RNA–Protein interactions for RNA: ENST00000556066.1

PSEN1-216, Transcript of presenilin 1, humanhuman

TSL 3

Gene PSEN1, Length 612 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-216ENST00000556066 K7EN84 100 aa4.6□□□□□ -1.67
PSEN1-216ENST00000556066 VCYO14598 125 aa4.6□□□□□ -1.67
PSEN1-216ENST00000556066 SIVA1O15304 175 aa4.6□□□□□ -1.67
PSEN1-216ENST00000556066 NXPH4O95158 308 aa4.6□□□□□ -1.67
PSEN1-216ENST00000556066 TRGC2P03986 189 aa4.6□□□□□ -1.67
PSEN1-216ENST00000556066 AKR1D1P51857 326 aa4.6□□□□□ -1.67
PSEN1-216ENST00000556066 NDUFA6P56556 154 aa4.6□□□□□ -1.67
PSEN1-216ENST00000556066 LINC01620Q4KN68 170 aa4.6□□□□□ -1.67
PSEN1-216ENST00000556066 LINC00518Q8N0U6 118 aa4.6□□□□□ -1.67
PSEN1-216ENST00000556066 MAPKAPK5-AS1Q8N8E1 139 aa4.6□□□□□ -1.67
PSEN1-216ENST00000556066 FRZBQ92765 325 aa4.6□□□□□ -1.67
PSEN1-216ENST00000556066 C18orf15Q96N68 181 aa4.6□□□□□ -1.67
PSEN1-216ENST00000556066 C8orf49Q96NF6 230 aa4.6□□□□□ -1.67
PSEN1-216ENST00000556066 PRO0255Q9UI72 69 aa4.6□□□□□ -1.67
PSEN1-216ENST00000556066 HHLA3Q9XRX5 114 aa4.6□□□□□ -1.67
PSEN1-216ENST00000556066 ARL2-SNX15V9GYD0 113 aa4.6□□□□□ -1.67
PSEN1-216ENST00000556066 RBAKDNA6NC62 111 aa4.59□□□□□ -1.67
PSEN1-216ENST00000556066 C9JCJ5 164 aa4.59□□□□□ -1.67
PSEN1-216ENST00000556066 PHOX2AO14813 284 aa4.59□□□□□ -1.67
PSEN1-216ENST00000556066 TRIAP1O43715 76 aa4.59□□□□□ -1.67
PSEN1-216ENST00000556066 HIST1H2BKO60814 126 aa4.59□□□□□ -1.67
PSEN1-216ENST00000556066 CDK2AP2O75956 126 aa4.59□□□□□ -1.67
PSEN1-216ENST00000556066 IGLV2-8P01709 118 aa4.59□□□□□ -1.67
PSEN1-216ENST00000556066 HIST1H2BJP06899 126 aa4.59□□□□□ -1.67
PSEN1-216ENST00000556066 TRGC1P0CF51 173 aa4.59□□□□□ -1.67
PSEN1-216ENST00000556066 HIST1H2BOP23527 126 aa4.59□□□□□ -1.67
PSEN1-216ENST00000556066 S100PP25815 95 aa4.59□□□□□ -1.67
PSEN1-216ENST00000556066 HIST1H2BBP33778 126 aa4.59□□□□□ -1.67
PSEN1-216ENST00000556066 CRYBA4P53673 196 aa4.59□□□□□ -1.67
PSEN1-216ENST00000556066 HIST1H2BDP58876 126 aa4.59□□□□□ -1.67
PSEN1-216ENST00000556066 LINC00315P59091 139 aa4.59□□□□□ -1.67
PSEN1-216ENST00000556066 HIST1H2BCP62807 126 aa4.59□□□□□ -1.67
PSEN1-216ENST00000556066 GNG5P63218 68 aa4.59□□□□□ -1.67
PSEN1-216ENST00000556066 FABP9Q0Z7S8 132 aa4.59□□□□□ -1.67
PSEN1-216ENST00000556066 FHL2Q14192 279 aa4.59□□□□□ -1.67
PSEN1-216ENST00000556066 MRPL23Q16540 153 aaKnown RBP4.59□□□□□ -1.67
PSEN1-216ENST00000556066 HIST2H2BEQ16778 126 aa4.59□□□□□ -1.67
PSEN1-216ENST00000556066 TMEM183BQ1AE95 376 aa4.59□□□□□ -1.67
PSEN1-216ENST00000556066 CENPWQ5EE01 88 aa4.59□□□□□ -1.67
PSEN1-216ENST00000556066 HIST2H2BFQ5QNW6 126 aaPredicted RBP4.59□□□□□ -1.67
PSEN1-216ENST00000556066 TMEM183AQ8IXX5 376 aa4.59□□□□□ -1.67
PSEN1-216ENST00000556066 LYPD1Q8N2G4 141 aa4.59□□□□□ -1.67
PSEN1-216ENST00000556066 OR10G8Q8NGN5 311 aa4.59□□□□□ -1.67
PSEN1-216ENST00000556066 CMTM2Q8TAZ6 248 aa4.59□□□□□ -1.67
PSEN1-216ENST00000556066 HIST1H2BHQ93079 126 aa4.59□□□□□ -1.67
PSEN1-216ENST00000556066 SFRP2Q96HF1 295 aa4.59□□□□□ -1.67
PSEN1-216ENST00000556066 LINC00479Q96M42 142 aa4.59□□□□□ -1.67
PSEN1-216ENST00000556066 HIST1H2BNQ99877 126 aa4.59□□□□□ -1.67
PSEN1-216ENST00000556066 HIST1H2BMQ99879 126 aa4.59□□□□□ -1.67
PSEN1-216ENST00000556066 MDFICQ9P1T7 246 aa4.59□□□□□ -1.67
PSEN1-216ENST00000556066 TRBV7-9A0A0J9YWB2 115 aa4.58□□□□□ -1.68
PSEN1-216ENST00000556066 PGPA6NDG6 321 aa4.58□□□□□ -1.68
PSEN1-216ENST00000556066 DIRC3C9JPN6 131 aa4.58□□□□□ -1.68
PSEN1-216ENST00000556066 PPP1R2P9O14990 202 aa4.58□□□□□ -1.68
PSEN1-216ENST00000556066 GCGP01275 180 aa4.58□□□□□ -1.68
PSEN1-216ENST00000556066 GNG4P50150 75 aa4.58□□□□□ -1.68
PSEN1-216ENST00000556066 SUMO2P61956 95 aaKnown RBP4.58□□□□□ -1.68
PSEN1-216ENST00000556066 GAGE2BQ13066 116 aa4.58□□□□□ -1.68
PSEN1-216ENST00000556066 GAGE2EQ4V326 116 aa4.58□□□□□ -1.68
PSEN1-216ENST00000556066 GAGE2AQ6NT46 116 aa4.58□□□□□ -1.68
PSEN1-216ENST00000556066 LYPD5Q6UWN5 251 aa4.58□□□□□ -1.68
PSEN1-216ENST00000556066 GOLT1AQ6ZVE7 132 aa4.58□□□□□ -1.68
PSEN1-216ENST00000556066 NEGR1Q7Z3B1 354 aa4.58□□□□□ -1.68
PSEN1-216ENST00000556066 OTORQ9NRC9 128 aa4.58□□□□□ -1.68
PSEN1-216ENST00000556066 GAGE2DQ9UEU5 116 aa4.58□□□□□ -1.68
PSEN1-216ENST00000556066 LY96Q9Y6Y9 160 aa4.58□□□□□ -1.68
PSEN1-216ENST00000556066 TRGV11A0A075B6L2 103 aa4.57□□□□□ -1.68
PSEN1-216ENST00000556066 TRAV8-1A0A0A6YYK1 113 aa4.57□□□□□ -1.68
PSEN1-216ENST00000556066 IFITM10A6NMD0 228 aa4.57□□□□□ -1.68
PSEN1-216ENST00000556066 PEX7O00628 323 aa4.57□□□□□ -1.68
PSEN1-216ENST00000556066 GNRH2O43555 120 aa4.57□□□□□ -1.68
PSEN1-216ENST00000556066 SRIP30626 198 aa4.57□□□□□ -1.68
PSEN1-216ENST00000556066 FUSP35637 526 aaKnown RBP eCLIP4.57□□□□□ -1.68
PSEN1-216ENST00000556066 ERVFC1-1P60608 527 aa4.57□□□□□ -1.68
PSEN1-216ENST00000556066 Q6AWC8 147 aa4.57□□□□□ -1.68
PSEN1-216ENST00000556066 IMMP2LQ96T52 175 aa4.57□□□□□ -1.68
PSEN1-216ENST00000556066 KRTAP3-1Q9BYR8 98 aa4.57□□□□□ -1.68
PSEN1-216ENST00000556066 RNASE7Q9H1E1 156 aaKnown RBP4.57□□□□□ -1.68
PSEN1-216ENST00000556066 SCRT2Q9NQ03 307 aa4.57□□□□□ -1.68
PSEN1-216ENST00000556066 IL36BQ9NZH7 164 aa4.57□□□□□ -1.68
PSEN1-216ENST00000556066 EPDR1Q9UM22 224 aa4.57□□□□□ -1.68
PSEN1-216ENST00000556066 LENEPQ9Y5L5 61 aa4.57□□□□□ -1.68
PSEN1-216ENST00000556066 V9GYV3 84 aa4.57□□□□□ -1.68
PSEN1-216ENST00000556066 TRAV9-2A0A087WT02 112 aa4.56□□□□□ -1.68
PSEN1-216ENST00000556066 F5H697 171 aa4.56□□□□□ -1.68
PSEN1-216ENST00000556066 K7EQD1 137 aa4.56□□□□□ -1.68
PSEN1-216ENST00000556066 TYMSP04818 313 aa4.56□□□□□ -1.68
PSEN1-216ENST00000556066 MGST1P10620 155 aaKnown RBP4.56□□□□□ -1.68
PSEN1-216ENST00000556066 Q6ZRN7 208 aaPredicted RBP4.56□□□□□ -1.68
PSEN1-216ENST00000556066 RASL10AQ92737 203 aa4.56□□□□□ -1.68
PSEN1-216ENST00000556066 C12orf57Q99622 126 aa4.56□□□□□ -1.68
PSEN1-216ENST00000556066 MAP1LC3CQ9BXW4 147 aa4.56□□□□□ -1.68
PSEN1-216ENST00000556066 OSTCQ9NRP0 149 aa4.56□□□□□ -1.68
PSEN1-216ENST00000556066 FLG2Q5D862 2391 aaPredicted RBP4.56□□□□□ -1.68
PSEN1-216ENST00000556066 MYCBP2O75592 4640 aa4.55□□□□□ -1.68
PSEN1-216ENST00000556066 TRAV4A0A0B4J268 109 aa4.55□□□□□ -1.68
PSEN1-216ENST00000556066 TRAV21A0A0B4J279 112 aa4.55□□□□□ -1.68
PSEN1-216ENST00000556066 IGHV3-16A0A0C4DH30 117 aa4.55□□□□□ -1.68
PSEN1-216ENST00000556066 LOC100131303A0A0U1RQF7 123 aa4.55□□□□□ -1.68
PSEN1-216ENST00000556066 M0R2P5 195 aa4.55□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms