RNA–Protein interactions for RNA: ENST00000556274.5

ATXN3-237, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 913 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-237ENST00000556274 TRAV1-1A0A0B4J248 108 aa3.23□□□□□ -1.89
ATXN3-237ENST00000556274 IGKV3D-20A0A0C4DH25 116 aa3.23□□□□□ -1.89
ATXN3-237ENST00000556274 M0R381 172 aa3.23□□□□□ -1.89
ATXN3-237ENST00000556274 PDE6DO43924 150 aa3.23□□□□□ -1.89
ATXN3-237ENST00000556274 LTAP01374 205 aa3.23□□□□□ -1.89
ATXN3-237ENST00000556274 SMIM6P0DI80 62 aa3.23□□□□□ -1.89
ATXN3-237ENST00000556274 CRIP1P50238 77 aa3.23□□□□□ -1.89
ATXN3-237ENST00000556274 RPL19P84098 196 aaKnown RBP3.23□□□□□ -1.89
ATXN3-237ENST00000556274 MEF2BQ02080 365 aaPredicted RBP3.23□□□□□ -1.89
ATXN3-237ENST00000556274 SLAQ13239 276 aa3.23□□□□□ -1.89
ATXN3-237ENST00000556274 RHEBQ15382 184 aa3.23□□□□□ -1.89
ATXN3-237ENST00000556274 CENPWQ5EE01 88 aa3.23□□□□□ -1.89
ATXN3-237ENST00000556274 FAM74A4Q5TZK3 123 aa3.23□□□□□ -1.89
ATXN3-237ENST00000556274 ATRAIDQ6UW56 229 aa3.23□□□□□ -1.89
ATXN3-237ENST00000556274 DERL1Q9BUN8 251 aa3.23□□□□□ -1.89
ATXN3-237ENST00000556274 PRO0255Q9UI72 69 aa3.23□□□□□ -1.89
ATXN3-237ENST00000556274 ICOSQ9Y6W8 199 aa3.23□□□□□ -1.89
ATXN3-237ENST00000556274 TRAV4A0A0B4J268 109 aa3.22□□□□□ -1.89
ATXN3-237ENST00000556274 LOC100131303A0A0U1RQF7 123 aa3.22□□□□□ -1.89
ATXN3-237ENST00000556274 C1orf196B1AJZ1 125 aa3.22□□□□□ -1.89
ATXN3-237ENST00000556274 SMIM1B2RUZ4 78 aa3.22□□□□□ -1.89
ATXN3-237ENST00000556274 CIDEAO60543 219 aa3.22□□□□□ -1.89
ATXN3-237ENST00000556274 P01737 135 aa3.22□□□□□ -1.89
ATXN3-237ENST00000556274 SMIM17P0DL12 118 aa3.22□□□□□ -1.89
ATXN3-237ENST00000556274 GZMBP10144 247 aa3.22□□□□□ -1.89
ATXN3-237ENST00000556274 BCL2P10415 239 aa3.22□□□□□ -1.89
ATXN3-237ENST00000556274 SRIP30626 198 aa3.22□□□□□ -1.89
ATXN3-237ENST00000556274 CRYBA4P53673 196 aa3.22□□□□□ -1.89
ATXN3-237ENST00000556274 MRPL23Q16540 153 aaKnown RBP3.22□□□□□ -1.89
ATXN3-237ENST00000556274 ESRGQ1W209 222 aa3.22□□□□□ -1.89
ATXN3-237ENST00000556274 TDRG1Q3Y452 100 aa3.22□□□□□ -1.89
ATXN3-237ENST00000556274 FAM74A3Q4VXF1 159 aa3.22□□□□□ -1.89
ATXN3-237ENST00000556274 ZNF506Q5JVG8 444 aa3.22□□□□□ -1.89
ATXN3-237ENST00000556274 DNLZQ5SXM8 178 aa3.22□□□□□ -1.89
ATXN3-237ENST00000556274 SPANXN1Q5VSR9 72 aa3.22□□□□□ -1.89
ATXN3-237ENST00000556274 OR2D3Q8NGH3 330 aa3.22□□□□□ -1.89
ATXN3-237ENST00000556274 OCC1Q8TAD7 63 aa3.22□□□□□ -1.89
ATXN3-237ENST00000556274 RASL10AQ92737 203 aa3.22□□□□□ -1.89
ATXN3-237ENST00000556274 VSIG2Q96IQ7 327 aa3.22□□□□□ -1.89
ATXN3-237ENST00000556274 TXNDC17Q9BRA2 123 aa3.22□□□□□ -1.89
ATXN3-237ENST00000556274 PRADC1Q9BSG0 188 aa3.22□□□□□ -1.89
ATXN3-237ENST00000556274 JPT2Q9H910 190 aa3.22□□□□□ -1.89
ATXN3-237ENST00000556274 LINC00588Q9Y4M8 146 aa3.22□□□□□ -1.89
ATXN3-237ENST00000556274 CSMD3Q7Z407 3707 aa3.21□□□□□ -1.9
ATXN3-237ENST00000556274 A0A087WWC5 75 aa3.21□□□□□ -1.9
ATXN3-237ENST00000556274 TRBV6-1A0A0K0K1D8 114 aa3.21□□□□□ -1.9
ATXN3-237ENST00000556274 COLCA2A8K830 154 aa3.21□□□□□ -1.9
ATXN3-237ENST00000556274 ZNF727A8MUV8 499 aa3.21□□□□□ -1.9
ATXN3-237ENST00000556274 A8MWV9 139 aa3.21□□□□□ -1.9
ATXN3-237ENST00000556274 RS1O15537 224 aa3.21□□□□□ -1.9
ATXN3-237ENST00000556274 S100A6P06703 90 aa3.21□□□□□ -1.9
ATXN3-237ENST00000556274 MGPP08493 103 aa3.21□□□□□ -1.9
ATXN3-237ENST00000556274 CFC1BP0CG36 223 aa3.21□□□□□ -1.9
ATXN3-237ENST00000556274 CFC1P0CG37 223 aa3.21□□□□□ -1.9
ATXN3-237ENST00000556274 VPREB1P12018 145 aa3.21□□□□□ -1.9
ATXN3-237ENST00000556274 RNASE3P12724 160 aaKnown RBP3.21□□□□□ -1.9
ATXN3-237ENST00000556274 ADCYAP1P18509 176 aa3.21□□□□□ -1.9
ATXN3-237ENST00000556274 TAGLN2P37802 199 aaKnown RBP3.21□□□□□ -1.9
ATXN3-237ENST00000556274 CFAP126Q5VTH2 177 aa3.21□□□□□ -1.9
ATXN3-237ENST00000556274 LYPD5Q6UWN5 251 aa3.21□□□□□ -1.9
ATXN3-237ENST00000556274 NEGR1Q7Z3B1 354 aa3.21□□□□□ -1.9
ATXN3-237ENST00000556274 LINC00612Q8N6U2 182 aa3.21□□□□□ -1.9
ATXN3-237ENST00000556274 C9orf85Q96MD7 179 aa3.21□□□□□ -1.9
ATXN3-237ENST00000556274 Q9H8V8 135 aa3.21□□□□□ -1.9
ATXN3-237ENST00000556274 SCRT2Q9NQ03 307 aa3.21□□□□□ -1.9
ATXN3-237ENST00000556274 IL36BQ9NZH7 164 aa3.21□□□□□ -1.9
ATXN3-237ENST00000556274 RYR3Q15413 4870 aa3.2□□□□□ -1.9
ATXN3-237ENST00000556274 XKRY2A2RUG3 117 aa3.2□□□□□ -1.9
ATXN3-237ENST00000556274 C5orf52A6NGY3 159 aa3.2□□□□□ -1.9
ATXN3-237ENST00000556274 K7EQD1 137 aa3.2□□□□□ -1.9
ATXN3-237ENST00000556274 GATCO43716 136 aaKnown RBP3.2□□□□□ -1.9
ATXN3-237ENST00000556274 TSHBP01222 138 aa3.2□□□□□ -1.9
ATXN3-237ENST00000556274 S100PP25815 95 aa3.2□□□□□ -1.9
ATXN3-237ENST00000556274 RPS20P60866 119 aaKnown RBP3.2□□□□□ -1.9
ATXN3-237ENST00000556274 ZNF56Q15929 161 aa3.2□□□□□ -1.9
ATXN3-237ENST00000556274 OR10J3Q5JRS4 329 aa3.2□□□□□ -1.9
ATXN3-237ENST00000556274 SOHLH1Q5JUK2 328 aa3.2□□□□□ -1.9
ATXN3-237ENST00000556274 C1orf134Q5TEV5 83 aa3.2□□□□□ -1.9
ATXN3-237ENST00000556274 CFAP161Q6P656 301 aa3.2□□□□□ -1.9
ATXN3-237ENST00000556274 ZFP82Q8N141 532 aa3.2□□□□□ -1.9
ATXN3-237ENST00000556274 C14orf178Q8N769 122 aaPredicted RBP3.2□□□□□ -1.9
ATXN3-237ENST00000556274 SLC25A29Q8N8R3 303 aa3.2□□□□□ -1.9
ATXN3-237ENST00000556274 OR10AG1Q8NH19 301 aa3.2□□□□□ -1.9
ATXN3-237ENST00000556274 ATP6V0E2Q8NHE4 81 aa3.2□□□□□ -1.9
ATXN3-237ENST00000556274 C12orf57Q99622 126 aa3.2□□□□□ -1.9
ATXN3-237ENST00000556274 SMIM7Q9BQ49 75 aa3.2□□□□□ -1.9
ATXN3-237ENST00000556274 SAMD10Q9BYL1 202 aa3.2□□□□□ -1.9
ATXN3-237ENST00000556274 RNASE7Q9H1E1 156 aaKnown RBP3.2□□□□□ -1.9
ATXN3-237ENST00000556274 PARLQ9H300 379 aa3.2□□□□□ -1.9
ATXN3-237ENST00000556274 TMEM242Q9NWH2 141 aa3.2□□□□□ -1.9
ATXN3-237ENST00000556274 TRAV9-2A0A087WT02 112 aa3.19□□□□□ -1.9
ATXN3-237ENST00000556274 TRAV8-6A0A0B4J262 113 aa3.19□□□□□ -1.9
ATXN3-237ENST00000556274 NBDYA0A0U1RRE5 68 aa3.19□□□□□ -1.9
ATXN3-237ENST00000556274 C7orf77A4D0Y5 90 aa3.19□□□□□ -1.9
ATXN3-237ENST00000556274 H3BNG1 76 aa3.19□□□□□ -1.9
ATXN3-237ENST00000556274 SIVA1O15304 175 aa3.19□□□□□ -1.9
ATXN3-237ENST00000556274 NXPH4O95158 308 aa3.19□□□□□ -1.9
ATXN3-237ENST00000556274 IGLV2-8P01709 118 aa3.19□□□□□ -1.9
ATXN3-237ENST00000556274 IGHV3-30P01768 117 aa3.19□□□□□ -1.9
ATXN3-237ENST00000556274 IGHV3-33P01772 117 aa3.19□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms