RNA–Protein interactions for RNA: ENST00000554514.1

ARHGEF40-203, Transcript of Rho guanine nucleotide exchange factor 40, humanhuman

TSL 1 (best)

Gene ARHGEF40, Length 2,928 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF40-203ENST00000554514 DEFB131AP59861 70 aa11.59□□□□□ -0.55
ARHGEF40-203ENST00000554514 RBMY1A1P0DJD3 496 aaKnown RBP11.59□□□□□ -0.55
ARHGEF40-203ENST00000554514 RBMY1CP0DJD4 496 aa11.59□□□□□ -0.55
ARHGEF40-203ENST00000554514 P0DMU3 169 aa11.59□□□□□ -0.55
ARHGEF40-203ENST00000554514 FAM231AP0DMU4 169 aa11.59□□□□□ -0.55
ARHGEF40-203ENST00000554514 FAM231CP0DMU5 169 aa11.59□□□□□ -0.55
ARHGEF40-203ENST00000554514 RBMY1FQ15415 496 aaKnown RBP11.59□□□□□ -0.55
ARHGEF40-203ENST00000554514 ZNRF2Q8NHG8 242 aa11.58□□□□□ -0.56
ARHGEF40-203ENST00000554514 TEX48A0A1B0GUV7 120 aa11.58□□□□□ -0.56
ARHGEF40-203ENST00000554514 APOMO95445 188 aa11.58□□□□□ -0.56
ARHGEF40-203ENST00000554514 CRYBA4P53673 196 aa11.58□□□□□ -0.56
ARHGEF40-203ENST00000554514 PROK1P58294 105 aa11.58□□□□□ -0.56
ARHGEF40-203ENST00000554514 HERVK_113P61574 105 aa11.58□□□□□ -0.56
ARHGEF40-203ENST00000554514 WFDC2Q14508 124 aa11.58□□□□□ -0.56
ARHGEF40-203ENST00000554514 TRAV26-1A0A087WT03 109 aa11.57□□□□□ -0.56
ARHGEF40-203ENST00000554514 TRBV27A0A0K0K1C4 114 aa11.57□□□□□ -0.56
ARHGEF40-203ENST00000554514 G3V4G9 280 aa11.57□□□□□ -0.56
ARHGEF40-203ENST00000554514 TSPEAR-AS2P59090 65 aa11.57□□□□□ -0.56
ARHGEF40-203ENST00000554514 Q6YL49 198 aa11.57□□□□□ -0.56
ARHGEF40-203ENST00000554514 FOXI2Q6ZQN5 318 aa11.57□□□□□ -0.56
ARHGEF40-203ENST00000554514 PGPEP1Q9NXJ5 209 aa11.57□□□□□ -0.56
ARHGEF40-203ENST00000554514 WNK1Q9H4A3 2382 aa11.57□□□□□ -0.56
ARHGEF40-203ENST00000554514 ELANEP08246 267 aa11.57□□□□□ -0.56
ARHGEF40-203ENST00000554514 IGHV4-31P0DP07 118 aa11.57□□□□□ -0.56
ARHGEF40-203ENST00000554514 RRN3P1Q2M238 152 aa11.57□□□□□ -0.56
ARHGEF40-203ENST00000554514 MRPL16Q9NX20 251 aaKnown RBP11.57□□□□□ -0.56
ARHGEF40-203ENST00000554514 J3QLI3 93 aa11.56□□□□□ -0.56
ARHGEF40-203ENST00000554514 UBE2E2Q96LR5 201 aa11.56□□□□□ -0.56
ARHGEF40-203ENST00000554514 ODF3Q96PU9 254 aa11.56□□□□□ -0.56
ARHGEF40-203ENST00000554514 TMEM141Q96I45 108 aa11.56□□□□□ -0.56
ARHGEF40-203ENST00000554514 ZNF469Q96JG9 3925 aaPredicted RBP11.56□□□□□ -0.56
ARHGEF40-203ENST00000554514 TMEM89A2RUT3 159 aa11.56□□□□□ -0.56
ARHGEF40-203ENST00000554514 RPL32P62910 135 aaKnown RBP11.56□□□□□ -0.56
ARHGEF40-203ENST00000554514 TRPT1Q86TN4 253 aaKnown RBP11.56□□□□□ -0.56
ARHGEF40-203ENST00000554514 BBC3Q96PG8 261 aaPredicted RBP11.56□□□□□ -0.56
ARHGEF40-203ENST00000554514 EPG5Q9HCE0 2579 aa11.55□□□□□ -0.56
ARHGEF40-203ENST00000554514 LINC01549A6NIU2 74 aa11.55□□□□□ -0.56
ARHGEF40-203ENST00000554514 TIMM17AQ99595 171 aa11.55□□□□□ -0.56
ARHGEF40-203ENST00000554514 SH2D6Q7Z4S9 175 aa11.55□□□□□ -0.56
ARHGEF40-203ENST00000554514 NOTCH3Q9UM47 2321 aa11.54□□□□□ -0.56
ARHGEF40-203ENST00000554514 SETD2Q9BYW2 2564 aaPredicted RBP11.54□□□□□ -0.56
ARHGEF40-203ENST00000554514 LOC107984156A0A0G2JMH3 177 aa11.54□□□□□ -0.56
ARHGEF40-203ENST00000554514 TRBV6-5A0A0K0K1A5 114 aa11.54□□□□□ -0.56
ARHGEF40-203ENST00000554514 RNASE13Q5GAN3 156 aaKnown RBP11.54□□□□□ -0.56
ARHGEF40-203ENST00000554514 ARL17AQ8IVW1 177 aa11.54□□□□□ -0.56
ARHGEF40-203ENST00000554514 TRGV11A0A075B6L2 103 aa11.53□□□□□ -0.56
ARHGEF40-203ENST00000554514 PAPPA-AS1Q5QFB9 102 aa11.53□□□□□ -0.56
ARHGEF40-203ENST00000554514 C11orf44Q8N8P7 122 aa11.53□□□□□ -0.56
ARHGEF40-203ENST00000554514 Q9UF83 564 aa11.53□□□□□ -0.56
ARHGEF40-203ENST00000554514 CR1P17927 2039 aa11.53□□□□□ -0.56
ARHGEF40-203ENST00000554514 ETDBQ3ZM63 59 aa11.53□□□□□ -0.56
ARHGEF40-203ENST00000554514 CEMP1Q6PRD7 247 aaPredicted RBP11.53□□□□□ -0.56
ARHGEF40-203ENST00000554514 TMEM61Q8N0U2 210 aa11.53□□□□□ -0.56
ARHGEF40-203ENST00000554514 A0A0J9YY99 117 aa11.52□□□□□ -0.57
ARHGEF40-203ENST00000554514 I3L3M4 83 aa11.52□□□□□ -0.57
ARHGEF40-203ENST00000554514 LGALS3P17931 250 aaKnown RBP11.52□□□□□ -0.57
ARHGEF40-203ENST00000554514 NACAE9PAV3 2078 aa11.52□□□□□ -0.57
ARHGEF40-203ENST00000554514 CCDC168Q8NDH2 2452 aa11.52□□□□□ -0.57
ARHGEF40-203ENST00000554514 CHD6Q8TD26 2715 aa11.52□□□□□ -0.57
ARHGEF40-203ENST00000554514 RBMY1BA6NDE4 496 aaKnown RBP11.52□□□□□ -0.57
ARHGEF40-203ENST00000554514 RBMY1EA6NEQ0 496 aaKnown RBP11.52□□□□□ -0.57
ARHGEF40-203ENST00000554514 RBMY1DP0C7P1 496 aaKnown RBP11.52□□□□□ -0.57
ARHGEF40-203ENST00000554514 A0A0J9YXV3 536 aa11.51□□□□□ -0.57
ARHGEF40-203ENST00000554514 Q96MF0 132 aa11.51□□□□□ -0.57
ARHGEF40-203ENST00000554514 PRRC2AP48634 2157 aaKnown RBP11.51□□□□□ -0.57
ARHGEF40-203ENST00000554514 LINC01619G3V211 115 aa11.51□□□□□ -0.57
ARHGEF40-203ENST00000554514 J3QQQ9 107 aa11.51□□□□□ -0.57
ARHGEF40-203ENST00000554514 GAGE13Q4V321 117 aa11.51□□□□□ -0.57
ARHGEF40-203ENST00000554514 C20orf203Q8NBC4 194 aa11.51□□□□□ -0.57
ARHGEF40-203ENST00000554514 NSUN5P1Q3KNT7 163 aa11.5□□□□□ -0.57
ARHGEF40-203ENST00000554514 DYNLRB2Q8TF09 96 aa11.5□□□□□ -0.57
ARHGEF40-203ENST00000554514 NBPF19A0A087WUL8 3843 aa11.5□□□□□ -0.57
ARHGEF40-203ENST00000554514 A0A1B0GWB2 263 aa11.5□□□□□ -0.57
ARHGEF40-203ENST00000554514 VCX2Q9H322 139 aa11.5□□□□□ -0.57
ARHGEF40-203ENST00000554514 H3BMM0 161 aa11.49□□□□□ -0.57
ARHGEF40-203ENST00000554514 PSMB2P49721 201 aa11.49□□□□□ -0.57
ARHGEF40-203ENST00000554514 RHOHQ15669 191 aa11.49□□□□□ -0.57
ARHGEF40-203ENST00000554514 DLX4Q92988 240 aaPredicted RBP11.49□□□□□ -0.57
ARHGEF40-203ENST00000554514 A0A1W2PRX2 142 aa11.49□□□□□ -0.57
ARHGEF40-203ENST00000554514 TSPAN13O95857 204 aa11.49□□□□□ -0.57
ARHGEF40-203ENST00000554514 SMAGPQ0VAQ4 97 aa11.49□□□□□ -0.57
ARHGEF40-203ENST00000554514 SPAG8Q99932 426 aaPredicted RBP11.49□□□□□ -0.57
ARHGEF40-203ENST00000554514 NF1P21359 2839 aa11.49□□□□□ -0.57
ARHGEF40-203ENST00000554514 F8W1H4 67 aa11.49□□□□□ -0.57
ARHGEF40-203ENST00000554514 FSHBP01225 129 aa11.49□□□□□ -0.57
ARHGEF40-203ENST00000554514 LINC01587Q99440 93 aa11.49□□□□□ -0.57
ARHGEF40-203ENST00000554514 IGLV4-3A0A075B6K6 122 aa11.48□□□□□ -0.57
ARHGEF40-203ENST00000554514 IGHV3OR16-12A0A075B7B8 117 aa11.48□□□□□ -0.57
ARHGEF40-203ENST00000554514 IGHV3-38A0A0C4DH36 116 aa11.48□□□□□ -0.57
ARHGEF40-203ENST00000554514 ADARB2-AS1A8MUL3 147 aa11.48□□□□□ -0.57
ARHGEF40-203ENST00000554514 CD28P10747 220 aa11.48□□□□□ -0.57
ARHGEF40-203ENST00000554514 SPANXB1Q9NS25 103 aaPredicted RBP11.48□□□□□ -0.57
ARHGEF40-203ENST00000554514 TNFRSF18Q9Y5U5 241 aa11.48□□□□□ -0.57
ARHGEF40-203ENST00000554514 Q6ZSN1 163 aa11.48□□□□□ -0.57
ARHGEF40-203ENST00000554514 SPXQ9BT56 116 aa11.48□□□□□ -0.57
ARHGEF40-203ENST00000554514 ZNF418Q8TF45 676 aaPredicted RBP11.47□□□□□ -0.57
ARHGEF40-203ENST00000554514 DEFB113Q30KQ7 82 aa11.47□□□□□ -0.57
ARHGEF40-203ENST00000554514 GTSF1LQ9H1H1 148 aa11.47□□□□□ -0.57
ARHGEF40-203ENST00000554514 UBR5O95071 2799 aaPredicted RBP11.47□□□□□ -0.57
ARHGEF40-203ENST00000554514 TRAV2A0A0B4J234 112 aa11.46□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 64.2 ms