RNA–Protein interactions for RNA: ENST00000554975.5

SHMT2-216, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 3

Gene SHMT2, Length 780 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-216ENST00000554975 SUMO2P61956 95 aaKnown RBP8.17□□□□□ -1.1
SHMT2-216ENST00000554975 SEC11AP67812 179 aa8.17□□□□□ -1.1
SHMT2-216ENST00000554975 FOXI2Q6ZQN5 318 aa8.17□□□□□ -1.1
SHMT2-216ENST00000554975 ORAOV1Q8WV07 137 aa8.17□□□□□ -1.1
SHMT2-216ENST00000554975 A8MZ25 164 aa8.16□□□□□ -1.1
SHMT2-216ENST00000554975 DPM2O94777 84 aa8.16□□□□□ -1.1
SHMT2-216ENST00000554975 LY6G6CO95867 125 aa8.16□□□□□ -1.1
SHMT2-216ENST00000554975 ZNF25P17030 456 aaPredicted RBP8.16□□□□□ -1.1
SHMT2-216ENST00000554975 PLNP26678 52 aa8.16□□□□□ -1.1
SHMT2-216ENST00000554975 POM121L12Q8N7R1 296 aa8.16□□□□□ -1.1
SHMT2-216ENST00000554975 IGKV3-7A0A075B6H7 116 aa8.15□□□□□ -1.1
SHMT2-216ENST00000554975 TRAV12-1A0A0B4J245 112 aa8.15□□□□□ -1.1
SHMT2-216ENST00000554975 J3KRW8 73 aa8.15□□□□□ -1.1
SHMT2-216ENST00000554975 MGPP08493 103 aa8.15□□□□□ -1.1
SHMT2-216ENST00000554975 CDKN1BP46527 198 aa8.15□□□□□ -1.1
SHMT2-216ENST00000554975 HINT1P49773 126 aaPredicted RBP8.15□□□□□ -1.1
SHMT2-216ENST00000554975 HSD52Q0P140 79 aa8.15□□□□□ -1.1
SHMT2-216ENST00000554975 ODF1Q14990 250 aa8.15□□□□□ -1.1
SHMT2-216ENST00000554975 TMEM97Q5BJF2 176 aa8.15□□□□□ -1.1
SHMT2-216ENST00000554975 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP8.14□□□□□ -1.11
SHMT2-216ENST00000554975 NUDT3O95989 172 aa8.14□□□□□ -1.11
SHMT2-216ENST00000554975 IGLV1-51P01701 117 aa8.14□□□□□ -1.11
SHMT2-216ENST00000554975 IGKCP01834 107 aa8.14□□□□□ -1.11
SHMT2-216ENST00000554975 PRSS1P07477 247 aa8.14□□□□□ -1.11
SHMT2-216ENST00000554975 ZNF688P0C7X2 276 aa8.14□□□□□ -1.11
SHMT2-216ENST00000554975 RNASE3P12724 160 aaKnown RBP8.14□□□□□ -1.11
SHMT2-216ENST00000554975 DYNLRB2Q8TF09 96 aa8.14□□□□□ -1.11
SHMT2-216ENST00000554975 TMEM208Q9BTX3 173 aa8.14□□□□□ -1.11
SHMT2-216ENST00000554975 ABCA13Q86UQ4 5058 aa8.14□□□□□ -1.11
SHMT2-216ENST00000554975 A6NDN8 102 aa8.13□□□□□ -1.11
SHMT2-216ENST00000554975 F6UB75 175 aa8.13□□□□□ -1.11
SHMT2-216ENST00000554975 CD7P09564 240 aa8.13□□□□□ -1.11
SHMT2-216ENST00000554975 PAPPA-AS1Q5QFB9 102 aa8.13□□□□□ -1.11
SHMT2-216ENST00000554975 BOD1L2Q8IYS8 172 aa8.13□□□□□ -1.11
SHMT2-216ENST00000554975 STPG4Q8N801 248 aa8.13□□□□□ -1.11
SHMT2-216ENST00000554975 C9orf85Q96MD7 179 aa8.13□□□□□ -1.11
SHMT2-216ENST00000554975 IGHV1OR15-1A0A075B7D0 117 aa8.12□□□□□ -1.11
SHMT2-216ENST00000554975 A0A087WX48 190 aa8.12□□□□□ -1.11
SHMT2-216ENST00000554975 A8MTW9 85 aa8.12□□□□□ -1.11
SHMT2-216ENST00000554975 ANKRD39Q53RE8 183 aa8.12□□□□□ -1.11
SHMT2-216ENST00000554975 BVES-AS1Q5T3Y7 98 aa8.12□□□□□ -1.11
SHMT2-216ENST00000554975 WFDC3Q8IUB2 231 aa8.12□□□□□ -1.11
SHMT2-216ENST00000554975 IL17DQ8TAD2 202 aa8.12□□□□□ -1.11
SHMT2-216ENST00000554975 TOMM6Q96B49 74 aa8.12□□□□□ -1.11
SHMT2-216ENST00000554975 C18orf15Q96N68 181 aa8.12□□□□□ -1.11
SHMT2-216ENST00000554975 HIGD1BQ9P298 99 aa8.12□□□□□ -1.11
SHMT2-216ENST00000554975 COX11Q9Y6N1 276 aa8.12□□□□□ -1.11
SHMT2-216ENST00000554975 VPS13DQ5THJ4 4388 aa8.12□□□□□ -1.11
SHMT2-216ENST00000554975 TRAV25A0A0B4J276 109 aa8.11□□□□□ -1.11
SHMT2-216ENST00000554975 F8VRH5 84 aa8.11□□□□□ -1.11
SHMT2-216ENST00000554975 H7C1H1 209 aa8.11□□□□□ -1.11
SHMT2-216ENST00000554975 GATA1P15976 413 aaPredicted RBP8.11□□□□□ -1.11
SHMT2-216ENST00000554975 MPV17L2Q567V2 206 aa8.11□□□□□ -1.11
SHMT2-216ENST00000554975 PIK3CD-AS1Q5SR53 167 aa8.11□□□□□ -1.11
SHMT2-216ENST00000554975 GTSCR1Q86UQ5 136 aa8.11□□□□□ -1.11
SHMT2-216ENST00000554975 C14orf178Q8N769 122 aaPredicted RBP8.11□□□□□ -1.11
SHMT2-216ENST00000554975 RASL10AQ92737 203 aa8.11□□□□□ -1.11
SHMT2-216ENST00000554975 KIR2DL4Q99706 377 aa8.11□□□□□ -1.11
SHMT2-216ENST00000554975 CYSLTR1Q9Y271 337 aa8.11□□□□□ -1.11
SHMT2-216ENST00000554975 SELENOKQ9Y6D0 94 aa8.11□□□□□ -1.11
SHMT2-216ENST00000554975 PKHD1P08F94 4074 aa8.1□□□□□ -1.11
SHMT2-216ENST00000554975 TRAV26-2A0A0B4J265 109 aa8.1□□□□□ -1.11
SHMT2-216ENST00000554975 TRAV12-3A0A0B4J271 114 aa8.1□□□□□ -1.11
SHMT2-216ENST00000554975 IGHV3-16A0A0C4DH30 117 aa8.1□□□□□ -1.11
SHMT2-216ENST00000554975 TRBV6-5A0A0K0K1A5 114 aa8.1□□□□□ -1.11
SHMT2-216ENST00000554975 FGF6P10767 208 aa8.1□□□□□ -1.11
SHMT2-216ENST00000554975 TFPI2P48307 235 aa8.1□□□□□ -1.11
SHMT2-216ENST00000554975 C2orf91Q6ZV80 131 aa8.1□□□□□ -1.11
SHMT2-216ENST00000554975 SCGB3A1Q96QR1 104 aa8.1□□□□□ -1.11
SHMT2-216ENST00000554975 EDN2P20800 178 aa8.09□□□□□ -1.11
SHMT2-216ENST00000554975 NMUP48645 174 aa8.09□□□□□ -1.11
SHMT2-216ENST00000554975 ZNF415Q09FC8 603 aa8.09□□□□□ -1.11
SHMT2-216ENST00000554975 RHOHQ15669 191 aa8.09□□□□□ -1.11
SHMT2-216ENST00000554975 CD300EQ496F6 205 aaPredicted RBP8.09□□□□□ -1.11
SHMT2-216ENST00000554975 TRPT1Q86TN4 253 aaKnown RBP8.09□□□□□ -1.11
SHMT2-216ENST00000554975 CLUHP3Q96NS8 147 aa8.09□□□□□ -1.11
SHMT2-216ENST00000554975 SPAG8Q99932 426 aaPredicted RBP8.09□□□□□ -1.11
SHMT2-216ENST00000554975 VCYO14598 125 aa8.08□□□□□ -1.12
SHMT2-216ENST00000554975 GNRH2O43555 120 aa8.08□□□□□ -1.12
SHMT2-216ENST00000554975 GAS8-AS1O95177 125 aa8.08□□□□□ -1.12
SHMT2-216ENST00000554975 DEFB1P60022 68 aa8.08□□□□□ -1.12
SHMT2-216ENST00000554975 HERVK_113P61574 105 aa8.08□□□□□ -1.12
SHMT2-216ENST00000554975 TAL2Q16559 108 aa8.08□□□□□ -1.12
SHMT2-216ENST00000554975 C2orf66Q6UXQ4 117 aa8.08□□□□□ -1.12
SHMT2-216ENST00000554975 ERASQ7Z444 233 aa8.08□□□□□ -1.12
SHMT2-216ENST00000554975 PTH2Q96A98 100 aa8.08□□□□□ -1.12
SHMT2-216ENST00000554975 TMEM141Q96I45 108 aa8.08□□□□□ -1.12
SHMT2-216ENST00000554975 LINC00467Q9BRT7 94 aa8.08□□□□□ -1.12
SHMT2-216ENST00000554975 CSTL1Q9H114 145 aa8.08□□□□□ -1.12
SHMT2-216ENST00000554975 DKK2Q9UBU2 259 aa8.08□□□□□ -1.12
SHMT2-216ENST00000554975 KIF25-AS1Q9Y6Z4 181 aa8.08□□□□□ -1.12
SHMT2-216ENST00000554975 DNAH6Q9C0G6 4158 aa8.07□□□□□ -1.12
SHMT2-216ENST00000554975 RHODO00212 210 aa8.07□□□□□ -1.12
SHMT2-216ENST00000554975 CMC4P56277 68 aaPredicted RBP8.07□□□□□ -1.12
SHMT2-216ENST00000554975 FXYD7P58549 80 aa8.07□□□□□ -1.12
SHMT2-216ENST00000554975 ZNF56Q15929 161 aa8.07□□□□□ -1.12
SHMT2-216ENST00000554975 SPINK13Q1W4C9 94 aa8.07□□□□□ -1.12
SHMT2-216ENST00000554975 DEFB114Q30KQ6 69 aa8.07□□□□□ -1.12
SHMT2-216ENST00000554975 ZC2HC1BQ5TFG8 222 aa8.07□□□□□ -1.12
SHMT2-216ENST00000554975 SUMO4Q6EEV6 95 aa8.07□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 59.9 ms