RNA–Protein interactions for RNA: ENST00000557293.5

PSEN1-221, Transcript of presenilin 1, humanhuman

TSL 2

Gene PSEN1, Length 576 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-221ENST00000557293 ZFP82Q8N141 532 aa7.74□□□□□ -1.17
PSEN1-221ENST00000557293 IGKV2-24A0A0C4DH68 120 aa7.73□□□□□ -1.17
PSEN1-221ENST00000557293 NDUFS6O75380 124 aaKnown RBP7.73□□□□□ -1.17
PSEN1-221ENST00000557293 RPS10P46783 165 aaKnown RBP7.73□□□□□ -1.17
PSEN1-221ENST00000557293 IQCJQ1A5X6 159 aa7.73□□□□□ -1.17
PSEN1-221ENST00000557293 ZNF674Q2M3X9 581 aa7.73□□□□□ -1.17
PSEN1-221ENST00000557293 LINC01559Q495D7 138 aa7.73□□□□□ -1.17
PSEN1-221ENST00000557293 TMEM97Q5BJF2 176 aa7.73□□□□□ -1.17
PSEN1-221ENST00000557293 Q86TA4 180 aa7.73□□□□□ -1.17
PSEN1-221ENST00000557293 INO80EQ8NBZ0 244 aaPredicted RBP7.73□□□□□ -1.17
PSEN1-221ENST00000557293 DERL1Q9BUN8 251 aa7.73□□□□□ -1.17
PSEN1-221ENST00000557293 A0A096LNI7 61 aa7.72□□□□□ -1.17
PSEN1-221ENST00000557293 FAM240BA0A1B0GVZ2 78 aa7.72□□□□□ -1.17
PSEN1-221ENST00000557293 A0A1W2PRE2 83 aa7.72□□□□□ -1.17
PSEN1-221ENST00000557293 GZMBP10144 247 aa7.72□□□□□ -1.17
PSEN1-221ENST00000557293 ZNF56Q15929 161 aa7.72□□□□□ -1.17
PSEN1-221ENST00000557293 TMEM167BQ9NRX6 74 aa7.72□□□□□ -1.17
PSEN1-221ENST00000557293 FAT4Q6V0I7 4981 aa7.71□□□□□ -1.17
PSEN1-221ENST00000557293 TRBV25-1A0A075B6N4 114 aa7.71□□□□□ -1.18
PSEN1-221ENST00000557293 A0A1B0GUV1 79 aa7.71□□□□□ -1.18
PSEN1-221ENST00000557293 OR10AG1Q8NH19 301 aa7.71□□□□□ -1.18
PSEN1-221ENST00000557293 PEX7O00628 323 aa7.7□□□□□ -1.18
PSEN1-221ENST00000557293 CXorf1O96002 111 aa7.7□□□□□ -1.18
PSEN1-221ENST00000557293 ATP6V0CP27449 155 aa7.7□□□□□ -1.18
PSEN1-221ENST00000557293 FAM162BQ5T6X4 162 aa7.7□□□□□ -1.18
PSEN1-221ENST00000557293 ZFP30Q9Y2G7 519 aa7.7□□□□□ -1.18
PSEN1-221ENST00000557293 IGHV1-24A0A0C4DH33 117 aa7.69□□□□□ -1.18
PSEN1-221ENST00000557293 H7C1H1 209 aa7.69□□□□□ -1.18
PSEN1-221ENST00000557293 IFNA7P01567 189 aa7.69□□□□□ -1.18
PSEN1-221ENST00000557293 Q6ZRP5 223 aa7.69□□□□□ -1.18
PSEN1-221ENST00000557293 SSBP4Q9BWG4 385 aaPredicted RBP7.69□□□□□ -1.18
PSEN1-221ENST00000557293 GAGE12HA6NDE8 117 aa7.68□□□□□ -1.18
PSEN1-221ENST00000557293 ZNF726P1Q15940 193 aa7.68□□□□□ -1.18
PSEN1-221ENST00000557293 HIGD2BQ4VC39 106 aa7.68□□□□□ -1.18
PSEN1-221ENST00000557293 SREK1IP1Q8N9Q2 155 aaPredicted RBP7.68□□□□□ -1.18
PSEN1-221ENST00000557293 PSMG3Q9BT73 122 aaPredicted RBP7.68□□□□□ -1.18
PSEN1-221ENST00000557293 MUC21A0A140T8X8 626 aa7.67□□□□□ -1.18
PSEN1-221ENST00000557293 FAM74A7A6NL05 159 aa7.67□□□□□ -1.18
PSEN1-221ENST00000557293 F5H697 171 aa7.67□□□□□ -1.18
PSEN1-221ENST00000557293 SNAI2O43623 268 aa7.67□□□□□ -1.18
PSEN1-221ENST00000557293 UBE2G2P60604 165 aa7.67□□□□□ -1.18
PSEN1-221ENST00000557293 HIST1H2BAQ96A08 127 aa7.67□□□□□ -1.18
PSEN1-221ENST00000557293 AQP10Q96PS8 301 aa7.67□□□□□ -1.18
PSEN1-221ENST00000557293 ZNF471Q9BX82 626 aaPredicted RBP7.67□□□□□ -1.18
PSEN1-221ENST00000557293 M0QY20 66 aa7.66□□□□□ -1.18
PSEN1-221ENST00000557293 LTAP01374 205 aa7.66□□□□□ -1.18
PSEN1-221ENST00000557293 CFAP161Q6P656 301 aa7.66□□□□□ -1.18
PSEN1-221ENST00000557293 CCDC32Q9BV29 185 aa7.66□□□□□ -1.18
PSEN1-221ENST00000557293 ACTR3CQ9C0K3 210 aaPredicted RBP7.66□□□□□ -1.18
PSEN1-221ENST00000557293 TNFSF18Q9UNG2 199 aa7.66□□□□□ -1.18
PSEN1-221ENST00000557293 FAM231BA6NCW3 169 aa7.65□□□□□ -1.18
PSEN1-221ENST00000557293 DEFA3P59666 94 aa7.65□□□□□ -1.18
PSEN1-221ENST00000557293 SERF2P84101 59 aa7.65□□□□□ -1.18
PSEN1-221ENST00000557293 MZT2BQ6NZ67 158 aa7.65□□□□□ -1.18
PSEN1-221ENST00000557293 PRR26Q8N8Z3 221 aa7.65□□□□□ -1.18
PSEN1-221ENST00000557293 GVQW2A0A096LPI5 108 aaPredicted RBP7.64□□□□□ -1.19
PSEN1-221ENST00000557293 MBP02144 154 aa7.64□□□□□ -1.19
PSEN1-221ENST00000557293 CXCL1P09341 107 aa7.64□□□□□ -1.19
PSEN1-221ENST00000557293 OR5AL1P0C617 328 aa7.64□□□□□ -1.19
PSEN1-221ENST00000557293 PET100P0DJ07 73 aa7.64□□□□□ -1.19
PSEN1-221ENST00000557293 FMC1Q96HJ9 113 aa7.64□□□□□ -1.19
PSEN1-221ENST00000557293 TMEM243Q9BU79 118 aa7.64□□□□□ -1.19
PSEN1-221ENST00000557293 INMT-MINDY4F8WBC2 141 aa7.63□□□□□ -1.19
PSEN1-221ENST00000557293 SSTP61278 116 aa7.63□□□□□ -1.19
PSEN1-221ENST00000557293 PSORS1C2Q9UIG4 136 aa7.63□□□□□ -1.19
PSEN1-221ENST00000557293 A0A0U1RQV1 116 aa7.62□□□□□ -1.19
PSEN1-221ENST00000557293 A6NHS1 94 aa7.62□□□□□ -1.19
PSEN1-221ENST00000557293 SULT1A2P50226 295 aa7.62□□□□□ -1.19
PSEN1-221ENST00000557293 SPANXN1Q5VSR9 72 aa7.62□□□□□ -1.19
PSEN1-221ENST00000557293 ZNF664Q8N3J9 261 aa7.62□□□□□ -1.19
PSEN1-221ENST00000557293 LINC00526Q96FQ7 95 aa7.62□□□□□ -1.19
PSEN1-221ENST00000557293 NKX6-2Q9C056 277 aaPredicted RBP7.62□□□□□ -1.19
PSEN1-221ENST00000557293 LINC00474Q9P2X8 69 aa7.62□□□□□ -1.19
PSEN1-221ENST00000557293 A0A1W2PNN7 141 aa7.61□□□□□ -1.19
PSEN1-221ENST00000557293 UBE2G1P62253 170 aa7.61□□□□□ -1.19
PSEN1-221ENST00000557293 IFITM3Q01628 133 aa7.61□□□□□ -1.19
PSEN1-221ENST00000557293 CHCHD10Q8WYQ3 142 aaPredicted RBP7.61□□□□□ -1.19
PSEN1-221ENST00000557293 MLST8Q9BVC4 326 aa7.61□□□□□ -1.19
PSEN1-221ENST00000557293 IGKV3OR2-268A0A0C4DH90 116 aa7.6□□□□□ -1.19
PSEN1-221ENST00000557293 CTXND1A0A1B0GTU2 59 aa7.6□□□□□ -1.19
PSEN1-221ENST00000557293 NKX2-5P52952 324 aaPredicted RBP7.6□□□□□ -1.19
PSEN1-221ENST00000557293 FOXI1Q12951 378 aa7.6□□□□□ -1.19
PSEN1-221ENST00000557293 SUMO4Q6EEV6 95 aa7.6□□□□□ -1.19
PSEN1-221ENST00000557293 PGLYRP4Q96LB8 373 aa7.6□□□□□ -1.19
PSEN1-221ENST00000557293 MARVELD1Q9BSK0 173 aa7.6□□□□□ -1.19
PSEN1-221ENST00000557293 ENKURQ8TC29 256 aa7.59□□□□□ -1.19
PSEN1-221ENST00000557293 SSNA1O43805 119 aa7.58□□□□□ -1.2
PSEN1-221ENST00000557293 SMIM17P0DL12 118 aa7.57□□□□□ -1.2
PSEN1-221ENST00000557293 FHITP49789 147 aa7.57□□□□□ -1.2
PSEN1-221ENST00000557293 PTTG1IPP53801 180 aa7.57□□□□□ -1.2
PSEN1-221ENST00000557293 PRR4Q16378 134 aa7.57□□□□□ -1.2
PSEN1-221ENST00000557293 RASL11AQ6T310 242 aa7.57□□□□□ -1.2
PSEN1-221ENST00000557293 AP1S3Q96PC3 154 aa7.57□□□□□ -1.2
PSEN1-221ENST00000557293 TRAV26-2A0A0B4J265 109 aa7.56□□□□□ -1.2
PSEN1-221ENST00000557293 MGPP08493 103 aa7.56□□□□□ -1.2
PSEN1-221ENST00000557293 AKR1C3P42330 323 aa7.56□□□□□ -1.2
PSEN1-221ENST00000557293 AMTP48728 403 aa7.56□□□□□ -1.2
PSEN1-221ENST00000557293 CACNG7P62955 275 aa7.56□□□□□ -1.2
PSEN1-221ENST00000557293 RPL7L1Q6DKI1 246 aaKnown RBP7.56□□□□□ -1.2
PSEN1-221ENST00000557293 CARD19Q96LW7 228 aa7.56□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms