RNA–Protein interactions for RNA: ENST00000556541.1

FOXN3-212, Transcript of forkhead box N3, humanhuman

TSL 3

Gene FOXN3, Length 388 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-212ENST00000556541 RPL36ALQ969Q0 106 aaKnown RBP7.86□□□□□ -1.15
FOXN3-212ENST00000556541 ICOSQ9Y6W8 199 aa7.86□□□□□ -1.15
FOXN3-212ENST00000556541 TRBV7-3A0A075B6L6 115 aa7.85□□□□□ -1.15
FOXN3-212ENST00000556541 IGHV3-73A0A0B4J1V6 119 aa7.85□□□□□ -1.15
FOXN3-212ENST00000556541 PRSS47A8MTI9 375 aa7.85□□□□□ -1.15
FOXN3-212ENST00000556541 HTN3P15516 51 aa7.85□□□□□ -1.15
FOXN3-212ENST00000556541 ORMDL3Q8N138 153 aa7.85□□□□□ -1.15
FOXN3-212ENST00000556541 NEXN-AS1Q8NBZ9 246 aa7.85□□□□□ -1.15
FOXN3-212ENST00000556541 C20orf78Q9BR46 151 aa7.85□□□□□ -1.15
FOXN3-212ENST00000556541 DYNC2H1Q8NCM8 4307 aaKnown RBP7.84□□□□□ -1.15
FOXN3-212ENST00000556541 APCSP02743 223 aa7.84□□□□□ -1.15
FOXN3-212ENST00000556541 GYPEP15421 78 aa7.84□□□□□ -1.15
FOXN3-212ENST00000556541 CKS2P33552 79 aa7.84□□□□□ -1.15
FOXN3-212ENST00000556541 UBE2D3P61077 147 aa7.84□□□□□ -1.15
FOXN3-212ENST00000556541 UBE2D2P62837 147 aa7.84□□□□□ -1.15
FOXN3-212ENST00000556541 TMEM97Q5BJF2 176 aa7.84□□□□□ -1.15
FOXN3-212ENST00000556541 DAZ4Q86SG3 579 aaKnown RBP7.84□□□□□ -1.15
FOXN3-212ENST00000556541 NRACQ8N912 160 aa7.84□□□□□ -1.15
FOXN3-212ENST00000556541 DAZ3Q9NR90 486 aaKnown RBP7.84□□□□□ -1.15
FOXN3-212ENST00000556541 A0A096LPF7 62 aa7.83□□□□□ -1.16
FOXN3-212ENST00000556541 RAB5AP20339 215 aa7.83□□□□□ -1.16
FOXN3-212ENST00000556541 SRIP30626 198 aa7.83□□□□□ -1.16
FOXN3-212ENST00000556541 SREK1IP1Q8N9Q2 155 aaPredicted RBP7.83□□□□□ -1.16
FOXN3-212ENST00000556541 KRTAP3-3Q9BYR6 98 aa7.83□□□□□ -1.16
FOXN3-212ENST00000556541 KRTAP3-2Q9BYR7 98 aa7.83□□□□□ -1.16
FOXN3-212ENST00000556541 MRPL18Q9H0U6 180 aaKnown RBP7.83□□□□□ -1.16
FOXN3-212ENST00000556541 APLNQ9ULZ1 77 aa7.83□□□□□ -1.16
FOXN3-212ENST00000556541 TNFRSF18Q9Y5U5 241 aa7.83□□□□□ -1.16
FOXN3-212ENST00000556541 TRBV27A0A0K0K1C4 114 aa7.82□□□□□ -1.16
FOXN3-212ENST00000556541 IGLL5B9A064 214 aa7.82□□□□□ -1.16
FOXN3-212ENST00000556541 D6R8Y8 96 aa7.82□□□□□ -1.16
FOXN3-212ENST00000556541 TCAPO15273 167 aa7.82□□□□□ -1.16
FOXN3-212ENST00000556541 SCO1O75880 301 aa7.82□□□□□ -1.16
FOXN3-212ENST00000556541 POLR2KP53803 58 aaKnown RBP7.82□□□□□ -1.16
FOXN3-212ENST00000556541 OR10J3Q5JRS4 329 aa7.82□□□□□ -1.16
FOXN3-212ENST00000556541 NEGR1Q7Z3B1 354 aa7.82□□□□□ -1.16
FOXN3-212ENST00000556541 TRAPPC1Q9Y5R8 145 aa7.82□□□□□ -1.16
FOXN3-212ENST00000556541 EPPK1P58107 5090 aaKnown RBP7.82□□□□□ -1.16
FOXN3-212ENST00000556541 TRAV26-2A0A0B4J265 109 aa7.81□□□□□ -1.16
FOXN3-212ENST00000556541 A0A0J9YY99 117 aa7.81□□□□□ -1.16
FOXN3-212ENST00000556541 K7EMI3 77 aa7.81□□□□□ -1.16
FOXN3-212ENST00000556541 TNFRSF6BO95407 300 aa7.81□□□□□ -1.16
FOXN3-212ENST00000556541 NCR2O95944 276 aa7.81□□□□□ -1.16
FOXN3-212ENST00000556541 SUMO2P61956 95 aaKnown RBP7.81□□□□□ -1.16
FOXN3-212ENST00000556541 CASC10Q5T4H9 136 aa7.81□□□□□ -1.16
FOXN3-212ENST00000556541 ATP6V0E2Q8NHE4 81 aa7.81□□□□□ -1.16
FOXN3-212ENST00000556541 ZNRF2Q8NHG8 242 aa7.81□□□□□ -1.16
FOXN3-212ENST00000556541 PRELID3AQ96N28 172 aa7.81□□□□□ -1.16
FOXN3-212ENST00000556541 TMEM70Q9BUB7 260 aa7.81□□□□□ -1.16
FOXN3-212ENST00000556541 KRTAP17-1Q9BYP8 105 aa7.81□□□□□ -1.16
FOXN3-212ENST00000556541 GTSF1LQ9H1H1 148 aa7.81□□□□□ -1.16
FOXN3-212ENST00000556541 ST20Q9HBF5 79 aa7.81□□□□□ -1.16
FOXN3-212ENST00000556541 CSMD3Q7Z407 3707 aa7.81□□□□□ -1.16
FOXN3-212ENST00000556541 LOC100131303A0A0U1RQF7 123 aa7.8□□□□□ -1.16
FOXN3-212ENST00000556541 SDHAF1A6NFY7 115 aa7.8□□□□□ -1.16
FOXN3-212ENST00000556541 P0DMU3 169 aa7.8□□□□□ -1.16
FOXN3-212ENST00000556541 FAM231AP0DMU4 169 aa7.8□□□□□ -1.16
FOXN3-212ENST00000556541 FAM231CP0DMU5 169 aa7.8□□□□□ -1.16
FOXN3-212ENST00000556541 RPS10P46783 165 aaKnown RBP7.8□□□□□ -1.16
FOXN3-212ENST00000556541 FABP9Q0Z7S8 132 aa7.8□□□□□ -1.16
FOXN3-212ENST00000556541 RPL39LQ96EH5 51 aaKnown RBP7.8□□□□□ -1.16
FOXN3-212ENST00000556541 ALKBH7Q9BT30 221 aaPredicted RBP7.8□□□□□ -1.16
FOXN3-212ENST00000556541 Q9UF83 564 aa7.8□□□□□ -1.16
FOXN3-212ENST00000556541 GAGE12JA6NER3 117 aa7.79□□□□□ -1.16
FOXN3-212ENST00000556541 VCYO14598 125 aa7.79□□□□□ -1.16
FOXN3-212ENST00000556541 NPYP01303 97 aa7.79□□□□□ -1.16
FOXN3-212ENST00000556541 GAGE1Q13065 139 aa7.79□□□□□ -1.16
FOXN3-212ENST00000556541 GAGE4Q13068 117 aa7.79□□□□□ -1.16
FOXN3-212ENST00000556541 GAGE5Q13069 117 aa7.79□□□□□ -1.16
FOXN3-212ENST00000556541 GAGE13Q4V321 117 aa7.79□□□□□ -1.16
FOXN3-212ENST00000556541 UPK3BQ9BT76 320 aa7.79□□□□□ -1.16
FOXN3-212ENST00000556541 SMIM2Q9BVW6 85 aa7.79□□□□□ -1.16
FOXN3-212ENST00000556541 IGLV2-18A0A075B6J9 118 aa7.78□□□□□ -1.16
FOXN3-212ENST00000556541 SMKR1H3BMG3 65 aa7.78□□□□□ -1.16
FOXN3-212ENST00000556541 I3L3M4 83 aa7.78□□□□□ -1.16
FOXN3-212ENST00000556541 GAS8-AS1O95177 125 aa7.78□□□□□ -1.16
FOXN3-212ENST00000556541 NUDT3O95989 172 aa7.78□□□□□ -1.16
FOXN3-212ENST00000556541 LELP1Q5T871 98 aa7.78□□□□□ -1.16
FOXN3-212ENST00000556541 LYPD5Q6UWN5 251 aa7.78□□□□□ -1.16
FOXN3-212ENST00000556541 MAP1LC3AQ9H492 121 aa7.78□□□□□ -1.16
FOXN3-212ENST00000556541 NXT2Q9NPJ8 142 aaKnown RBP7.78□□□□□ -1.16
FOXN3-212ENST00000556541 BIRC6Q9NR09 4857 aa7.78□□□□□ -1.16
FOXN3-212ENST00000556541 LINC01546A6NGU7 62 aa7.77□□□□□ -1.17
FOXN3-212ENST00000556541 PMCHP20382 165 aa7.77□□□□□ -1.17
FOXN3-212ENST00000556541 CCL18P55774 89 aa7.77□□□□□ -1.17
FOXN3-212ENST00000556541 PKIAP61925 76 aa7.77□□□□□ -1.17
FOXN3-212ENST00000556541 IQCJQ1A5X6 159 aa7.77□□□□□ -1.17
FOXN3-212ENST00000556541 ZFAND6Q6FIF0 208 aa7.77□□□□□ -1.17
FOXN3-212ENST00000556541 MRPS16Q9Y3D3 137 aaKnown RBP7.77□□□□□ -1.17
FOXN3-212ENST00000556541 TRBV6-8A0A0A6YYG3 113 aa7.76□□□□□ -1.17
FOXN3-212ENST00000556541 H7C423 109 aa7.76□□□□□ -1.17
FOXN3-212ENST00000556541 TRGC2P03986 189 aa7.76□□□□□ -1.17
FOXN3-212ENST00000556541 COTL1Q14019 142 aa7.76□□□□□ -1.17
FOXN3-212ENST00000556541 ESRGQ1W209 222 aa7.76□□□□□ -1.17
FOXN3-212ENST00000556541 KIAA1644Q3SXP7 199 aa7.76□□□□□ -1.17
FOXN3-212ENST00000556541 LGALS9CQ6DKI2 356 aa7.76□□□□□ -1.17
FOXN3-212ENST00000556541 Q8N8P6 123 aa7.76□□□□□ -1.17
FOXN3-212ENST00000556541 KIR2DL4Q99706 377 aa7.76□□□□□ -1.17
FOXN3-212ENST00000556541 STARD9Q9P2P6 4700 aa7.76□□□□□ -1.17
FOXN3-212ENST00000556541 LINC01549A6NIU2 74 aa7.75□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 101.3 ms