RNA–Protein interactions for RNA: ENST00000556689.5

SHMT2-223, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 3

Gene SHMT2, Length 768 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-223ENST00000556689 C9JQL5 133 aa8.28□□□□□ -1.08
SHMT2-223ENST00000556689 SNAPINO95295 136 aa8.28□□□□□ -1.08
SHMT2-223ENST00000556689 IGLV2-11P01706 119 aa8.28□□□□□ -1.08
SHMT2-223ENST00000556689 IGLV2-8P01709 118 aa8.28□□□□□ -1.08
SHMT2-223ENST00000556689 GAGE1Q13065 139 aa8.28□□□□□ -1.08
SHMT2-223ENST00000556689 GAGE4Q13068 117 aa8.28□□□□□ -1.08
SHMT2-223ENST00000556689 GAGE5Q13069 117 aa8.28□□□□□ -1.08
SHMT2-223ENST00000556689 GAGE13Q4V321 117 aa8.28□□□□□ -1.08
SHMT2-223ENST00000556689 PPP1R2P9O14990 202 aa8.27□□□□□ -1.09
SHMT2-223ENST00000556689 P01737 135 aa8.27□□□□□ -1.09
SHMT2-223ENST00000556689 APOC3P02656 99 aa8.27□□□□□ -1.09
SHMT2-223ENST00000556689 LINC01551Q86U37 167 aa8.27□□□□□ -1.09
SHMT2-223ENST00000556689 C9orf85Q96MD7 179 aa8.27□□□□□ -1.09
SHMT2-223ENST00000556689 CARHSP1Q9Y2V2 147 aaKnown RBP8.27□□□□□ -1.09
SHMT2-223ENST00000556689 URGCP-MRPS24S4R325 110 aa8.27□□□□□ -1.09
SHMT2-223ENST00000556689 TRBV20OR9-2A0A075B6H5 130 aa8.26□□□□□ -1.09
SHMT2-223ENST00000556689 IGKV2D-24A0A075B6R9 120 aa8.26□□□□□ -1.09
SHMT2-223ENST00000556689 FABP5P3A8MUU1 101 aa8.26□□□□□ -1.09
SHMT2-223ENST00000556689 MT-ND4LP03901 98 aa8.26□□□□□ -1.09
SHMT2-223ENST00000556689 S100A1P23297 94 aa8.26□□□□□ -1.09
SHMT2-223ENST00000556689 ZNF80P51504 273 aaPredicted RBP8.26□□□□□ -1.09
SHMT2-223ENST00000556689 RHEBQ15382 184 aa8.26□□□□□ -1.09
SHMT2-223ENST00000556689 ZFP2Q6ZN57 461 aa8.26□□□□□ -1.09
SHMT2-223ENST00000556689 ZC2HC1AQ96GY0 325 aa8.26□□□□□ -1.09
SHMT2-223ENST00000556689 C11orf21Q9P2W6 132 aa8.26□□□□□ -1.09
SHMT2-223ENST00000556689 LINC00694P0DN24 101 aa8.25□□□□□ -1.09
SHMT2-223ENST00000556689 RNASE3P12724 160 aaKnown RBP8.25□□□□□ -1.09
SHMT2-223ENST00000556689 RPS20P60866 119 aaKnown RBP8.25□□□□□ -1.09
SHMT2-223ENST00000556689 RPL37AP61513 92 aaKnown RBP8.25□□□□□ -1.09
SHMT2-223ENST00000556689 RPL23P62829 140 aaKnown RBP8.25□□□□□ -1.09
SHMT2-223ENST00000556689 OCC1Q8TAD7 63 aa8.25□□□□□ -1.09
SHMT2-223ENST00000556689 SFRP2Q96HF1 295 aa8.25□□□□□ -1.09
SHMT2-223ENST00000556689 A8MWV9 139 aa8.24□□□□□ -1.09
SHMT2-223ENST00000556689 SH2D1AO60880 128 aa8.24□□□□□ -1.09
SHMT2-223ENST00000556689 ATP6V1G1O75348 118 aa8.24□□□□□ -1.09
SHMT2-223ENST00000556689 ADCYAP1P18509 176 aa8.24□□□□□ -1.09
SHMT2-223ENST00000556689 COX8CQ7Z4L0 72 aa8.24□□□□□ -1.09
SHMT2-223ENST00000556689 ISOC2Q96AB3 205 aa8.24□□□□□ -1.09
SHMT2-223ENST00000556689 BORCS7Q96B45 105 aa8.24□□□□□ -1.09
SHMT2-223ENST00000556689 ANAPC16Q96DE5 110 aa8.24□□□□□ -1.09
SHMT2-223ENST00000556689 DNAJC30Q96LL9 226 aa8.24□□□□□ -1.09
SHMT2-223ENST00000556689 MLST8Q9BVC4 326 aa8.24□□□□□ -1.09
SHMT2-223ENST00000556689 SAMD10Q9BYL1 202 aa8.24□□□□□ -1.09
SHMT2-223ENST00000556689 RPP21Q9H633 154 aaKnown RBP8.24□□□□□ -1.09
SHMT2-223ENST00000556689 Q9UF83 564 aa8.24□□□□□ -1.09
SHMT2-223ENST00000556689 KLK12Q9UKR0 248 aa8.24□□□□□ -1.09
SHMT2-223ENST00000556689 GATCO43716 136 aaKnown RBP8.23□□□□□ -1.09
SHMT2-223ENST00000556689 RPL19P84098 196 aaKnown RBP8.23□□□□□ -1.09
SHMT2-223ENST00000556689 ELOBQ15370 118 aa8.23□□□□□ -1.09
SHMT2-223ENST00000556689 C14orf177Q52M58 125 aa8.23□□□□□ -1.09
SHMT2-223ENST00000556689 PIK3CD-AS1Q5SR53 167 aa8.23□□□□□ -1.09
SHMT2-223ENST00000556689 C10orf91Q5T1B1 145 aa8.23□□□□□ -1.09
SHMT2-223ENST00000556689 FAM231DQ6ZW35 169 aa8.23□□□□□ -1.09
SHMT2-223ENST00000556689 NIT1Q86X76 327 aa8.23□□□□□ -1.09
SHMT2-223ENST00000556689 OR10G8Q8NGN5 311 aa8.23□□□□□ -1.09
SHMT2-223ENST00000556689 UBE2WQ96B02 151 aa8.23□□□□□ -1.09
SHMT2-223ENST00000556689 PKHD1L1Q86WI1 4243 aa8.22□□□□□ -1.09
SHMT2-223ENST00000556689 A0A087WX48 190 aa8.22□□□□□ -1.09
SHMT2-223ENST00000556689 A8MWL6 223 aa8.22□□□□□ -1.09
SHMT2-223ENST00000556689 K7EN84 100 aa8.22□□□□□ -1.09
SHMT2-223ENST00000556689 S100PP25815 95 aa8.22□□□□□ -1.09
SHMT2-223ENST00000556689 S100A4P26447 101 aaKnown RBP8.22□□□□□ -1.09
SHMT2-223ENST00000556689 KCNIP4Q6PIL6 250 aa8.22□□□□□ -1.09
SHMT2-223ENST00000556689 C14orf178Q8N769 122 aaPredicted RBP8.22□□□□□ -1.09
SHMT2-223ENST00000556689 OR2D3Q8NGH3 330 aa8.22□□□□□ -1.09
SHMT2-223ENST00000556689 CTDSP1Q9GZU7 261 aa8.22□□□□□ -1.09
SHMT2-223ENST00000556689 OSTCQ9NRP0 149 aa8.22□□□□□ -1.09
SHMT2-223ENST00000556689 ASIPP42127 132 aa8.21□□□□□ -1.1
SHMT2-223ENST00000556689 Q0VG73 95 aa8.21□□□□□ -1.1
SHMT2-223ENST00000556689 LINC01559Q495D7 138 aa8.21□□□□□ -1.1
SHMT2-223ENST00000556689 CT83Q5H943 113 aa8.21□□□□□ -1.1
SHMT2-223ENST00000556689 CLRN3Q8NCR9 226 aa8.21□□□□□ -1.1
SHMT2-223ENST00000556689 RNASE7Q9H1E1 156 aaKnown RBP8.21□□□□□ -1.1
SHMT2-223ENST00000556689 RPS10P5Q9NQ39 176 aa8.21□□□□□ -1.1
SHMT2-223ENST00000556689 HNRNPA3P51991 378 aaKnown RBP8.2□□□□□ -1.1
SHMT2-223ENST00000556689 UFSP1Q6NVU6 142 aa8.2□□□□□ -1.1
SHMT2-223ENST00000556689 ATRAIDQ6UW56 229 aa8.2□□□□□ -1.1
SHMT2-223ENST00000556689 CHCHD7Q9BUK0 85 aa8.2□□□□□ -1.1
SHMT2-223ENST00000556689 JPT2Q9H910 190 aa8.2□□□□□ -1.1
SHMT2-223ENST00000556689 TMSB15BA0A087X1C1 80 aa8.19□□□□□ -1.1
SHMT2-223ENST00000556689 C19orf71A6NCJ1 209 aa8.19□□□□□ -1.1
SHMT2-223ENST00000556689 CXCL1P09341 107 aa8.19□□□□□ -1.1
SHMT2-223ENST00000556689 DMRTA1Q5VZB9 504 aa8.19□□□□□ -1.1
SHMT2-223ENST00000556689 NUDT10Q8NFP7 164 aa8.19□□□□□ -1.1
SHMT2-223ENST00000556689 NUDT11Q96G61 164 aa8.19□□□□□ -1.1
SHMT2-223ENST00000556689 BTF3L4Q96K17 158 aa8.19□□□□□ -1.1
SHMT2-223ENST00000556689 TPPP3Q9BW30 176 aa8.19□□□□□ -1.1
SHMT2-223ENST00000556689 IGKV3D-20A0A0C4DH25 116 aa8.18□□□□□ -1.1
SHMT2-223ENST00000556689 C7orf77A4D0Y5 90 aa8.18□□□□□ -1.1
SHMT2-223ENST00000556689 TMEM262E9PQX1 116 aa8.18□□□□□ -1.1
SHMT2-223ENST00000556689 RHODO00212 210 aa8.18□□□□□ -1.1
SHMT2-223ENST00000556689 MT1HL1P0DM35 61 aa8.18□□□□□ -1.1
SHMT2-223ENST00000556689 TSKUQ8WUA8 353 aa8.18□□□□□ -1.1
SHMT2-223ENST00000556689 C1orf43Q9BWL3 253 aa8.18□□□□□ -1.1
SHMT2-223ENST00000556689 GFRA4Q9GZZ7 299 aa8.18□□□□□ -1.1
SHMT2-223ENST00000556689 TMEM242Q9NWH2 141 aa8.18□□□□□ -1.1
SHMT2-223ENST00000556689 NAT8BQ9UHF3 227 aa8.18□□□□□ -1.1
SHMT2-223ENST00000556689 FAM231BA6NCW3 169 aa8.17□□□□□ -1.1
SHMT2-223ENST00000556689 F2Z2F3 143 aa8.17□□□□□ -1.1
SHMT2-223ENST00000556689 DGAT2L7PQ6IED9 249 aa8.17□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 201.8 ms