RNA–Protein interactions for RNA: ENST00000554636.1

VTI1B-203, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

TSL 3

Gene VTI1B, Length 565 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-203ENST00000554636 ORM1P02763 201 aa2.79□□□□□ -1.96
VTI1B-203ENST00000554636 DNAH10OSP0CZ25 163 aa2.79□□□□□ -1.96
VTI1B-203ENST00000554636 SRIP30626 198 aa2.79□□□□□ -1.96
VTI1B-203ENST00000554636 AKR1C3P42330 323 aa2.79□□□□□ -1.96
VTI1B-203ENST00000554636 PPT1P50897 306 aa2.79□□□□□ -1.96
VTI1B-203ENST00000554636 DSCR10P59022 87 aa2.79□□□□□ -1.96
VTI1B-203ENST00000554636 RHOHQ15669 191 aa2.79□□□□□ -1.96
VTI1B-203ENST00000554636 ZNF506Q5JVG8 444 aa2.79□□□□□ -1.96
VTI1B-203ENST00000554636 SAPCD1Q5SSQ6 148 aa2.79□□□□□ -1.96
VTI1B-203ENST00000554636 DNLZQ5SXM8 178 aa2.79□□□□□ -1.96
VTI1B-203ENST00000554636 CFAP126Q5VTH2 177 aa2.79□□□□□ -1.96
VTI1B-203ENST00000554636 NEGR1Q7Z3B1 354 aa2.79□□□□□ -1.96
VTI1B-203ENST00000554636 SPATA12Q7Z6I5 190 aa2.79□□□□□ -1.96
VTI1B-203ENST00000554636 PCNPQ8WW12 178 aaKnown RBP2.79□□□□□ -1.96
VTI1B-203ENST00000554636 MBD3L1Q8WWY6 194 aa2.79□□□□□ -1.96
VTI1B-203ENST00000554636 HIST1H2BAQ96A08 127 aa2.79□□□□□ -1.96
VTI1B-203ENST00000554636 TXNDC17Q9BRA2 123 aa2.79□□□□□ -1.96
VTI1B-203ENST00000554636 TCEAL7Q9BRU2 100 aa2.79□□□□□ -1.96
VTI1B-203ENST00000554636 PARLQ9H300 379 aa2.79□□□□□ -1.96
VTI1B-203ENST00000554636 A0A0D9SG52 128 aa2.78□□□□□ -1.96
VTI1B-203ENST00000554636 A0A1B0GV50 99 aa2.78□□□□□ -1.96
VTI1B-203ENST00000554636 TRBV6-4A0A1B0GX49 114 aa2.78□□□□□ -1.96
VTI1B-203ENST00000554636 KANTRA0A1W2PQU2 76 aa2.78□□□□□ -1.96
VTI1B-203ENST00000554636 FABP5P3A8MUU1 101 aa2.78□□□□□ -1.96
VTI1B-203ENST00000554636 KRBOX1C9JBD0 128 aa2.78□□□□□ -1.96
VTI1B-203ENST00000554636 H3BVH4 76 aa2.78□□□□□ -1.96
VTI1B-203ENST00000554636 LTAP01374 205 aa2.78□□□□□ -1.96
VTI1B-203ENST00000554636 SEC11BP0C7V7 166 aa2.78□□□□□ -1.96
VTI1B-203ENST00000554636 ASIPP42127 132 aa2.78□□□□□ -1.96
VTI1B-203ENST00000554636 GAGE2BQ13066 116 aa2.78□□□□□ -1.96
VTI1B-203ENST00000554636 ZNF674Q2M3X9 581 aa2.78□□□□□ -1.96
VTI1B-203ENST00000554636 GAGE2EQ4V326 116 aa2.78□□□□□ -1.96
VTI1B-203ENST00000554636 CST9LP1Q5W188 147 aa2.78□□□□□ -1.96
VTI1B-203ENST00000554636 GAGE2AQ6NT46 116 aa2.78□□□□□ -1.96
VTI1B-203ENST00000554636 UFSP1Q6NVU6 142 aa2.78□□□□□ -1.96
VTI1B-203ENST00000554636 SLC25A29Q8N8R3 303 aa2.78□□□□□ -1.96
VTI1B-203ENST00000554636 STOML3Q8TAV4 291 aa2.78□□□□□ -1.96
VTI1B-203ENST00000554636 FAM213BQ8TBF2 198 aa2.78□□□□□ -1.96
VTI1B-203ENST00000554636 FMC1Q96HJ9 113 aa2.78□□□□□ -1.96
VTI1B-203ENST00000554636 ZNF471Q9BX82 626 aaPredicted RBP2.78□□□□□ -1.96
VTI1B-203ENST00000554636 NKX6-2Q9C056 277 aaPredicted RBP2.78□□□□□ -1.96
VTI1B-203ENST00000554636 IL36BQ9NZH7 164 aa2.78□□□□□ -1.96
VTI1B-203ENST00000554636 GAGE2DQ9UEU5 116 aa2.78□□□□□ -1.96
VTI1B-203ENST00000554636 ZFP30Q9Y2G7 519 aa2.78□□□□□ -1.96
VTI1B-203ENST00000554636 IGLV7-46A0A075B6I9 117 aa2.77□□□□□ -1.97
VTI1B-203ENST00000554636 A0A087WTM6 91 aa2.77□□□□□ -1.97
VTI1B-203ENST00000554636 GRIFINA4D1Z8 144 aa2.77□□□□□ -1.97
VTI1B-203ENST00000554636 A8MWV9 139 aa2.77□□□□□ -1.97
VTI1B-203ENST00000554636 B4DEV8 164 aa2.77□□□□□ -1.97
VTI1B-203ENST00000554636 UMAD1C9J7I0 102 aa2.77□□□□□ -1.97
VTI1B-203ENST00000554636 M0R036 132 aa2.77□□□□□ -1.97
VTI1B-203ENST00000554636 CDK2AP2O75956 126 aa2.77□□□□□ -1.97
VTI1B-203ENST00000554636 CXCL1P09341 107 aa2.77□□□□□ -1.97
VTI1B-203ENST00000554636 ARMS2P0C7Q2 107 aa2.77□□□□□ -1.97
VTI1B-203ENST00000554636 MGST1P10620 155 aaKnown RBP2.77□□□□□ -1.97
VTI1B-203ENST00000554636 TPT1P13693 172 aaKnown RBP2.77□□□□□ -1.97
VTI1B-203ENST00000554636 S100A4P26447 101 aaKnown RBP2.77□□□□□ -1.97
VTI1B-203ENST00000554636 FUSP35637 526 aaKnown RBP eCLIP2.77□□□□□ -1.97
VTI1B-203ENST00000554636 UBE2G1P62253 170 aa2.77□□□□□ -1.97
VTI1B-203ENST00000554636 EIF5AP63241 154 aaKnown RBP2.77□□□□□ -1.97
VTI1B-203ENST00000554636 RPL19P84098 196 aaKnown RBP2.77□□□□□ -1.97
VTI1B-203ENST00000554636 LGALSLQ3ZCW2 172 aaPredicted RBP2.77□□□□□ -1.97
VTI1B-203ENST00000554636 LINC01556Q5JQF7 62 aa2.77□□□□□ -1.97
VTI1B-203ENST00000554636 FAM162BQ5T6X4 162 aa2.77□□□□□ -1.97
VTI1B-203ENST00000554636 LELP1Q5T871 98 aa2.77□□□□□ -1.97
VTI1B-203ENST00000554636 ZFP2Q6ZN57 461 aa2.77□□□□□ -1.97
VTI1B-203ENST00000554636 TMUB2Q71RG4 321 aa2.77□□□□□ -1.97
VTI1B-203ENST00000554636 SH2D6Q7Z4S9 175 aa2.77□□□□□ -1.97
VTI1B-203ENST00000554636 TCTE3Q8IZS6 198 aa2.77□□□□□ -1.97
VTI1B-203ENST00000554636 C14orf178Q8N769 122 aaPredicted RBP2.77□□□□□ -1.97
VTI1B-203ENST00000554636 NHLRC2Q8NBF2 726 aa2.77□□□□□ -1.97
VTI1B-203ENST00000554636 SFT2D1Q8WV19 159 aa2.77□□□□□ -1.97
VTI1B-203ENST00000554636 C11orf52Q96A22 123 aa2.77□□□□□ -1.97
VTI1B-203ENST00000554636 PRADC1Q9BSG0 188 aa2.77□□□□□ -1.97
VTI1B-203ENST00000554636 SAMD10Q9BYL1 202 aa2.77□□□□□ -1.97
VTI1B-203ENST00000554636 JPT2Q9H910 190 aa2.77□□□□□ -1.97
VTI1B-203ENST00000554636 Q9UF83 564 aa2.77□□□□□ -1.97
VTI1B-203ENST00000554636 LY96Q9Y6Y9 160 aa2.77□□□□□ -1.97
VTI1B-203ENST00000554636 FAT3Q8TDW7 4589 aa2.77□□□□□ -1.97
VTI1B-203ENST00000554636 HERC1Q15751 4861 aa2.76□□□□□ -1.97
VTI1B-203ENST00000554636 TMSB15BA0A087X1C1 80 aa2.76□□□□□ -1.97
VTI1B-203ENST00000554636 TRAV1-1A0A0B4J248 108 aa2.76□□□□□ -1.97
VTI1B-203ENST00000554636 IGHV3-38A0A0C4DH36 116 aa2.76□□□□□ -1.97
VTI1B-203ENST00000554636 K7EP13 123 aa2.76□□□□□ -1.97
VTI1B-203ENST00000554636 PFDN1O60925 122 aa2.76□□□□□ -1.97
VTI1B-203ENST00000554636 CRYGDP07320 174 aa2.76□□□□□ -1.97
VTI1B-203ENST00000554636 EVI2AP22794 236 aa2.76□□□□□ -1.97
VTI1B-203ENST00000554636 CCL20P78556 96 aa2.76□□□□□ -1.97
VTI1B-203ENST00000554636 KRTAP5-1Q6L8H4 278 aa2.76□□□□□ -1.97
VTI1B-203ENST00000554636 ZFP82Q8N141 532 aa2.76□□□□□ -1.97
VTI1B-203ENST00000554636 C10orf126Q8N4M7 172 aa2.76□□□□□ -1.97
VTI1B-203ENST00000554636 ATP6V0E2Q8NHE4 81 aa2.76□□□□□ -1.97
VTI1B-203ENST00000554636 SFRP2Q96HF1 295 aa2.76□□□□□ -1.97
VTI1B-203ENST00000554636 GTSF1LQ9H1H1 148 aa2.76□□□□□ -1.97
VTI1B-203ENST00000554636 RPS10P5Q9NQ39 176 aa2.76□□□□□ -1.97
VTI1B-203ENST00000554636 TRAV9-2A0A087WT02 112 aa2.75□□□□□ -1.97
VTI1B-203ENST00000554636 TRAV8-6A0A0B4J262 113 aa2.75□□□□□ -1.97
VTI1B-203ENST00000554636 LRCOL1A6NCL2 159 aa2.75□□□□□ -1.97
VTI1B-203ENST00000554636 IBA57-AS1B1ANH7 110 aa2.75□□□□□ -1.97
VTI1B-203ENST00000554636 M0R381 172 aa2.75□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 82.6 ms