RNA–Protein interactions for RNA: ENST00000557261.1

FOXN3-215, Transcript of forkhead box N3, humanhuman

TSL 4

Gene FOXN3, Length 625 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-215ENST00000557261 HNRNPA3P51991 378 aaKnown RBP4.32□□□□□ -1.72
FOXN3-215ENST00000557261 ERCC8Q13216 396 aa4.32□□□□□ -1.72
FOXN3-215ENST00000557261 AMTNQ6UX39 209 aa4.32□□□□□ -1.72
FOXN3-215ENST00000557261 ZNF493Q6ZR52 646 aa4.32□□□□□ -1.72
FOXN3-215ENST00000557261 BORCS7Q96B45 105 aa4.32□□□□□ -1.72
FOXN3-215ENST00000557261 KCNS1Q96KK3 526 aa4.32□□□□□ -1.72
FOXN3-215ENST00000557261 DUX3Q96PT4 197 aa4.32□□□□□ -1.72
FOXN3-215ENST00000557261 LINC00467Q9BRT7 94 aa4.32□□□□□ -1.72
FOXN3-215ENST00000557261 TP53TG3Q9ULZ0 132 aa4.32□□□□□ -1.72
FOXN3-215ENST00000557261 TENM1Q9UKZ4 2725 aa4.31□□□□□ -1.72
FOXN3-215ENST00000557261 IGKV2D-30A0A075B6S6 120 aa4.31□□□□□ -1.72
FOXN3-215ENST00000557261 IGKV3D-20A0A0C4DH25 116 aa4.31□□□□□ -1.72
FOXN3-215ENST00000557261 C7orf71A4D174 169 aa4.31□□□□□ -1.72
FOXN3-215ENST00000557261 OR11H12B2RN74 326 aa4.31□□□□□ -1.72
FOXN3-215ENST00000557261 H3BMM0 161 aa4.31□□□□□ -1.72
FOXN3-215ENST00000557261 HIST1H2BKO60814 126 aa4.31□□□□□ -1.72
FOXN3-215ENST00000557261 TRGC2P03986 189 aa4.31□□□□□ -1.72
FOXN3-215ENST00000557261 HIST1H2BJP06899 126 aa4.31□□□□□ -1.72
FOXN3-215ENST00000557261 GPX1P07203 203 aa4.31□□□□□ -1.72
FOXN3-215ENST00000557261 IGLL1P15814 213 aa4.31□□□□□ -1.72
FOXN3-215ENST00000557261 HIST1H2BOP23527 126 aa4.31□□□□□ -1.72
FOXN3-215ENST00000557261 HIST1H2BBP33778 126 aa4.31□□□□□ -1.72
FOXN3-215ENST00000557261 HIST1H2BDP58876 126 aa4.31□□□□□ -1.72
FOXN3-215ENST00000557261 HIST1H2BCP62807 126 aa4.31□□□□□ -1.72
FOXN3-215ENST00000557261 CACNG7P62955 275 aa4.31□□□□□ -1.72
FOXN3-215ENST00000557261 HIST2H2BEQ16778 126 aa4.31□□□□□ -1.72
FOXN3-215ENST00000557261 KRTAP24-1Q3LI83 254 aa4.31□□□□□ -1.72
FOXN3-215ENST00000557261 HIST2H2BFQ5QNW6 126 aaPredicted RBP4.31□□□□□ -1.72
FOXN3-215ENST00000557261 PRR9Q5T870 116 aa4.31□□□□□ -1.72
FOXN3-215ENST00000557261 Q6ZN92 141 aa4.31□□□□□ -1.72
FOXN3-215ENST00000557261 TMEM136Q6ZRR5 245 aa4.31□□□□□ -1.72
FOXN3-215ENST00000557261 FER1L6-AS1Q8NA97 138 aa4.31□□□□□ -1.72
FOXN3-215ENST00000557261 WFDC9Q8NEX5 89 aa4.31□□□□□ -1.72
FOXN3-215ENST00000557261 FRZBQ92765 325 aa4.31□□□□□ -1.72
FOXN3-215ENST00000557261 HIST1H2BHQ93079 126 aa4.31□□□□□ -1.72
FOXN3-215ENST00000557261 HIST1H2BNQ99877 126 aa4.31□□□□□ -1.72
FOXN3-215ENST00000557261 HIST1H2BMQ99879 126 aa4.31□□□□□ -1.72
FOXN3-215ENST00000557261 TRAPPC1Q9Y5R8 145 aa4.31□□□□□ -1.72
FOXN3-215ENST00000557261 WNK1Q9H4A3 2382 aa4.3□□□□□ -1.72
FOXN3-215ENST00000557261 IGKV3-7A0A075B6H7 116 aa4.3□□□□□ -1.72
FOXN3-215ENST00000557261 F6UB75 175 aa4.3□□□□□ -1.72
FOXN3-215ENST00000557261 ZNF324O75467 553 aaPredicted RBP4.3□□□□□ -1.72
FOXN3-215ENST00000557261 ORM1P02763 201 aa4.3□□□□□ -1.72
FOXN3-215ENST00000557261 S100A6P06703 90 aa4.3□□□□□ -1.72
FOXN3-215ENST00000557261 TCL1AP56279 114 aa4.3□□□□□ -1.72
FOXN3-215ENST00000557261 DEFB131AP59861 70 aa4.3□□□□□ -1.72
FOXN3-215ENST00000557261 OR10J3Q5JRS4 329 aa4.3□□□□□ -1.72
FOXN3-215ENST00000557261 GDF5OSQ5U4N7 250 aa4.3□□□□□ -1.72
FOXN3-215ENST00000557261 GFI1BQ5VTD9 330 aa4.3□□□□□ -1.72
FOXN3-215ENST00000557261 TMEM256Q8N2U0 113 aa4.3□□□□□ -1.72
FOXN3-215ENST00000557261 PACRGQ96M98 296 aaPredicted RBP4.3□□□□□ -1.72
FOXN3-215ENST00000557261 INSP01308 110 aa4.29□□□□□ -1.72
FOXN3-215ENST00000557261 TRGC1P0CF51 173 aa4.29□□□□□ -1.72
FOXN3-215ENST00000557261 ESDP10768 282 aa4.29□□□□□ -1.72
FOXN3-215ENST00000557261 ASIPP42127 132 aa4.29□□□□□ -1.72
FOXN3-215ENST00000557261 TFPI2P48307 235 aa4.29□□□□□ -1.72
FOXN3-215ENST00000557261 NUTF2P61970 127 aaKnown RBP4.29□□□□□ -1.72
FOXN3-215ENST00000557261 RPL32P62910 135 aaKnown RBP4.29□□□□□ -1.72
FOXN3-215ENST00000557261 Q0VG73 95 aa4.29□□□□□ -1.72
FOXN3-215ENST00000557261 FABP9Q0Z7S8 132 aa4.29□□□□□ -1.72
FOXN3-215ENST00000557261 MRPL54Q6P161 138 aaKnown RBP4.29□□□□□ -1.72
FOXN3-215ENST00000557261 MORN3Q6PF18 240 aaPredicted RBP4.29□□□□□ -1.72
FOXN3-215ENST00000557261 LINC00336Q6ZUF6 198 aa4.29□□□□□ -1.72
FOXN3-215ENST00000557261 BAALCQ8WXS3 180 aa4.29□□□□□ -1.72
FOXN3-215ENST00000557261 PTH2Q96A98 100 aa4.29□□□□□ -1.72
FOXN3-215ENST00000557261 TMEM191AQ9H0A3 160 aa4.29□□□□□ -1.72
FOXN3-215ENST00000557261 LAMTOR2Q9Y2Q5 125 aa4.29□□□□□ -1.72
FOXN3-215ENST00000557261 AGRNO00468 2067 aa4.28□□□□□ -1.72
FOXN3-215ENST00000557261 IGHV1OR15-1A0A075B7D0 117 aa4.28□□□□□ -1.72
FOXN3-215ENST00000557261 LOC102724200A0A096LPH7 203 aaPredicted RBP4.28□□□□□ -1.72
FOXN3-215ENST00000557261 CRXO43186 299 aaPredicted RBP4.28□□□□□ -1.72
FOXN3-215ENST00000557261 APCSP02743 223 aa4.28□□□□□ -1.72
FOXN3-215ENST00000557261 PPBPP02775 128 aa4.28□□□□□ -1.72
FOXN3-215ENST00000557261 ARMS2P0C7Q2 107 aa4.28□□□□□ -1.72
FOXN3-215ENST00000557261 ZNF705DP0CH99 300 aaPredicted RBP4.28□□□□□ -1.72
FOXN3-215ENST00000557261 ZNF705BP0CI00 300 aaPredicted RBP4.28□□□□□ -1.72
FOXN3-215ENST00000557261 LYZL1Q6UWQ5 148 aa4.28□□□□□ -1.72
FOXN3-215ENST00000557261 GTSCR1Q86UQ5 136 aa4.28□□□□□ -1.72
FOXN3-215ENST00000557261 ZFP82Q8N141 532 aa4.28□□□□□ -1.72
FOXN3-215ENST00000557261 Q8N377 158 aa4.28□□□□□ -1.72
FOXN3-215ENST00000557261 DEFB125Q8N687 156 aa4.28□□□□□ -1.72
FOXN3-215ENST00000557261 Q8N9P0 234 aaPredicted RBP4.28□□□□□ -1.72
FOXN3-215ENST00000557261 CMYA5Q8N3K9 4069 aa4.27□□□□□ -1.73
FOXN3-215ENST00000557261 TRRAPQ9Y4A5 3859 aa4.27□□□□□ -1.73
FOXN3-215ENST00000557261 A0A087WYN8 130 aa4.27□□□□□ -1.73
FOXN3-215ENST00000557261 LOC105371267A0A1B0GV96 52 aa4.27□□□□□ -1.73
FOXN3-215ENST00000557261 GZMBP10144 247 aa4.27□□□□□ -1.73
FOXN3-215ENST00000557261 RNASE3P12724 160 aaKnown RBP4.27□□□□□ -1.73
FOXN3-215ENST00000557261 RNASE4P34096 147 aaKnown RBP4.27□□□□□ -1.73
FOXN3-215ENST00000557261 DEFB1P60022 68 aa4.27□□□□□ -1.73
FOXN3-215ENST00000557261 SPINK13Q1W4C9 94 aa4.27□□□□□ -1.73
FOXN3-215ENST00000557261 FAM104BQ5XKR9 115 aa4.27□□□□□ -1.73
FOXN3-215ENST00000557261 SMIM15Q7Z3B0 74 aa4.27□□□□□ -1.73
FOXN3-215ENST00000557261 POM121L12Q8N7R1 296 aa4.27□□□□□ -1.73
FOXN3-215ENST00000557261 AP1S3Q96PC3 154 aa4.27□□□□□ -1.73
FOXN3-215ENST00000557261 MAP1LC3CQ9BXW4 147 aa4.27□□□□□ -1.73
FOXN3-215ENST00000557261 U3KQK5 164 aa4.27□□□□□ -1.73
FOXN3-215ENST00000557261 DNAH3Q8TD57 4116 aa4.27□□□□□ -1.73
FOXN3-215ENST00000557261 SORL1Q92673 2214 aa4.26□□□□□ -1.73
FOXN3-215ENST00000557261 TMSB15BA0A087X1C1 80 aa4.26□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms