RNA–Protein interactions for RNA: ENST00000554079.1

SIX4-202, Transcript of SIX homeobox 4, humanhuman

TSL 1 (best)

Gene SIX4, Length 2,003 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX4-202ENST00000554079 OPRPNQ99935 248 aaPredicted RBP7.08□□□□□ -1.28
SIX4-202ENST00000554079 SLC25A15Q9Y619 301 aa7.08□□□□□ -1.28
SIX4-202ENST00000554079 CADP27708 2225 aa7.08□□□□□ -1.28
SIX4-202ENST00000554079 A0A0J9YXV3 536 aa7.07□□□□□ -1.28
SIX4-202ENST00000554079 LINC00315P59091 139 aa7.07□□□□□ -1.28
SIX4-202ENST00000554079 Q8N2B8 174 aa7.07□□□□□ -1.28
SIX4-202ENST00000554079 SPRR3Q9UBC9 169 aa7.07□□□□□ -1.28
SIX4-202ENST00000554079 UBE2D4Q9Y2X8 147 aa7.07□□□□□ -1.28
SIX4-202ENST00000554079 KIF25-AS1Q9Y6Z4 181 aa7.07□□□□□ -1.28
SIX4-202ENST00000554079 SMIM26A0A096LP01 95 aa7.06□□□□□ -1.28
SIX4-202ENST00000554079 LOXP28300 417 aaPredicted RBP7.06□□□□□ -1.28
SIX4-202ENST00000554079 LPAL2Q16609 132 aa7.06□□□□□ -1.28
SIX4-202ENST00000554079 C9orf47Q6ZRZ4 202 aa7.06□□□□□ -1.28
SIX4-202ENST00000554079 RNASE6Q93091 150 aaKnown RBP7.06□□□□□ -1.28
SIX4-202ENST00000554079 MED13Q9UHV7 2174 aa7.06□□□□□ -1.28
SIX4-202ENST00000554079 CACNA1HO95180 2353 aa7.05□□□□□ -1.28
SIX4-202ENST00000554079 VCYO14598 125 aa7.05□□□□□ -1.28
SIX4-202ENST00000554079 TIMM17BO60830 172 aa7.05□□□□□ -1.28
SIX4-202ENST00000554079 MED14OSP0DP75 135 aa7.05□□□□□ -1.28
SIX4-202ENST00000554079 CCL4P13236 92 aa7.05□□□□□ -1.28
SIX4-202ENST00000554079 FANCD2OSQ96PS1 177 aa7.05□□□□□ -1.28
SIX4-202ENST00000554079 LINC00846Q9NV44 126 aa7.05□□□□□ -1.28
SIX4-202ENST00000554079 A0A0U1RQV1 116 aa7.05□□□□□ -1.28
SIX4-202ENST00000554079 H7BZZ5 65 aa7.05□□□□□ -1.28
SIX4-202ENST00000554079 NXPH4O95158 308 aa7.05□□□□□ -1.28
SIX4-202ENST00000554079 MRPL53Q96EL3 112 aaKnown RBP7.05□□□□□ -1.28
SIX4-202ENST00000554079 ARRDC1-AS1Q9H2J1 176 aa7.05□□□□□ -1.28
SIX4-202ENST00000554079 NDUFA12Q9UI09 145 aa7.05□□□□□ -1.28
SIX4-202ENST00000554079 IGLV11-55A0A075B6I3 123 aa7.04□□□□□ -1.28
SIX4-202ENST00000554079 TRBV27A0A0K0K1C4 114 aa7.04□□□□□ -1.28
SIX4-202ENST00000554079 GHRHP01286 108 aa7.04□□□□□ -1.28
SIX4-202ENST00000554079 IGHV1-46P01743 117 aa7.04□□□□□ -1.28
SIX4-202ENST00000554079 XCL1P47992 114 aa7.04□□□□□ -1.28
SIX4-202ENST00000554079 SUMO4Q6EEV6 95 aa7.04□□□□□ -1.28
SIX4-202ENST00000554079 FAM218AQ96MZ4 157 aa7.04□□□□□ -1.28
SIX4-202ENST00000554079 XCL2Q9UBD3 114 aa7.04□□□□□ -1.28
SIX4-202ENST00000554079 PHLDA3Q9Y5J5 127 aa7.04□□□□□ -1.28
SIX4-202ENST00000554079 IGLV3-9A0A075B6K5 115 aa7.03□□□□□ -1.28
SIX4-202ENST00000554079 IGHV1-3A0A0C4DH29 117 aa7.03□□□□□ -1.28
SIX4-202ENST00000554079 IGHV1-58A0A0C4DH39 117 aa7.03□□□□□ -1.28
SIX4-202ENST00000554079 IGHG2P01859 326 aa7.03□□□□□ -1.28
SIX4-202ENST00000554079 LYPD5Q6UWN5 251 aa7.03□□□□□ -1.28
SIX4-202ENST00000554079 IGLV4-3A0A075B6K6 122 aa7.03□□□□□ -1.28
SIX4-202ENST00000554079 BUB1B-PAK6H3BSN5 160 aa7.03□□□□□ -1.28
SIX4-202ENST00000554079 DNAL4O96015 105 aa7.03□□□□□ -1.28
SIX4-202ENST00000554079 C20orf197Q8N268 126 aa7.03□□□□□ -1.28
SIX4-202ENST00000554079 LINC00482Q8N8I6 264 aa7.03□□□□□ -1.28
SIX4-202ENST00000554079 DEFB127Q9H1M4 99 aa7.03□□□□□ -1.28
SIX4-202ENST00000554079 ZFHX2Q9C0A1 2572 aaPredicted RBP7.02□□□□□ -1.29
SIX4-202ENST00000554079 TRBV6-5A0A0K0K1A5 114 aa7.02□□□□□ -1.29
SIX4-202ENST00000554079 RBMY1BA6NDE4 496 aaKnown RBP7.02□□□□□ -1.29
SIX4-202ENST00000554079 RBMY1EA6NEQ0 496 aaKnown RBP7.02□□□□□ -1.29
SIX4-202ENST00000554079 KNCNA6PVL3 124 aa7.02□□□□□ -1.29
SIX4-202ENST00000554079 IGF1P05019 195 aa7.02□□□□□ -1.29
SIX4-202ENST00000554079 RBMY1DP0C7P1 496 aaKnown RBP7.02□□□□□ -1.29
SIX4-202ENST00000554079 RBMY1A1P0DJD3 496 aaKnown RBP7.02□□□□□ -1.29
SIX4-202ENST00000554079 RBMY1CP0DJD4 496 aa7.02□□□□□ -1.29
SIX4-202ENST00000554079 IGHV1-8P0DP01 117 aa7.02□□□□□ -1.29
SIX4-202ENST00000554079 RNASE3P12724 160 aaKnown RBP7.02□□□□□ -1.29
SIX4-202ENST00000554079 RNASE4P34096 147 aaKnown RBP7.02□□□□□ -1.29
SIX4-202ENST00000554079 RBMY1FQ15415 496 aaKnown RBP7.02□□□□□ -1.29
SIX4-202ENST00000554079 BRK1Q8WUW1 75 aa7.02□□□□□ -1.29
SIX4-202ENST00000554079 OBSCN-AS1Q96MR7 158 aa7.02□□□□□ -1.29
SIX4-202ENST00000554079 CACNA1EQ15878 2313 aa7.02□□□□□ -1.29
SIX4-202ENST00000554079 IGHV3OR16-8A0A075B7F1 116 aa7.01□□□□□ -1.29
SIX4-202ENST00000554079 NBR2O15453 112 aa7.01□□□□□ -1.29
SIX4-202ENST00000554079 IGHV3-23P01764 117 aa7.01□□□□□ -1.29
SIX4-202ENST00000554079 CTSGP08311 255 aa7.01□□□□□ -1.29
SIX4-202ENST00000554079 S100A4P26447 101 aaKnown RBP7.01□□□□□ -1.29
SIX4-202ENST00000554079 RPL28P46779 137 aaKnown RBP7.01□□□□□ -1.29
SIX4-202ENST00000554079 HILS1P60008 231 aa7.01□□□□□ -1.29
SIX4-202ENST00000554079 MRPS36P82909 103 aaKnown RBP7.01□□□□□ -1.29
SIX4-202ENST00000554079 CIRBPQ14011 172 aaKnown RBP7.01□□□□□ -1.29
SIX4-202ENST00000554079 PLA2G2CQ5R387 149 aa7.01□□□□□ -1.29
SIX4-202ENST00000554079 C9orf129Q5T035 196 aaKnown RBP7.01□□□□□ -1.29
SIX4-202ENST00000554079 SDK1Q7Z5N4 2213 aa7.01□□□□□ -1.29
SIX4-202ENST00000554079 TRBV12-3P01733 135 aa7.01□□□□□ -1.29
SIX4-202ENST00000554079 VMO1Q7Z5L0 202 aa7.01□□□□□ -1.29
SIX4-202ENST00000554079 ZFAND2AQ8N6M9 145 aa7.01□□□□□ -1.29
SIX4-202ENST00000554079 NUP37Q8NFH4 326 aa7.01□□□□□ -1.29
SIX4-202ENST00000554079 VSIG2Q96IQ7 327 aa7.01□□□□□ -1.29
SIX4-202ENST00000554079 C20orf173Q96LM9 149 aa7.01□□□□□ -1.29
SIX4-202ENST00000554079 LENEPQ9Y5L5 61 aa7.01□□□□□ -1.29
SIX4-202ENST00000554079 CACNA1GO43497 2377 aa7.01□□□□□ -1.29
SIX4-202ENST00000554079 CLPSL1A2RUU4 121 aa7□□□□□ -1.29
SIX4-202ENST00000554079 IGLV1-47P01700 117 aa7□□□□□ -1.29
SIX4-202ENST00000554079 CNEP1R1Q8N9A8 125 aa7□□□□□ -1.29
SIX4-202ENST00000554079 ZZEF1O43149 2961 aa7□□□□□ -1.29
SIX4-202ENST00000554079 TRAV21A0A0B4J279 112 aa7□□□□□ -1.29
SIX4-202ENST00000554079 A8MZ25 164 aa7□□□□□ -1.29
SIX4-202ENST00000554079 FAM19A1Q7Z5A9 133 aa7□□□□□ -1.29
SIX4-202ENST00000554079 C20orf203Q8NBC4 194 aa7□□□□□ -1.29
SIX4-202ENST00000554079 FAM104AQ969W3 186 aa7□□□□□ -1.29
SIX4-202ENST00000554079 RNF5Q99942 180 aa7□□□□□ -1.29
SIX4-202ENST00000554079 C14orf132Q9NPU4 83 aa7□□□□□ -1.29
SIX4-202ENST00000554079 LINC00474Q9P2X8 69 aa7□□□□□ -1.29
SIX4-202ENST00000554079 LINC00308Q8TCZ7 52 aa6.99□□□□□ -1.29
SIX4-202ENST00000554079 LYPD2Q6UXB3 125 aa6.98□□□□□ -1.29
SIX4-202ENST00000554079 IL17DQ8TAD2 202 aa6.98□□□□□ -1.29
SIX4-202ENST00000554079 Q9HAA7 133 aa6.98□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms