RNA–Protein interactions for RNA: ENST00000556082.5

ATXN3-235, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 660 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-235ENST00000556082 TRBV27A0A0K0K1C4 114 aa6.03□□□□□ -1.44
ATXN3-235ENST00000556082 A8MWV9 139 aa6.03□□□□□ -1.44
ATXN3-235ENST00000556082 M0QY20 66 aa6.03□□□□□ -1.44
ATXN3-235ENST00000556082 IGLL1P15814 213 aa6.03□□□□□ -1.44
ATXN3-235ENST00000556082 SUMO4Q6EEV6 95 aa6.03□□□□□ -1.44
ATXN3-235ENST00000556082 C11orf72Q8NBR9 251 aa6.03□□□□□ -1.44
ATXN3-235ENST00000556082 TMEM158Q8WZ71 300 aa6.03□□□□□ -1.44
ATXN3-235ENST00000556082 RPL39LQ96EH5 51 aaKnown RBP6.03□□□□□ -1.44
ATXN3-235ENST00000556082 JPT2Q9H910 190 aa6.03□□□□□ -1.44
ATXN3-235ENST00000556082 MUC4Q99102 2169 aa6.02□□□□□ -1.45
ATXN3-235ENST00000556082 HSBP1L1C9JCN9 74 aa6.02□□□□□ -1.45
ATXN3-235ENST00000556082 H7C1H1 209 aa6.02□□□□□ -1.45
ATXN3-235ENST00000556082 TCAPO15273 167 aa6.02□□□□□ -1.45
ATXN3-235ENST00000556082 NUDT3O95989 172 aa6.02□□□□□ -1.45
ATXN3-235ENST00000556082 UFSP1Q6NVU6 142 aa6.02□□□□□ -1.45
ATXN3-235ENST00000556082 MORN3Q6PF18 240 aaPredicted RBP6.02□□□□□ -1.45
ATXN3-235ENST00000556082 ATOH7Q8N100 152 aa6.02□□□□□ -1.45
ATXN3-235ENST00000556082 C1orf158Q8N1D5 194 aa6.02□□□□□ -1.45
ATXN3-235ENST00000556082 TOMM6Q96B49 74 aa6.02□□□□□ -1.45
ATXN3-235ENST00000556082 CSTL1Q9H114 145 aa6.02□□□□□ -1.45
ATXN3-235ENST00000556082 ZMAT4Q9H898 229 aa6.02□□□□□ -1.45
ATXN3-235ENST00000556082 GOLT1BQ9Y3E0 138 aa6.02□□□□□ -1.45
ATXN3-235ENST00000556082 SORL1Q92673 2214 aa6.02□□□□□ -1.45
ATXN3-235ENST00000556082 NF1P21359 2839 aa6.02□□□□□ -1.45
ATXN3-235ENST00000556082 A0A087WWL8 130 aa6.01□□□□□ -1.45
ATXN3-235ENST00000556082 F5H697 171 aa6.01□□□□□ -1.45
ATXN3-235ENST00000556082 RHODO00212 210 aa6.01□□□□□ -1.45
ATXN3-235ENST00000556082 GIG44P09565 113 aaPredicted RBP6.01□□□□□ -1.45
ATXN3-235ENST00000556082 MAJINQ3KP22 176 aa6.01□□□□□ -1.45
ATXN3-235ENST00000556082 IL17DQ8TAD2 202 aa6.01□□□□□ -1.45
ATXN3-235ENST00000556082 CITED1Q99966 193 aa6.01□□□□□ -1.45
ATXN3-235ENST00000556082 C1QTNF4Q9BXJ3 329 aa6.01□□□□□ -1.45
ATXN3-235ENST00000556082 MRPS16Q9Y3D3 137 aaKnown RBP6.01□□□□□ -1.45
ATXN3-235ENST00000556082 TRAV12-1A0A0B4J245 112 aa6□□□□□ -1.45
ATXN3-235ENST00000556082 M0R143 59 aa6□□□□□ -1.45
ATXN3-235ENST00000556082 RIPPLY3P57055 190 aa6□□□□□ -1.45
ATXN3-235ENST00000556082 ODF1Q14990 250 aa6□□□□□ -1.45
ATXN3-235ENST00000556082 RHOHQ15669 191 aa6□□□□□ -1.45
ATXN3-235ENST00000556082 ZFP2Q6ZN57 461 aa6□□□□□ -1.45
ATXN3-235ENST00000556082 KIR2DL4Q99706 377 aa6□□□□□ -1.45
ATXN3-235ENST00000556082 PMCHL2Q9BQD1 86 aa6□□□□□ -1.45
ATXN3-235ENST00000556082 C2orf88Q9BSF0 95 aa6□□□□□ -1.45
ATXN3-235ENST00000556082 XCL2Q9UBD3 114 aa6□□□□□ -1.45
ATXN3-235ENST00000556082 AGRNO00468 2067 aa6□□□□□ -1.45
ATXN3-235ENST00000556082 A0A087WX48 190 aa5.99□□□□□ -1.45
ATXN3-235ENST00000556082 hDV102S1A0JD36 115 aa5.99□□□□□ -1.45
ATXN3-235ENST00000556082 SDHAF1A6NFY7 115 aa5.99□□□□□ -1.45
ATXN3-235ENST00000556082 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP5.99□□□□□ -1.45
ATXN3-235ENST00000556082 RS1O15537 224 aa5.99□□□□□ -1.45
ATXN3-235ENST00000556082 PRSS1P07477 247 aa5.99□□□□□ -1.45
ATXN3-235ENST00000556082 DAZ2Q13117 558 aaKnown RBP5.99□□□□□ -1.45
ATXN3-235ENST00000556082 ZNF56Q15929 161 aa5.99□□□□□ -1.45
ATXN3-235ENST00000556082 RNF151Q2KHN1 245 aa5.99□□□□□ -1.45
ATXN3-235ENST00000556082 C9orf66Q5T8R8 295 aa5.99□□□□□ -1.45
ATXN3-235ENST00000556082 CFAP126Q5VTH2 177 aa5.99□□□□□ -1.45
ATXN3-235ENST00000556082 C2orf66Q6UXQ4 117 aa5.99□□□□□ -1.45
ATXN3-235ENST00000556082 Q6ZSN1 163 aa5.99□□□□□ -1.45
ATXN3-235ENST00000556082 ERASQ7Z444 233 aa5.99□□□□□ -1.45
ATXN3-235ENST00000556082 CSNK1G2-AS1Q8NCQ2 148 aa5.99□□□□□ -1.45
ATXN3-235ENST00000556082 WFDC9Q8NEX5 89 aa5.99□□□□□ -1.45
ATXN3-235ENST00000556082 RNASE8Q8TDE3 154 aaKnown RBP5.99□□□□□ -1.45
ATXN3-235ENST00000556082 TMEM263Q8WUH6 116 aaKnown RBP5.99□□□□□ -1.45
ATXN3-235ENST00000556082 DNAJC30Q96LL9 226 aa5.99□□□□□ -1.45
ATXN3-235ENST00000556082 SCGB3A1Q96QR1 104 aa5.99□□□□□ -1.45
ATXN3-235ENST00000556082 MCRIP2Q9BUT9 160 aaKnown RBP5.99□□□□□ -1.45
ATXN3-235ENST00000556082 FN1P02751 2386 aaKnown RBP5.99□□□□□ -1.45
ATXN3-235ENST00000556082 H0Y8G0 127 aa5.98□□□□□ -1.45
ATXN3-235ENST00000556082 I3L3M4 83 aa5.98□□□□□ -1.45
ATXN3-235ENST00000556082 DLEU1O43261 78 aa5.98□□□□□ -1.45
ATXN3-235ENST00000556082 CIDEAO60543 219 aa5.98□□□□□ -1.45
ATXN3-235ENST00000556082 IGHV3-53P01767 116 aa5.98□□□□□ -1.45
ATXN3-235ENST00000556082 COX8AP10176 69 aa5.98□□□□□ -1.45
ATXN3-235ENST00000556082 HTN1P15515 57 aa5.98□□□□□ -1.45
ATXN3-235ENST00000556082 FHL2Q14192 279 aa5.98□□□□□ -1.45
ATXN3-235ENST00000556082 FAM74A4Q5TZK3 123 aa5.98□□□□□ -1.45
ATXN3-235ENST00000556082 Q6ZN92 141 aa5.98□□□□□ -1.45
ATXN3-235ENST00000556082 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP5.98□□□□□ -1.45
ATXN3-235ENST00000556082 TMEM141Q96I45 108 aa5.98□□□□□ -1.45
ATXN3-235ENST00000556082 C18orf15Q96N68 181 aa5.98□□□□□ -1.45
ATXN3-235ENST00000556082 TMEM208Q9BTX3 173 aa5.98□□□□□ -1.45
ATXN3-235ENST00000556082 HHLA3Q9XRX5 114 aa5.98□□□□□ -1.45
ATXN3-235ENST00000556082 CYSLTR1Q9Y271 337 aa5.98□□□□□ -1.45
ATXN3-235ENST00000556082 HIVEP1P15822 2718 aa5.98□□□□□ -1.45
ATXN3-235ENST00000556082 NSD1Q96L73 2696 aaPredicted RBP5.98□□□□□ -1.45
ATXN3-235ENST00000556082 IGIPA6NJ69 53 aa5.97□□□□□ -1.45
ATXN3-235ENST00000556082 DPM2O94777 84 aa5.97□□□□□ -1.45
ATXN3-235ENST00000556082 PRM2P04554 102 aa5.97□□□□□ -1.45
ATXN3-235ENST00000556082 AZU1P20160 251 aa5.97□□□□□ -1.45
ATXN3-235ENST00000556082 PLNP26678 52 aa5.97□□□□□ -1.45
ATXN3-235ENST00000556082 HNRNPA3P51991 378 aaKnown RBP5.97□□□□□ -1.45
ATXN3-235ENST00000556082 SLC25A34Q6PIV7 304 aa5.97□□□□□ -1.45
ATXN3-235ENST00000556082 NEXN-AS1Q8NBZ9 246 aa5.97□□□□□ -1.45
ATXN3-235ENST00000556082 TIMM17AQ99595 171 aa5.97□□□□□ -1.45
ATXN3-235ENST00000556082 OVOL2Q9BRP0 275 aa5.97□□□□□ -1.45
ATXN3-235ENST00000556082 SNHG12Q9BXW3 62 aa5.97□□□□□ -1.45
ATXN3-235ENST00000556082 DKK2Q9UBU2 259 aa5.97□□□□□ -1.45
ATXN3-235ENST00000556082 SETXQ7Z333 2677 aaKnown RBP5.97□□□□□ -1.45
ATXN3-235ENST00000556082 C2CD3Q4AC94 2353 aa5.96□□□□□ -1.45
ATXN3-235ENST00000556082 SETD2Q9BYW2 2564 aaPredicted RBP5.96□□□□□ -1.46
ATXN3-235ENST00000556082 F8VRH5 84 aa5.96□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms