RNA–Protein interactions for RNA: ENST00000555305.5

IFT43-209, Transcript of intraflagellar transport 43, humanhuman

TSL 2

Gene IFT43, Length 1,765 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT43-209ENST00000555305 NF1P21359 2839 aa10.53□□□□□ -0.72
IFT43-209ENST00000555305 IGHV3OR16-12A0A075B7B8 117 aa10.53□□□□□ -0.72
IFT43-209ENST00000555305 M0R143 59 aa10.53□□□□□ -0.72
IFT43-209ENST00000555305 PLNP26678 52 aa10.53□□□□□ -0.72
IFT43-209ENST00000555305 HNRNPA3P51991 378 aaKnown RBP10.53□□□□□ -0.72
IFT43-209ENST00000555305 RIPPLY3P57055 190 aa10.53□□□□□ -0.72
IFT43-209ENST00000555305 ODF1Q14990 250 aa10.53□□□□□ -0.72
IFT43-209ENST00000555305 MAJINQ3KP22 176 aa10.53□□□□□ -0.72
IFT43-209ENST00000555305 TMEM141Q96I45 108 aa10.53□□□□□ -0.72
IFT43-209ENST00000555305 ZMAT4Q9H898 229 aa10.53□□□□□ -0.72
IFT43-209ENST00000555305 NSD1Q96L73 2696 aaPredicted RBP10.53□□□□□ -0.72
IFT43-209ENST00000555305 MRPS16Q9Y3D3 137 aaKnown RBP10.52□□□□□ -0.72
IFT43-209ENST00000555305 TNFRSF18Q9Y5U5 241 aa10.52□□□□□ -0.72
IFT43-209ENST00000555305 CUBNO60494 3623 aa10.52□□□□□ -0.72
IFT43-209ENST00000555305 A0A087WX48 190 aa10.52□□□□□ -0.73
IFT43-209ENST00000555305 hDV102S1A0JD36 115 aa10.52□□□□□ -0.73
IFT43-209ENST00000555305 DPM2O94777 84 aa10.52□□□□□ -0.73
IFT43-209ENST00000555305 IGHV3-53P01767 116 aa10.52□□□□□ -0.73
IFT43-209ENST00000555305 GIG44P09565 113 aaPredicted RBP10.52□□□□□ -0.73
IFT43-209ENST00000555305 RPL35AP18077 110 aaKnown RBP10.52□□□□□ -0.73
IFT43-209ENST00000555305 AZU1P20160 251 aa10.52□□□□□ -0.73
IFT43-209ENST00000555305 SLC25A34Q6PIV7 304 aa10.52□□□□□ -0.73
IFT43-209ENST00000555305 WFDC9Q8NEX5 89 aa10.52□□□□□ -0.73
IFT43-209ENST00000555305 SORL1Q92673 2214 aa10.51□□□□□ -0.73
IFT43-209ENST00000555305 IGKCP01834 107 aa10.51□□□□□ -0.73
IFT43-209ENST00000555305 RRN3P1Q2M238 152 aa10.51□□□□□ -0.73
IFT43-209ENST00000555305 CSNK1G2-AS1Q8NCQ2 148 aa10.51□□□□□ -0.73
IFT43-209ENST00000555305 TIMM17AQ99595 171 aa10.51□□□□□ -0.73
IFT43-209ENST00000555305 FN1P02751 2386 aaKnown RBP10.5□□□□□ -0.73
IFT43-209ENST00000555305 WIPF1O43516 503 aa10.5□□□□□ -0.73
IFT43-209ENST00000555305 OR4C5Q8NGB2 326 aa10.5□□□□□ -0.73
IFT43-209ENST00000555305 MRPL16Q9NX20 251 aaKnown RBP10.5□□□□□ -0.73
IFT43-209ENST00000555305 TRGV1A0A0A0MS02 117 aa10.49□□□□□ -0.73
IFT43-209ENST00000555305 WFDC10AQ9H1F0 79 aa10.49□□□□□ -0.73
IFT43-209ENST00000555305 TRAV4A0A0B4J268 109 aa10.49□□□□□ -0.73
IFT43-209ENST00000555305 F8VRH5 84 aa10.49□□□□□ -0.73
IFT43-209ENST00000555305 COX8AP10176 69 aa10.49□□□□□ -0.73
IFT43-209ENST00000555305 PAPPA-AS1Q5QFB9 102 aa10.49□□□□□ -0.73
IFT43-209ENST00000555305 NEXN-AS1Q8NBZ9 246 aa10.49□□□□□ -0.73
IFT43-209ENST00000555305 TP53TG1Q9Y2A0 90 aa10.49□□□□□ -0.73
IFT43-209ENST00000555305 SETXQ7Z333 2677 aaKnown RBP10.48□□□□□ -0.73
IFT43-209ENST00000555305 TRBV10-1A0A0K0K1A3 114 aa10.48□□□□□ -0.73
IFT43-209ENST00000555305 SMIM9A6NGZ8 99 aa10.48□□□□□ -0.73
IFT43-209ENST00000555305 PRM2P04554 102 aa10.48□□□□□ -0.73
IFT43-209ENST00000555305 NPSP0C0P6 89 aa10.48□□□□□ -0.73
IFT43-209ENST00000555305 KIR2DL5BQ8NHK3 375 aa10.48□□□□□ -0.73
IFT43-209ENST00000555305 OVOL2Q9BRP0 275 aa10.48□□□□□ -0.73
IFT43-209ENST00000555305 DKK2Q9UBU2 259 aa10.48□□□□□ -0.73
IFT43-209ENST00000555305 HIVEP1P15822 2718 aa10.48□□□□□ -0.73
IFT43-209ENST00000555305 IGIPA6NJ69 53 aa10.47□□□□□ -0.73
IFT43-209ENST00000555305 NEGR1Q7Z3B1 354 aa10.47□□□□□ -0.73
IFT43-209ENST00000555305 IGHV3-73A0A0B4J1V6 119 aa10.47□□□□□ -0.73
IFT43-209ENST00000555305 DLEU1O43261 78 aa10.47□□□□□ -0.73
IFT43-209ENST00000555305 TSHBP01222 138 aa10.47□□□□□ -0.73
IFT43-209ENST00000555305 BAALCQ8WXS3 180 aa10.47□□□□□ -0.73
IFT43-209ENST00000555305 CHTOPQ9Y3Y2 248 aaKnown RBP10.47□□□□□ -0.73
IFT43-209ENST00000555305 C2CD3Q4AC94 2353 aa10.47□□□□□ -0.73
IFT43-209ENST00000555305 WNK1Q9H4A3 2382 aa10.46□□□□□ -0.73
IFT43-209ENST00000555305 APOC4P55056 127 aa10.46□□□□□ -0.74
IFT43-209ENST00000555305 C20orf203Q8NBC4 194 aa10.46□□□□□ -0.74
IFT43-209ENST00000555305 MRPL35Q9NZE8 188 aaKnown RBP10.46□□□□□ -0.74
IFT43-209ENST00000555305 CRYBA4P53673 196 aa10.45□□□□□ -0.74
IFT43-209ENST00000555305 PMVKQ15126 192 aa10.45□□□□□ -0.74
IFT43-209ENST00000555305 SNHG12Q9BXW3 62 aa10.45□□□□□ -0.74
IFT43-209ENST00000555305 NOP10Q9NPE3 64 aaKnown RBP10.45□□□□□ -0.74
IFT43-209ENST00000555305 HHLA3Q9XRX5 114 aa10.45□□□□□ -0.74
IFT43-209ENST00000555305 SIVA1O15304 175 aa10.44□□□□□ -0.74
IFT43-209ENST00000555305 PYGO1Q9Y3Y4 419 aa10.44□□□□□ -0.74
IFT43-209ENST00000555305 SETD2Q9BYW2 2564 aaPredicted RBP10.44□□□□□ -0.74
IFT43-209ENST00000555305 STPG4Q8N801 248 aa10.44□□□□□ -0.74
IFT43-209ENST00000555305 TRGV2A0A075B6R0 118 aa10.43□□□□□ -0.74
IFT43-209ENST00000555305 PLAC8L1A1L4L8 177 aa10.43□□□□□ -0.74
IFT43-209ENST00000555305 RPL36AP83881 106 aaKnown RBP10.43□□□□□ -0.74
IFT43-209ENST00000555305 ANKRD39Q53RE8 183 aa10.43□□□□□ -0.74
IFT43-209ENST00000555305 C12orf54Q6X4T0 127 aa10.43□□□□□ -0.74
IFT43-209ENST00000555305 Q6ZTI0 123 aa10.43□□□□□ -0.74
IFT43-209ENST00000555305 RPL36ALQ969Q0 106 aaKnown RBP10.43□□□□□ -0.74
IFT43-209ENST00000555305 TRBV7-3A0A075B6L6 115 aa10.42□□□□□ -0.74
IFT43-209ENST00000555305 PRSS29PA6NIE9 313 aa10.42□□□□□ -0.74
IFT43-209ENST00000555305 K7EQD1 137 aa10.42□□□□□ -0.74
IFT43-209ENST00000555305 SMAGPQ0VAQ4 97 aa10.42□□□□□ -0.74
IFT43-209ENST00000555305 COTL1Q14019 142 aa10.42□□□□□ -0.74
IFT43-209ENST00000555305 ZC2HC1BQ5TFG8 222 aa10.42□□□□□ -0.74
IFT43-209ENST00000555305 SHISA2Q6UWI4 295 aa10.42□□□□□ -0.74
IFT43-209ENST00000555305 DAZ4Q86SG3 579 aaKnown RBP10.42□□□□□ -0.74
IFT43-209ENST00000555305 BOD1L2Q8IYS8 172 aa10.42□□□□□ -0.74
IFT43-209ENST00000555305 DAZ3Q9NR90 486 aaKnown RBP10.42□□□□□ -0.74
IFT43-209ENST00000555305 Q6ZSN1 163 aa10.42□□□□□ -0.74
IFT43-209ENST00000555305 TRBV6-4A0A1B0GX49 114 aa10.41□□□□□ -0.74
IFT43-209ENST00000555305 EREGO14944 169 aa10.41□□□□□ -0.74
IFT43-209ENST00000555305 P0DMU3 169 aa10.41□□□□□ -0.74
IFT43-209ENST00000555305 FAM231AP0DMU4 169 aa10.41□□□□□ -0.74
IFT43-209ENST00000555305 FAM231CP0DMU5 169 aa10.41□□□□□ -0.74
IFT43-209ENST00000555305 TMEM97Q5BJF2 176 aa10.41□□□□□ -0.74
IFT43-209ENST00000555305 ZNF479Q96JC4 524 aa10.41□□□□□ -0.74
IFT43-209ENST00000555305 CST9LQ9H4G1 147 aa10.41□□□□□ -0.74
IFT43-209ENST00000555305 SPANXA1Q9NS26 97 aa10.41□□□□□ -0.74
IFT43-209ENST00000555305 NMUP48645 174 aa10.4□□□□□ -0.74
IFT43-209ENST00000555305 RPL39P62891 51 aaKnown RBP10.4□□□□□ -0.74
IFT43-209ENST00000555305 KRTAP24-1Q3LI83 254 aa10.4□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms