RNA–Protein interactions for RNA: ENST00000557275.5

SYNE3-205, Transcript of spectrin repeat containing nuclear envelope family member 3, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SYNE3, Length 13,488 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3-205ENST00000557275 SPATA12Q7Z6I5 190 aa6.93□□□□□ -1.3
SYNE3-205ENST00000557275 UNQ6494/PRO21346Q6UXR6 183 aa6.93□□□□□ -1.3
SYNE3-205ENST00000557275 DEFB104AQ8WTQ1 72 aa6.93□□□□□ -1.3
SYNE3-205ENST00000557275 KAAG1Q9UBP8 84 aa6.93□□□□□ -1.3
SYNE3-205ENST00000557275 IGHV4OR15-8A0A075B7B6 117 aa6.92□□□□□ -1.3
SYNE3-205ENST00000557275 A0A087WW49 117 aa6.92□□□□□ -1.3
SYNE3-205ENST00000557275 P0DMU3 169 aa6.92□□□□□ -1.3
SYNE3-205ENST00000557275 FAM231AP0DMU4 169 aa6.92□□□□□ -1.3
SYNE3-205ENST00000557275 FAM231CP0DMU5 169 aa6.92□□□□□ -1.3
SYNE3-205ENST00000557275 LYPD3O95274 346 aa6.92□□□□□ -1.3
SYNE3-205ENST00000557275 IGKV2D-29A0A075B6S2 120 aaPredicted RBP6.92□□□□□ -1.3
SYNE3-205ENST00000557275 IGKV2-29A2NJV5 120 aaPredicted RBP6.92□□□□□ -1.3
SYNE3-205ENST00000557275 SPAG11BQ08648 103 aa6.92□□□□□ -1.3
SYNE3-205ENST00000557275 PRR20EP86478 221 aa6.92□□□□□ -1.3
SYNE3-205ENST00000557275 PRR20CP86479 221 aa6.92□□□□□ -1.3
SYNE3-205ENST00000557275 PRR20DP86480 221 aa6.92□□□□□ -1.3
SYNE3-205ENST00000557275 PRR20BP86481 221 aa6.92□□□□□ -1.3
SYNE3-205ENST00000557275 PRR20AP86496 221 aa6.92□□□□□ -1.3
SYNE3-205ENST00000557275 WFDC2Q14508 124 aa6.92□□□□□ -1.3
SYNE3-205ENST00000557275 ATP1A1-AS1Q5TC04 95 aa6.91□□□□□ -1.3
SYNE3-205ENST00000557275 PRB1P04280 392 aa6.91□□□□□ -1.3
SYNE3-205ENST00000557275 FOXL2NBQ6ZUU3 175 aa6.91□□□□□ -1.3
SYNE3-205ENST00000557275 TCL1BO95988 128 aa6.91□□□□□ -1.3
SYNE3-205ENST00000557275 FAM222AQ5U5X8 452 aa6.91□□□□□ -1.3
SYNE3-205ENST00000557275 C5orf38Q86SI9 138 aa6.91□□□□□ -1.3
SYNE3-205ENST00000557275 Q9HAA7 133 aa6.91□□□□□ -1.3
SYNE3-205ENST00000557275 ADAMTS20P59510 1910 aa6.91□□□□□ -1.3
SYNE3-205ENST00000557275 INSL3P51460 131 aa6.91□□□□□ -1.3
SYNE3-205ENST00000557275 HHLA3Q9XRX5 114 aa6.9□□□□□ -1.3
SYNE3-205ENST00000557275 LRP4O75096 1905 aa6.9□□□□□ -1.3
SYNE3-205ENST00000557275 TMEM263Q8WUH6 116 aaKnown RBP6.9□□□□□ -1.3
SYNE3-205ENST00000557275 FXYD2P54710 66 aa6.9□□□□□ -1.3
SYNE3-205ENST00000557275 YPEL4Q96NS1 127 aa6.9□□□□□ -1.3
SYNE3-205ENST00000557275 RNASE13Q5GAN3 156 aaKnown RBP6.9□□□□□ -1.31
SYNE3-205ENST00000557275 PRYO14603 147 aa6.9□□□□□ -1.31
SYNE3-205ENST00000557275 LY6DQ14210 128 aa6.9□□□□□ -1.31
SYNE3-205ENST00000557275 IGKV2D-26A0A0A0MRZ7 120 aa6.9□□□□□ -1.31
SYNE3-205ENST00000557275 A0A0G2JNJ9 132 aa6.9□□□□□ -1.31
SYNE3-205ENST00000557275 IGFL4Q6B9Z1 124 aa6.9□□□□□ -1.31
SYNE3-205ENST00000557275 Q9UFV3 132 aa6.9□□□□□ -1.31
SYNE3-205ENST00000557275 FAM120AOSQ5T036 256 aa6.89□□□□□ -1.31
SYNE3-205ENST00000557275 DHRS4-AS1Q9P1J3 65 aa6.89□□□□□ -1.31
SYNE3-205ENST00000557275 CCL24O00175 119 aa6.89□□□□□ -1.31
SYNE3-205ENST00000557275 Q6ZRM9 215 aa6.89□□□□□ -1.31
SYNE3-205ENST00000557275 Q6ZS92 163 aa6.89□□□□□ -1.31
SYNE3-205ENST00000557275 LYNX1G3V0Z9 82 aa6.89□□□□□ -1.31
SYNE3-205ENST00000557275 IGLC6P0CF74 106 aa6.89□□□□□ -1.31
SYNE3-205ENST00000557275 LYNX1P0DP58 116 aa6.89□□□□□ -1.31
SYNE3-205ENST00000557275 COX7CP15954 63 aa6.89□□□□□ -1.31
SYNE3-205ENST00000557275 WT1-ASQ06250 92 aa6.89□□□□□ -1.31
SYNE3-205ENST00000557275 MIR7-3HGQ8N6C7 128 aa6.89□□□□□ -1.31
SYNE3-205ENST00000557275 ODF1Q14990 250 aa6.89□□□□□ -1.31
SYNE3-205ENST00000557275 IBA57-AS1B1ANH7 110 aa6.89□□□□□ -1.31
SYNE3-205ENST00000557275 Q6ZQT7 251 aa6.89□□□□□ -1.31
SYNE3-205ENST00000557275 ZNF491Q8N8L2 437 aa6.89□□□□□ -1.31
SYNE3-205ENST00000557275 PIK3CD-AS1Q5SR53 167 aa6.88□□□□□ -1.31
SYNE3-205ENST00000557275 PRRC2CQ9Y520 2896 aaKnown RBP6.88□□□□□ -1.31
SYNE3-205ENST00000557275 TRBV6-1A0A0K0K1D8 114 aa6.88□□□□□ -1.31
SYNE3-205ENST00000557275 TEX49A0A1B0GTD5 131 aa6.88□□□□□ -1.31
SYNE3-205ENST00000557275 TMEM89A2RUT3 159 aa6.88□□□□□ -1.31
SYNE3-205ENST00000557275 C9orf85Q96MD7 179 aa6.88□□□□□ -1.31
SYNE3-205ENST00000557275 RNASE8Q8TDE3 154 aaKnown RBP6.88□□□□□ -1.31
SYNE3-205ENST00000557275 CLEC2BQ92478 149 aa6.88□□□□□ -1.31
SYNE3-205ENST00000557275 IGF2RP11717 2491 aa6.88□□□□□ -1.31
SYNE3-205ENST00000557275 Q6Q795 121 aa6.87□□□□□ -1.31
SYNE3-205ENST00000557275 TGFBR3LH3BV60 316 aa6.87□□□□□ -1.31
SYNE3-205ENST00000557275 DAND5Q8N907 189 aa6.87□□□□□ -1.31
SYNE3-205ENST00000557275 A0A0G2JRQ6 117 aa6.87□□□□□ -1.31
SYNE3-205ENST00000557275 J3QKU1 62 aa6.87□□□□□ -1.31
SYNE3-205ENST00000557275 COX17Q14061 63 aa6.87□□□□□ -1.31
SYNE3-205ENST00000557275 SDIM1Q6ZPB5 146 aa6.87□□□□□ -1.31
SYNE3-205ENST00000557275 ENHOQ6UWT2 76 aa6.87□□□□□ -1.31
SYNE3-205ENST00000557275 ODF3Q96PU9 254 aa6.86□□□□□ -1.31
SYNE3-205ENST00000557275 TRBV30A0A0K0K1B3 111 aa6.86□□□□□ -1.31
SYNE3-205ENST00000557275 K7EN84 100 aa6.86□□□□□ -1.31
SYNE3-205ENST00000557275 C7orf33Q8WU49 177 aa6.86□□□□□ -1.31
SYNE3-205ENST00000557275 CENPVL3A0A0U1RRI6 287 aa6.86□□□□□ -1.31
SYNE3-205ENST00000557275 IGLV10-54A0A075B6I4 117 aa6.86□□□□□ -1.31
SYNE3-205ENST00000557275 NCR3O14931 201 aa6.86□□□□□ -1.31
SYNE3-205ENST00000557275 LOXP28300 417 aaPredicted RBP6.86□□□□□ -1.31
SYNE3-205ENST00000557275 WFDC10BQ8IUB3 73 aa6.85□□□□□ -1.31
SYNE3-205ENST00000557275 CSDC2Q9Y534 153 aaKnown RBP6.85□□□□□ -1.31
SYNE3-205ENST00000557275 ZNF726P1Q15940 193 aa6.85□□□□□ -1.31
SYNE3-205ENST00000557275 K7EMT4 169 aa6.85□□□□□ -1.31
SYNE3-205ENST00000557275 CCKP06307 115 aa6.85□□□□□ -1.31
SYNE3-205ENST00000557275 LINC00474Q9P2X8 69 aa6.85□□□□□ -1.31
SYNE3-205ENST00000557275 A0A0J9YXV3 536 aa6.85□□□□□ -1.31
SYNE3-205ENST00000557275 ASPHD1Q5U4P2 390 aa6.85□□□□□ -1.31
SYNE3-205ENST00000557275 IGHV3-30-3P0DP02 117 aa6.85□□□□□ -1.31
SYNE3-205ENST00000557275 DEFB112Q30KQ8 113 aa6.85□□□□□ -1.31
SYNE3-205ENST00000557275 GP9P14770 177 aa6.85□□□□□ -1.31
SYNE3-205ENST00000557275 AGPAT4-IT1Q9H0P7 198 aa6.85□□□□□ -1.31
SYNE3-205ENST00000557275 FHL1Q13642 323 aa6.85□□□□□ -1.31
SYNE3-205ENST00000557275 NPBQ8NG41 125 aa6.84□□□□□ -1.31
SYNE3-205ENST00000557275 WDR86Q86TI4 376 aa6.84□□□□□ -1.31
SYNE3-205ENST00000557275 RPL39LQ96EH5 51 aaKnown RBP6.84□□□□□ -1.31
SYNE3-205ENST00000557275 PRO0255Q9UI72 69 aa6.84□□□□□ -1.31
SYNE3-205ENST00000557275 GTSF1Q8WW33 167 aa6.84□□□□□ -1.31
SYNE3-205ENST00000557275 GNRH2O43555 120 aa6.84□□□□□ -1.32
SYNE3-205ENST00000557275 SMIM9A6NGZ8 99 aa6.84□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms