 aa1.61□□□□□ -2.15
TRAV28-201ENST00000557548 TANC1Q9C0D5 1861 aa1.6□□□□□ -2.15
TRAV28-201ENST00000557548 TNRC6AQ8NDV7 1962 aaKnown RBP1.6□□□□□ -2.15
TRAV28-201ENST00000557548 MALRD1Q5VYJ5 2156 aa1.6□□□□□ -2.15
TRAV28-201ENST00000557548 B4DSR2 109 aa1.6□□□□□ -2.15
TRAV28-201ENST00000557548 E7EUB6 86 aa1.6□□□□□ -2.15
TRAV28-201ENST00000557548 C5orf67F2Z3F1 127 aa1.6□□□□□ -2.15
TRAV28-201ENST00000557548 MIFP14174 115 aa1.6□□□□□ -2.15
TRAV28-201ENST00000557548 KRTDAPP60985 99 aa1.6□□□□□ -2.15
TRAV28-201ENST00000557548 ZNF345Q14585 488 aa1.6□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms