RNA–Protein interactions for RNA: ENST00000556718.1

PRPF39-210, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 3

Gene PRPF39, Length 499 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-210ENST00000556718 RBP4P02753 201 aa2.39□□□□□ -2.03
PRPF39-210ENST00000556718 CRYGAP11844 174 aa2.39□□□□□ -2.03
PRPF39-210ENST00000556718 COX7CP15954 63 aa2.39□□□□□ -2.03
PRPF39-210ENST00000556718 CD52P31358 61 aa2.39□□□□□ -2.03
PRPF39-210ENST00000556718 MRPS36P82909 103 aaKnown RBP2.39□□□□□ -2.03
PRPF39-210ENST00000556718 PLGLAQ15195 96 aa2.39□□□□□ -2.03
PRPF39-210ENST00000556718 C4orf26Q17RF5 130 aa2.39□□□□□ -2.03
PRPF39-210ENST00000556718 TMEM155Q4W5P6 130 aa2.39□□□□□ -2.03
PRPF39-210ENST00000556718 GDF5OSQ5U4N7 250 aa2.39□□□□□ -2.03
PRPF39-210ENST00000556718 MIC13Q5XKP0 118 aa2.39□□□□□ -2.03
PRPF39-210ENST00000556718 GOLT1AQ6ZVE7 132 aa2.39□□□□□ -2.03
PRPF39-210ENST00000556718 LINC00643Q86TS7 51 aa2.39□□□□□ -2.03
PRPF39-210ENST00000556718 LYPD1Q8N2G4 141 aa2.39□□□□□ -2.03
PRPF39-210ENST00000556718 WFDC5Q8TCV5 224 aa2.39□□□□□ -2.03
PRPF39-210ENST00000556718 UBE2WQ96B02 151 aa2.39□□□□□ -2.03
PRPF39-210ENST00000556718 CARD19Q96LW7 228 aa2.39□□□□□ -2.03
PRPF39-210ENST00000556718 LINC01600Q96MT4 127 aa2.39□□□□□ -2.03
PRPF39-210ENST00000556718 TRGV9Q99603 122 aa2.39□□□□□ -2.03
PRPF39-210ENST00000556718 NABP2Q9BQ15 211 aa2.39□□□□□ -2.03
PRPF39-210ENST00000556718 DYNLRB1Q9NP97 96 aa2.39□□□□□ -2.03
PRPF39-210ENST00000556718 PRO1854Q9UHT4 67 aa2.39□□□□□ -2.03
PRPF39-210ENST00000556718 PLXNA2O75051 1894 aa2.39□□□□□ -2.03
PRPF39-210ENST00000556718 C4orf51C9J302 202 aa2.38□□□□□ -2.03
PRPF39-210ENST00000556718 H3BT86 120 aa2.38□□□□□ -2.03
PRPF39-210ENST00000556718 IGKV1-17P01599 117 aa2.38□□□□□ -2.03
PRPF39-210ENST00000556718 CD7P09564 240 aa2.38□□□□□ -2.03
PRPF39-210ENST00000556718 INAFM2P0DMQ5 153 aa2.38□□□□□ -2.03
PRPF39-210ENST00000556718 P0DMU3 169 aa2.38□□□□□ -2.03
PRPF39-210ENST00000556718 FAM231AP0DMU4 169 aa2.38□□□□□ -2.03
PRPF39-210ENST00000556718 FAM231CP0DMU5 169 aa2.38□□□□□ -2.03
PRPF39-210ENST00000556718 CKS2P33552 79 aa2.38□□□□□ -2.03
PRPF39-210ENST00000556718 IFI27P40305 119 aaPredicted RBP2.38□□□□□ -2.03
PRPF39-210ENST00000556718 ZNF137PP52743 207 aa2.38□□□□□ -2.03
PRPF39-210ENST00000556718 DSCR4P56555 118 aaPredicted RBP2.38□□□□□ -2.03
PRPF39-210ENST00000556718 UBE2D3P61077 147 aa2.38□□□□□ -2.03
PRPF39-210ENST00000556718 UBE2D2P62837 147 aa2.38□□□□□ -2.03
PRPF39-210ENST00000556718 CCL8P80075 99 aa2.38□□□□□ -2.03
PRPF39-210ENST00000556718 SPRNQ5BIV9 151 aa2.38□□□□□ -2.03
PRPF39-210ENST00000556718 C10orf128Q5T292 105 aa2.38□□□□□ -2.03
PRPF39-210ENST00000556718 C1orf195Q5TG92 126 aa2.38□□□□□ -2.03
PRPF39-210ENST00000556718 FAM27BQ5VT28 67 aa2.38□□□□□ -2.03
PRPF39-210ENST00000556718 C10orf113Q5VZT2 155 aa2.38□□□□□ -2.03
PRPF39-210ENST00000556718 MIR17HGQ75NE6 70 aa2.38□□□□□ -2.03
PRPF39-210ENST00000556718 DPH3Q96FX2 82 aa2.38□□□□□ -2.03
PRPF39-210ENST00000556718 B9D2Q9BPU9 175 aa2.38□□□□□ -2.03
PRPF39-210ENST00000556718 RPUSD1Q9UJJ7 312 aaKnown RBP2.38□□□□□ -2.03
PRPF39-210ENST00000556718 PHLDA3Q9Y5J5 127 aa2.38□□□□□ -2.03
PRPF39-210ENST00000556718 U3KQK5 164 aa2.38□□□□□ -2.03
PRPF39-210ENST00000556718 NUP210Q8TEM1 1887 aaPredicted RBP2.37□□□□□ -2.03
PRPF39-210ENST00000556718 IGKV1D-17A0A075B6S4 117 aa2.37□□□□□ -2.03
PRPF39-210ENST00000556718 TRAV12-1A0A0B4J245 112 aa2.37□□□□□ -2.03
PRPF39-210ENST00000556718 TRBV10-2A0A0K0K1G8 114 aa2.37□□□□□ -2.03
PRPF39-210ENST00000556718 LOC107984640A0A0U1RRK4 108 aa2.37□□□□□ -2.03
PRPF39-210ENST00000556718 TMEM30CPA0ZSE6 113 aa2.37□□□□□ -2.03
PRPF39-210ENST00000556718 K7EMI3 77 aa2.37□□□□□ -2.03
PRPF39-210ENST00000556718 OVOL1O14753 267 aa2.37□□□□□ -2.03
PRPF39-210ENST00000556718 SH2D1AO60880 128 aa2.37□□□□□ -2.03
PRPF39-210ENST00000556718 PYYP10082 97 aa2.37□□□□□ -2.03
PRPF39-210ENST00000556718 COX6A1P12074 109 aa2.37□□□□□ -2.03
PRPF39-210ENST00000556718 UBE2D1P51668 147 aa2.37□□□□□ -2.03
PRPF39-210ENST00000556718 NPC2P61916 151 aa2.37□□□□□ -2.03
PRPF39-210ENST00000556718 ERHP84090 104 aaKnown RBP2.37□□□□□ -2.03
PRPF39-210ENST00000556718 NNATQ16517 81 aa2.37□□□□□ -2.03
PRPF39-210ENST00000556718 C2orf82Q6UX34 121 aa2.37□□□□□ -2.03
PRPF39-210ENST00000556718 PLEKHB2Q96CS7 222 aa2.37□□□□□ -2.03
PRPF39-210ENST00000556718 ZNF714Q96N38 554 aa2.37□□□□□ -2.03
PRPF39-210ENST00000556718 AGPAT4-IT1Q9H0P7 198 aa2.37□□□□□ -2.03
PRPF39-210ENST00000556718 OTORQ9NRC9 128 aa2.37□□□□□ -2.03
PRPF39-210ENST00000556718 TP73-AS1Q9UF72 201 aa2.37□□□□□ -2.03
PRPF39-210ENST00000556718 PLXNA4Q9HCM2 1894 aa2.37□□□□□ -2.03
PRPF39-210ENST00000556718 DENND4CQ5VZ89 1909 aa2.36□□□□□ -2.03
PRPF39-210ENST00000556718 TRBV7-3A0A075B6L6 115 aa2.36□□□□□ -2.03
PRPF39-210ENST00000556718 TRAV12-2A0A075B6T6 113 aa2.36□□□□□ -2.03
PRPF39-210ENST00000556718 TMSB15BA0A087X1C1 80 aa2.36□□□□□ -2.03
PRPF39-210ENST00000556718 TRAV17A0A0B4J275 112 aa2.36□□□□□ -2.03
PRPF39-210ENST00000556718 IGKV2-24A0A0C4DH68 120 aa2.36□□□□□ -2.03
PRPF39-210ENST00000556718 IGKV1-12A0A0C4DH73 117 aa2.36□□□□□ -2.03
PRPF39-210ENST00000556718 A0A0J9YW62 118 aa2.36□□□□□ -2.03
PRPF39-210ENST00000556718 FAM236AA0A1B0GUQ0 79 aa2.36□□□□□ -2.03
PRPF39-210ENST00000556718 FAM236BA0A1B0GV22 79 aa2.36□□□□□ -2.03
PRPF39-210ENST00000556718 C19orf71A6NCJ1 209 aa2.36□□□□□ -2.03
PRPF39-210ENST00000556718 LINC01546A6NGU7 62 aa2.36□□□□□ -2.03
PRPF39-210ENST00000556718 ZNF815PA8K554 130 aa2.36□□□□□ -2.03
PRPF39-210ENST00000556718 OOSP1A8MZH6 123 aa2.36□□□□□ -2.03
PRPF39-210ENST00000556718 PPP1R17O96001 155 aa2.36□□□□□ -2.03
PRPF39-210ENST00000556718 IGKV1D-12P01611 117 aa2.36□□□□□ -2.03
PRPF39-210ENST00000556718 CGB3P0DN86 165 aa2.36□□□□□ -2.03
PRPF39-210ENST00000556718 CGB7P0DN87 165 aa2.36□□□□□ -2.03
PRPF39-210ENST00000556718 CYBAP13498 195 aa2.36□□□□□ -2.03
PRPF39-210ENST00000556718 CRYGSP22914 178 aa2.36□□□□□ -2.03
PRPF39-210ENST00000556718 PSMB8P28062 276 aa2.36□□□□□ -2.03
PRPF39-210ENST00000556718 DEFB121Q5J5C9 76 aa2.36□□□□□ -2.03
PRPF39-210ENST00000556718 HRCT1Q6UXD1 115 aa2.36□□□□□ -2.03
PRPF39-210ENST00000556718 RPS19BP1Q86WX3 136 aaKnown RBP2.36□□□□□ -2.03
PRPF39-210ENST00000556718 NDUFA11Q86Y39 141 aa2.36□□□□□ -2.03
PRPF39-210ENST00000556718 Q8N8P6 123 aa2.36□□□□□ -2.03
PRPF39-210ENST00000556718 HHLA3Q9XRX5 114 aa2.36□□□□□ -2.03
PRPF39-210ENST00000556718 SERP1Q9Y6X1 66 aa2.36□□□□□ -2.03
PRPF39-210ENST00000556718 NLRC5Q86WI3 1866 aa2.36□□□□□ -2.03
PRPF39-210ENST00000556718 KMT2EQ8IZD2 1858 aa2.36□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms