RNA–Protein interactions for RNA: ENST00000556992.1

SRP54-212, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 529 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-212ENST00000556992 PLXNB1O43157 2135 aa3.26□□□□□ -1.89
SRP54-212ENST00000556992 IGHV3-16A0A0C4DH30 117 aa3.26□□□□□ -1.89
SRP54-212ENST00000556992 IGHV1-24A0A0C4DH33 117 aa3.26□□□□□ -1.89
SRP54-212ENST00000556992 LINC01546A6NGU7 62 aa3.26□□□□□ -1.89
SRP54-212ENST00000556992 KNCNA6PVL3 124 aa3.26□□□□□ -1.89
SRP54-212ENST00000556992 A8MTW9 85 aa3.26□□□□□ -1.89
SRP54-212ENST00000556992 OR11H12B2RN74 326 aa3.26□□□□□ -1.89
SRP54-212ENST00000556992 SYS1-DBNDD2H3BUS1 97 aa3.26□□□□□ -1.89
SRP54-212ENST00000556992 K7EMI3 77 aa3.26□□□□□ -1.89
SRP54-212ENST00000556992 M0R381 172 aa3.26□□□□□ -1.89
SRP54-212ENST00000556992 CRXO43186 299 aaPredicted RBP3.26□□□□□ -1.89
SRP54-212ENST00000556992 CRLF1O75462 422 aa3.26□□□□□ -1.89
SRP54-212ENST00000556992 NXPH4O95158 308 aa3.26□□□□□ -1.89
SRP54-212ENST00000556992 NPYP01303 97 aa3.26□□□□□ -1.89
SRP54-212ENST00000556992 CD7P09564 240 aa3.26□□□□□ -1.89
SRP54-212ENST00000556992 C3orf79P0CE67 100 aa3.26□□□□□ -1.89
SRP54-212ENST00000556992 G0S2P27469 103 aa3.26□□□□□ -1.89
SRP54-212ENST00000556992 NUTF2P61970 127 aaKnown RBP3.26□□□□□ -1.89
SRP54-212ENST00000556992 TEX43Q6ZNM6 134 aa3.26□□□□□ -1.89
SRP54-212ENST00000556992 Q6ZQT7 251 aa3.26□□□□□ -1.89
SRP54-212ENST00000556992 ZNF664Q8N3J9 261 aa3.26□□□□□ -1.89
SRP54-212ENST00000556992 POM121L12Q8N7R1 296 aa3.26□□□□□ -1.89
SRP54-212ENST00000556992 Q8N8P6 123 aa3.26□□□□□ -1.89
SRP54-212ENST00000556992 PTH2Q96A98 100 aa3.26□□□□□ -1.89
SRP54-212ENST00000556992 AP1S3Q96PC3 154 aa3.26□□□□□ -1.89
SRP54-212ENST00000556992 FAM110AQ9BQ89 295 aa3.26□□□□□ -1.89
SRP54-212ENST00000556992 C20orf144Q9BQM9 153 aa3.26□□□□□ -1.89
SRP54-212ENST00000556992 LINC00467Q9BRT7 94 aa3.26□□□□□ -1.89
SRP54-212ENST00000556992 VAMP8Q9BV40 100 aa3.26□□□□□ -1.89
SRP54-212ENST00000556992 DPH3P1Q9H4G8 78 aa3.26□□□□□ -1.89
SRP54-212ENST00000556992 TRAV12-2A0A075B6T6 113 aa3.25□□□□□ -1.89
SRP54-212ENST00000556992 TRAV9-2A0A087WT02 112 aa3.25□□□□□ -1.89
SRP54-212ENST00000556992 CBY3A6NI87 242 aa3.25□□□□□ -1.89
SRP54-212ENST00000556992 SMKR1H3BMG3 65 aa3.25□□□□□ -1.89
SRP54-212ENST00000556992 VCYO14598 125 aa3.25□□□□□ -1.89
SRP54-212ENST00000556992 SAP30O75446 220 aa3.25□□□□□ -1.89
SRP54-212ENST00000556992 IGLV1-51P01701 117 aa3.25□□□□□ -1.89
SRP54-212ENST00000556992 HBDP02042 147 aa3.25□□□□□ -1.89
SRP54-212ENST00000556992 RNASE3P12724 160 aaKnown RBP3.25□□□□□ -1.89
SRP54-212ENST00000556992 DDTP30046 118 aa3.25□□□□□ -1.89
SRP54-212ENST00000556992 FCER1GP30273 86 aa3.25□□□□□ -1.89
SRP54-212ENST00000556992 DEFA6Q01524 100 aa3.25□□□□□ -1.89
SRP54-212ENST00000556992 LAGE3Q14657 143 aa3.25□□□□□ -1.89
SRP54-212ENST00000556992 SPINK13Q1W4C9 94 aa3.25□□□□□ -1.89
SRP54-212ENST00000556992 NSUN5P1Q3KNT7 163 aa3.25□□□□□ -1.89
SRP54-212ENST00000556992 STHQ8IWL8 128 aa3.25□□□□□ -1.89
SRP54-212ENST00000556992 C14orf178Q8N769 122 aaPredicted RBP3.25□□□□□ -1.89
SRP54-212ENST00000556992 C9orf85Q96MD7 179 aa3.25□□□□□ -1.89
SRP54-212ENST00000556992 LINC01587Q99440 93 aa3.25□□□□□ -1.89
SRP54-212ENST00000556992 SPXQ9BT56 116 aa3.25□□□□□ -1.89
SRP54-212ENST00000556992 ZNF256Q9Y2P7 627 aaPredicted RBP3.25□□□□□ -1.89
SRP54-212ENST00000556992 TLN2Q9Y4G6 2542 aa3.25□□□□□ -1.89
SRP54-212ENST00000556992 LINC01549A6NIU2 74 aa3.24□□□□□ -1.89
SRP54-212ENST00000556992 LINC00587B1AMM8 73 aa3.24□□□□□ -1.89
SRP54-212ENST00000556992 HSBP1L1C9JCN9 74 aa3.24□□□□□ -1.89
SRP54-212ENST00000556992 TCAPO15273 167 aa3.24□□□□□ -1.89
SRP54-212ENST00000556992 ATP5LO75964 103 aa3.24□□□□□ -1.89
SRP54-212ENST00000556992 NCR2O95944 276 aa3.24□□□□□ -1.89
SRP54-212ENST00000556992 INSP01308 110 aa3.24□□□□□ -1.89
SRP54-212ENST00000556992 INSL3P51460 131 aa3.24□□□□□ -1.89
SRP54-212ENST00000556992 RPL32P62910 135 aaKnown RBP3.24□□□□□ -1.89
SRP54-212ENST00000556992 ZNF876PQ49A33 203 aa3.24□□□□□ -1.89
SRP54-212ENST00000556992 ORMDL2Q53FV1 153 aa3.24□□□□□ -1.89
SRP54-212ENST00000556992 Q8N976 141 aa3.24□□□□□ -1.89
SRP54-212ENST00000556992 MIEN1Q9BRT3 115 aa3.24□□□□□ -1.89
SRP54-212ENST00000556992 NDUFAF3Q9BU61 184 aa3.24□□□□□ -1.89
SRP54-212ENST00000556992 PRO1933Q9H354 126 aa3.24□□□□□ -1.89
SRP54-212ENST00000556992 ST20Q9HBF5 79 aa3.24□□□□□ -1.89
SRP54-212ENST00000556992 KIF25-AS1Q9Y6Z4 181 aa3.24□□□□□ -1.89
SRP54-212ENST00000556992 HIVEP2P31629 2446 aa3.24□□□□□ -1.89
SRP54-212ENST00000556992 MGAM2Q2M2H8 2515 aa3.24□□□□□ -1.89
SRP54-212ENST00000556992 TRAV26-2A0A0B4J265 109 aa3.23□□□□□ -1.89
SRP54-212ENST00000556992 A8MWV9 139 aa3.23□□□□□ -1.89
SRP54-212ENST00000556992 H7C1H1 209 aa3.23□□□□□ -1.89
SRP54-212ENST00000556992 M0R2P5 195 aa3.23□□□□□ -1.89
SRP54-212ENST00000556992 PRSS1P07477 247 aa3.23□□□□□ -1.89
SRP54-212ENST00000556992 MGPP08493 103 aa3.23□□□□□ -1.89
SRP54-212ENST00000556992 HTN1P15515 57 aa3.23□□□□□ -1.89
SRP54-212ENST00000556992 GATA1P15976 413 aaPredicted RBP3.23□□□□□ -1.89
SRP54-212ENST00000556992 FXYD7P58549 80 aa3.23□□□□□ -1.89
SRP54-212ENST00000556992 LINC00315P59091 139 aa3.23□□□□□ -1.89
SRP54-212ENST00000556992 MORN3Q6PF18 240 aaPredicted RBP3.23□□□□□ -1.89
SRP54-212ENST00000556992 ZNF705AQ6ZN79 300 aaPredicted RBP3.23□□□□□ -1.89
SRP54-212ENST00000556992 TRPT1Q86TN4 253 aaKnown RBP3.23□□□□□ -1.89
SRP54-212ENST00000556992 RASL10AQ92737 203 aa3.23□□□□□ -1.89
SRP54-212ENST00000556992 IFI27L1Q96BM0 104 aa3.23□□□□□ -1.89
SRP54-212ENST00000556992 TMEM208Q9BTX3 173 aa3.23□□□□□ -1.89
SRP54-212ENST00000556992 MCRIP2Q9BUT9 160 aaKnown RBP3.23□□□□□ -1.89
SRP54-212ENST00000556992 C1QTNF4Q9BXJ3 329 aa3.23□□□□□ -1.89
SRP54-212ENST00000556992 TRRAPQ9Y4A5 3859 aa3.23□□□□□ -1.89
SRP54-212ENST00000556992 IGLV2-18A0A075B6J9 118 aa3.22□□□□□ -1.89
SRP54-212ENST00000556992 KIR2DL5BA0A0G2JN68 375 aa3.22□□□□□ -1.89
SRP54-212ENST00000556992 KIR2DL5BA0A0G2JPC4 375 aa3.22□□□□□ -1.89
SRP54-212ENST00000556992 TRBV6-5A0A0K0K1A5 114 aa3.22□□□□□ -1.89
SRP54-212ENST00000556992 RBMY1BA6NDE4 496 aaKnown RBP3.22□□□□□ -1.89
SRP54-212ENST00000556992 RBMY1EA6NEQ0 496 aaKnown RBP3.22□□□□□ -1.89
SRP54-212ENST00000556992 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP3.22□□□□□ -1.89
SRP54-212ENST00000556992 M0QY20 66 aa3.22□□□□□ -1.89
SRP54-212ENST00000556992 CRYGDP07320 174 aa3.22□□□□□ -1.89
SRP54-212ENST00000556992 RBMY1DP0C7P1 496 aaKnown RBP3.22□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 76.4 ms