RNA–Protein interactions for RNA: ENST00000553947.1

AL049839.2-201, humanhuman

APPRIS P1 TSL 2 BASIC

Gene AL049839.2, Length 3,067 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AL049839.2-201ENST00000553947 LINC01620Q4KN68 170 aa6.81□□□□□ -1.32
AL049839.2-201ENST00000553947 TMEM101Q96IK0 257 aa6.81□□□□□ -1.32
AL049839.2-201ENST00000553947 MAPK1IP1LQ8NDC0 245 aa6.8□□□□□ -1.32
AL049839.2-201ENST00000553947 DUX3Q96PT4 197 aa6.8□□□□□ -1.32
AL049839.2-201ENST00000553947 SLC50A1Q9BRV3 221 aa6.8□□□□□ -1.32
AL049839.2-201ENST00000553947 C11orf21Q9P2W6 132 aa6.8□□□□□ -1.32
AL049839.2-201ENST00000553947 LGALS9O00182 355 aa6.8□□□□□ -1.32
AL049839.2-201ENST00000553947 GPHB5Q86YW7 130 aa6.8□□□□□ -1.32
AL049839.2-201ENST00000553947 C20orf173Q96LM9 149 aa6.8□□□□□ -1.32
AL049839.2-201ENST00000553947 ZNF256Q9Y2P7 627 aaPredicted RBP6.8□□□□□ -1.32
AL049839.2-201ENST00000553947 ZNF462Q96JM2 2506 aa6.79□□□□□ -1.32
AL049839.2-201ENST00000553947 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP6.79□□□□□ -1.323e-13■■■□□ 16.2
AL049839.2-201ENST00000553947 B4DSR2 109 aa6.79□□□□□ -1.32
AL049839.2-201ENST00000553947 DEFB1P60022 68 aa6.79□□□□□ -1.32
AL049839.2-201ENST00000553947 CSPG4Q6UVK1 2322 aa6.79□□□□□ -1.32
AL049839.2-201ENST00000553947 TRAV12-1A0A0B4J245 112 aa6.79□□□□□ -1.32
AL049839.2-201ENST00000553947 IGKV3D-20A0A0C4DH25 116 aa6.79□□□□□ -1.32
AL049839.2-201ENST00000553947 A0A0J9YY99 117 aa6.79□□□□□ -1.32
AL049839.2-201ENST00000553947 RBAKDNA6NC62 111 aa6.79□□□□□ -1.32
AL049839.2-201ENST00000553947 LINC01546A6NGU7 62 aa6.79□□□□□ -1.32
AL049839.2-201ENST00000553947 C3orf22Q8N5N4 141 aa6.79□□□□□ -1.32
AL049839.2-201ENST00000553947 POLQO75417 2590 aa6.79□□□□□ -1.32
AL049839.2-201ENST00000553947 RPL13AP40429 203 aaKnown RBP6.78□□□□□ -1.32
AL049839.2-201ENST00000553947 TMEM170BQ5T4T1 132 aa6.78□□□□□ -1.32
AL049839.2-201ENST00000553947 ZANQ9Y493 2812 aa6.78□□□□□ -1.32
AL049839.2-201ENST00000553947 IGLV2-18A0A075B6J9 118 aa6.78□□□□□ -1.32
AL049839.2-201ENST00000553947 A0A096LNT2 108 aa6.78□□□□□ -1.32
AL049839.2-201ENST00000553947 EDN2P20800 178 aa6.78□□□□□ -1.32
AL049839.2-201ENST00000553947 SPANXN1Q5VSR9 72 aa6.78□□□□□ -1.32
AL049839.2-201ENST00000553947 GAGE2AQ6NT46 116 aa6.78□□□□□ -1.32
AL049839.2-201ENST00000553947 LRRC75A-AS1Q8N1F1 130 aa6.78□□□□□ -1.32
AL049839.2-201ENST00000553947 C16orf92Q96LL3 132 aa6.78□□□□□ -1.32
AL049839.2-201ENST00000553947 IGHV4-59P01825 116 aa6.78□□□□□ -1.32
AL049839.2-201ENST00000553947 PRR9Q5T870 116 aa6.78□□□□□ -1.32
AL049839.2-201ENST00000553947 C10orf99Q6UWK7 81 aa6.78□□□□□ -1.32
AL049839.2-201ENST00000553947 TRBV10-2A0A0K0K1G8 114 aa6.77□□□□□ -1.33
AL049839.2-201ENST00000553947 NDUFA4O00483 81 aa6.77□□□□□ -1.33
AL049839.2-201ENST00000553947 IGLV1-40P01703 118 aa6.77□□□□□ -1.33
AL049839.2-201ENST00000553947 IGHV3-30P01768 117 aa6.77□□□□□ -1.33
AL049839.2-201ENST00000553947 IGHV3-30-5P0DP03 117 aa6.77□□□□□ -1.33
AL049839.2-201ENST00000553947 SRSF2Q01130 221 aaKnown RBP6.77□□□□□ -1.33
AL049839.2-201ENST00000553947 DEFB112Q30KQ8 113 aa6.77□□□□□ -1.33
AL049839.2-201ENST00000553947 CEMP1Q6PRD7 247 aaPredicted RBP6.77□□□□□ -1.33
AL049839.2-201ENST00000553947 C9orf47Q6ZRZ4 202 aa6.77□□□□□ -1.33
AL049839.2-201ENST00000553947 UQCRQO14949 82 aa6.77□□□□□ -1.33
AL049839.2-201ENST00000553947 KRTAP10-9P60411 292 aa6.77□□□□□ -1.33
AL049839.2-201ENST00000553947 CFHR3Q02985 330 aa6.77□□□□□ -1.33
AL049839.2-201ENST00000553947 FAM208BQ5VWN6 2430 aa6.77□□□□□ -1.33
AL049839.2-201ENST00000553947 NEXN-AS1Q8NBZ9 246 aa6.77□□□□□ -1.33
AL049839.2-201ENST00000553947 DEFB104AQ8WTQ1 72 aa6.77□□□□□ -1.33
AL049839.2-201ENST00000553947 USP9YO00507 2555 aaPredicted RBP6.76□□□□□ -1.33
AL049839.2-201ENST00000553947 IGKV3-7A0A075B6H7 116 aa6.76□□□□□ -1.33
AL049839.2-201ENST00000553947 F5H768 121 aa6.76□□□□□ -1.33
AL049839.2-201ENST00000553947 IGHV3-33P01772 117 aa6.76□□□□□ -1.33
AL049839.2-201ENST00000553947 ORMDL2Q53FV1 153 aa6.76□□□□□ -1.33
AL049839.2-201ENST00000553947 MRPL53Q96EL3 112 aaKnown RBP6.76□□□□□ -1.33
AL049839.2-201ENST00000553947 USMG5Q96IX5 58 aa6.76□□□□□ -1.33
AL049839.2-201ENST00000553947 CENPEQ02224 2701 aa6.76□□□□□ -1.33
AL049839.2-201ENST00000553947 H3BUA1 57 aa6.76□□□□□ -1.33
AL049839.2-201ENST00000553947 M0R2P5 195 aa6.76□□□□□ -1.33
AL049839.2-201ENST00000553947 SOCS3O14543 225 aa6.76□□□□□ -1.33
AL049839.2-201ENST00000553947 ELANEP08246 267 aa6.76□□□□□ -1.33
AL049839.2-201ENST00000553947 C2orf66Q6UXQ4 117 aa6.76□□□□□ -1.33
AL049839.2-201ENST00000553947 BAALCQ8WXS3 180 aa6.76□□□□□ -1.33
AL049839.2-201ENST00000553947 CNFNQ9BYD5 112 aa6.76□□□□□ -1.33
AL049839.2-201ENST00000553947 ANKRD17O75179 2603 aaKnown RBP6.75□□□□□ -1.33
AL049839.2-201ENST00000553947 ZNF22P17026 224 aaPredicted RBP6.75□□□□□ -1.33
AL049839.2-201ENST00000553947 LGALS3P17931 250 aaKnown RBP6.75□□□□□ -1.33
AL049839.2-201ENST00000553947 DSCR9P59020 149 aa6.75□□□□□ -1.33
AL049839.2-201ENST00000553947 LINC01356Q8N9X3 169 aa6.75□□□□□ -1.33
AL049839.2-201ENST00000553947 SMIM2Q9BVW6 85 aa6.75□□□□□ -1.33
AL049839.2-201ENST00000553947 IGHV7-4-1A0A0J9YVY3 117 aa6.75□□□□□ -1.33
AL049839.2-201ENST00000553947 F6UB75 175 aa6.75□□□□□ -1.33
AL049839.2-201ENST00000553947 COX6B1P14854 86 aa6.75□□□□□ -1.33
AL049839.2-201ENST00000553947 C9orf139Q6ZV77 190 aa6.75□□□□□ -1.33
AL049839.2-201ENST00000553947 ZNF843Q8N446 348 aa6.75□□□□□ -1.33
AL049839.2-201ENST00000553947 SLC25A29Q8N8R3 303 aa6.75□□□□□ -1.33
AL049839.2-201ENST00000553947 LRRK2Q5S007 2527 aa6.75□□□□□ -1.33
AL049839.2-201ENST00000553947 UBR5O95071 2799 aaPredicted RBP6.75□□□□□ -1.33
AL049839.2-201ENST00000553947 WIPF1O43516 503 aa6.75□□□□□ -1.33
AL049839.2-201ENST00000553947 RPL11P62913 178 aaKnown RBP6.75□□□□□ -1.33
AL049839.2-201ENST00000553947 NRACQ8N912 160 aa6.75□□□□□ -1.33
AL049839.2-201ENST00000553947 C11orf86A6NJI1 115 aa6.74□□□□□ -1.33
AL049839.2-201ENST00000553947 RNF223E7ERA6 249 aa6.74□□□□□ -1.33
AL049839.2-201ENST00000553947 SPRY2O43597 315 aa6.74□□□□□ -1.33
AL049839.2-201ENST00000553947 PRSS2P07478 247 aa6.74□□□□□ -1.33
AL049839.2-201ENST00000553947 RHPN1-AS1Q9BWJ2 59 aa6.74□□□□□ -1.33
AL049839.2-201ENST00000553947 TOMM6Q96B49 74 aa6.74□□□□□ -1.33
AL049839.2-201ENST00000553947 TRBV7-7A0A0K0K1E9 115 aa6.73□□□□□ -1.33
AL049839.2-201ENST00000553947 COX6CP09669 75 aa6.73□□□□□ -1.33
AL049839.2-201ENST00000553947 LINC00526Q96FQ7 95 aa6.73□□□□□ -1.33
AL049839.2-201ENST00000553947 ZNF469Q96JG9 3925 aaPredicted RBP6.73□□□□□ -1.33
AL049839.2-201ENST00000553947 IGHV3-64A0A075B6Q5 118 aa6.73□□□□□ -1.33
AL049839.2-201ENST00000553947 P0DMU3 169 aa6.73□□□□□ -1.33
AL049839.2-201ENST00000553947 FAM231AP0DMU4 169 aa6.73□□□□□ -1.33
AL049839.2-201ENST00000553947 FAM231CP0DMU5 169 aa6.73□□□□□ -1.33
AL049839.2-201ENST00000553947 MUSTN1Q8IVN3 82 aa6.73□□□□□ -1.33
AL049839.2-201ENST00000553947 ZFAND2AQ8N6M9 145 aa6.73□□□□□ -1.33
AL049839.2-201ENST00000553947 C14orf178Q8N769 122 aaPredicted RBP6.73□□□□□ -1.33
AL049839.2-201ENST00000553947 A0A1B0GX51 115 aa6.73□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 106.4 ms