RNA–Protein interactions for RNA: ENST00000553889.5

PRKCH-209, Transcript of protein kinase C eta, humanhuman

TSL 4

Gene PRKCH, Length 553 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-209ENST00000553889 MYMXA0A1B0GTQ4 84 aa6.74□□□□□ -1.33
PRKCH-209ENST00000553889 KNCNA6PVL3 124 aa6.74□□□□□ -1.33
PRKCH-209ENST00000553889 J3QKU1 62 aa6.74□□□□□ -1.33
PRKCH-209ENST00000553889 P0DMU3 169 aa6.74□□□□□ -1.33
PRKCH-209ENST00000553889 FAM231AP0DMU4 169 aa6.74□□□□□ -1.33
PRKCH-209ENST00000553889 FAM231CP0DMU5 169 aa6.74□□□□□ -1.33
PRKCH-209ENST00000553889 PLA2G2AP14555 144 aa6.74□□□□□ -1.33
PRKCH-209ENST00000553889 VAMP3Q15836 100 aa6.74□□□□□ -1.33
PRKCH-209ENST00000553889 ZNF56Q15929 161 aa6.74□□□□□ -1.33
PRKCH-209ENST00000553889 Q6ZVH6 145 aa6.74□□□□□ -1.33
PRKCH-209ENST00000553889 CEND1Q8N111 149 aa6.74□□□□□ -1.33
PRKCH-209ENST00000553889 IL17DQ8TAD2 202 aa6.74□□□□□ -1.33
PRKCH-209ENST00000553889 ESM1Q9NQ30 184 aa6.74□□□□□ -1.33
PRKCH-209ENST00000553889 TSSC4Q9Y5U2 329 aaPredicted RBP6.74□□□□□ -1.33
PRKCH-209ENST00000553889 TLN2Q9Y4G6 2542 aa6.74□□□□□ -1.33
PRKCH-209ENST00000553889 CRYBG3Q68DQ2 2970 aa6.73□□□□□ -1.33
PRKCH-209ENST00000553889 CELSR1Q9NYQ6 3014 aa6.73□□□□□ -1.33
PRKCH-209ENST00000553889 CCL24O00175 119 aa6.73□□□□□ -1.33
PRKCH-209ENST00000553889 RS1O15537 224 aa6.73□□□□□ -1.33
PRKCH-209ENST00000553889 INSP01308 110 aa6.73□□□□□ -1.33
PRKCH-209ENST00000553889 IGKV3-20P01619 116 aa6.73□□□□□ -1.33
PRKCH-209ENST00000553889 IGHV3-53P01767 116 aa6.73□□□□□ -1.33
PRKCH-209ENST00000553889 SMIM13P0DJ93 91 aa6.73□□□□□ -1.33
PRKCH-209ENST00000553889 HERVK_113P61574 105 aa6.73□□□□□ -1.33
PRKCH-209ENST00000553889 ODF3L2Q3SX64 289 aa6.73□□□□□ -1.33
PRKCH-209ENST00000553889 CD300EQ496F6 205 aaPredicted RBP6.73□□□□□ -1.33
PRKCH-209ENST00000553889 AMMECR1LQ6DCA0 310 aa6.73□□□□□ -1.33
PRKCH-209ENST00000553889 MAPKAPK5-AS1Q8N8E1 139 aa6.73□□□□□ -1.33
PRKCH-209ENST00000553889 SELENOKQ9Y6D0 94 aa6.73□□□□□ -1.33
PRKCH-209ENST00000553889 FXYD2P54710 66 aa6.72□□□□□ -1.33
PRKCH-209ENST00000553889 CFAP126Q5VTH2 177 aa6.72□□□□□ -1.33
PRKCH-209ENST00000553889 GTF2H5Q6ZYL4 71 aa6.72□□□□□ -1.33
PRKCH-209ENST00000553889 OR4C5Q8NGB2 326 aa6.72□□□□□ -1.33
PRKCH-209ENST00000553889 OR5A1Q8NGJ0 315 aa6.72□□□□□ -1.33
PRKCH-209ENST00000553889 LINC01006Q8NI28 216 aa6.72□□□□□ -1.33
PRKCH-209ENST00000553889 AMELXQ99217 191 aa6.72□□□□□ -1.33
PRKCH-209ENST00000553889 PRADC1Q9BSG0 188 aa6.72□□□□□ -1.33
PRKCH-209ENST00000553889 SPANXB1Q9NS25 103 aaPredicted RBP6.72□□□□□ -1.33
PRKCH-209ENST00000553889 VPS13CQ709C8 3753 aa6.71□□□□□ -1.34
PRKCH-209ENST00000553889 A0A1W2PPM0 123 aa6.71□□□□□ -1.34
PRKCH-209ENST00000553889 K7EP34 96 aa6.71□□□□□ -1.34
PRKCH-209ENST00000553889 CIDEAO60543 219 aa6.71□□□□□ -1.34
PRKCH-209ENST00000553889 FOSL1P15407 271 aa6.71□□□□□ -1.34
PRKCH-209ENST00000553889 HILS1P60008 231 aa6.71□□□□□ -1.34
PRKCH-209ENST00000553889 RPL39P62891 51 aaKnown RBP6.71□□□□□ -1.34
PRKCH-209ENST00000553889 FAM74A4Q5TZK3 123 aa6.71□□□□□ -1.34
PRKCH-209ENST00000553889 NEGR1Q7Z3B1 354 aa6.71□□□□□ -1.34
PRKCH-209ENST00000553889 DUX3Q96PT4 197 aa6.71□□□□□ -1.34
PRKCH-209ENST00000553889 TIMM21Q9BVV7 248 aa6.71□□□□□ -1.34
PRKCH-209ENST00000553889 TTTY13Q9BZ97 58 aa6.71□□□□□ -1.34
PRKCH-209ENST00000553889 SPANXA1Q9NS26 97 aa6.71□□□□□ -1.34
PRKCH-209ENST00000553889 CCDC168Q8NDH2 2452 aa6.71□□□□□ -1.34
PRKCH-209ENST00000553889 KMT2BQ9UMN6 2715 aaPredicted RBP6.7□□□□□ -1.34
PRKCH-209ENST00000553889 GAGE10A6NGK3 116 aa6.7□□□□□ -1.34
PRKCH-209ENST00000553889 ZNF418Q8TF45 676 aaPredicted RBP6.7□□□□□ -1.34
PRKCH-209ENST00000553889 SONP18583 2426 aaKnown RBP6.7□□□□□ -1.34
PRKCH-209ENST00000553889 FLNAP21333 2647 aaKnown RBP6.69□□□□□ -1.34
PRKCH-209ENST00000553889 IGLV4-3A0A075B6K6 122 aa6.69□□□□□ -1.34
PRKCH-209ENST00000553889 TRBV10-1A0A0K0K1A3 114 aa6.69□□□□□ -1.34
PRKCH-209ENST00000553889 IGLV1-51P01701 117 aa6.69□□□□□ -1.34
PRKCH-209ENST00000553889 CD28P10747 220 aa6.69□□□□□ -1.34
PRKCH-209ENST00000553889 GCSHP23434 173 aa6.69□□□□□ -1.34
PRKCH-209ENST00000553889 MRPS36P82909 103 aaKnown RBP6.69□□□□□ -1.34
PRKCH-209ENST00000553889 C1orf158Q8N1D5 194 aa6.69□□□□□ -1.34
PRKCH-209ENST00000553889 ZNRF2Q8NHG8 242 aa6.69□□□□□ -1.34
PRKCH-209ENST00000553889 FAM104AQ969W3 186 aa6.69□□□□□ -1.34
PRKCH-209ENST00000553889 LINC01587Q99440 93 aa6.69□□□□□ -1.34
PRKCH-209ENST00000553889 NACAE9PAV3 2078 aa6.69□□□□□ -1.34
PRKCH-209ENST00000553889 CHD6Q8TD26 2715 aa6.68□□□□□ -1.34
PRKCH-209ENST00000553889 TMEM223A0PJW6 202 aa6.68□□□□□ -1.34
PRKCH-209ENST00000553889 ADARB2-AS1A8MUL3 147 aa6.68□□□□□ -1.34
PRKCH-209ENST00000553889 H3BUT2 72 aa6.68□□□□□ -1.34
PRKCH-209ENST00000553889 LEPROTO15243 131 aa6.68□□□□□ -1.34
PRKCH-209ENST00000553889 FABP2P12104 132 aa6.68□□□□□ -1.34
PRKCH-209ENST00000553889 PROK1P58294 105 aa6.68□□□□□ -1.34
PRKCH-209ENST00000553889 DAZ2Q13117 558 aaKnown RBP6.68□□□□□ -1.34
PRKCH-209ENST00000553889 C12orf74Q32Q52 190 aa6.68□□□□□ -1.34
PRKCH-209ENST00000553889 KHDC1LQ5JSQ8 128 aa6.68□□□□□ -1.34
PRKCH-209ENST00000553889 SAMD5Q5TGI4 173 aa6.68□□□□□ -1.34
PRKCH-209ENST00000553889 STHQ8IWL8 128 aa6.68□□□□□ -1.34
PRKCH-209ENST00000553889 SLC25A29Q8N8R3 303 aa6.68□□□□□ -1.34
PRKCH-209ENST00000553889 RNASE8Q8TDE3 154 aaKnown RBP6.68□□□□□ -1.34
PRKCH-209ENST00000553889 PLEKHB2Q96CS7 222 aa6.68□□□□□ -1.34
PRKCH-209ENST00000553889 HIST1H4GQ99525 98 aa6.68□□□□□ -1.34
PRKCH-209ENST00000553889 CITED2Q99967 270 aaPredicted RBP6.68□□□□□ -1.34
PRKCH-209ENST00000553889 YAE1D1Q9NRH1 226 aa6.68□□□□□ -1.34
PRKCH-209ENST00000553889 TNFRSF18Q9Y5U5 241 aa6.68□□□□□ -1.34
PRKCH-209ENST00000553889 PDZD2O15018 2839 aa6.68□□□□□ -1.34
PRKCH-209ENST00000553889 A0A0J9YY99 117 aa6.67□□□□□ -1.34
PRKCH-209ENST00000553889 TMEM238LA0A1B0GVL6 79 aa6.67□□□□□ -1.34
PRKCH-209ENST00000553889 GAGE12BA1L429 117 aa6.67□□□□□ -1.34
PRKCH-209ENST00000553889 A6NJY4 79 aa6.67□□□□□ -1.34
PRKCH-209ENST00000553889 ZNF815PA8K554 130 aa6.67□□□□□ -1.34
PRKCH-209ENST00000553889 IGLL5B9A064 214 aa6.67□□□□□ -1.34
PRKCH-209ENST00000553889 UBE2D1P51668 147 aa6.67□□□□□ -1.34
PRKCH-209ENST00000553889 TCTAP57738 103 aa6.67□□□□□ -1.34
PRKCH-209ENST00000553889 FAM19A3Q7Z5A8 133 aa6.67□□□□□ -1.34
PRKCH-209ENST00000553889 TMEM263Q8WUH6 116 aaKnown RBP6.67□□□□□ -1.34
PRKCH-209ENST00000553889 CHCHD7Q9BUK0 85 aa6.67□□□□□ -1.34
PRKCH-209ENST00000553889 VCX2Q9H322 139 aa6.67□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms