RNA–Protein interactions for RNA: ENST00000553846.1

PRKCH-208, Transcript of protein kinase C eta, humanhuman

TSL 4

Gene PRKCH, Length 557 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-208ENST00000553846 HSPB11Q9Y547 144 aa5.53□□□□□ -1.52
PRKCH-208ENST00000553846 TRAV34A0A0B4J273 112 aa5.52□□□□□ -1.53
PRKCH-208ENST00000553846 TRBV6-1A0A0K0K1D8 114 aa5.52□□□□□ -1.53
PRKCH-208ENST00000553846 GRIFINA4D1Z8 144 aa5.52□□□□□ -1.53
PRKCH-208ENST00000553846 H7C1H1 209 aa5.52□□□□□ -1.53
PRKCH-208ENST00000553846 M0R381 172 aa5.52□□□□□ -1.53
PRKCH-208ENST00000553846 SH2D1AO60880 128 aa5.52□□□□□ -1.53
PRKCH-208ENST00000553846 GZMBP10144 247 aa5.52□□□□□ -1.53
PRKCH-208ENST00000553846 GCHFRP30047 84 aa5.52□□□□□ -1.53
PRKCH-208ENST00000553846 RPS10P46783 165 aaKnown RBP5.52□□□□□ -1.53
PRKCH-208ENST00000553846 Q6ZRP5 223 aa5.52□□□□□ -1.53
PRKCH-208ENST00000553846 ZFP82Q8N141 532 aa5.52□□□□□ -1.53
PRKCH-208ENST00000553846 ENKURQ8TC29 256 aa5.52□□□□□ -1.53
PRKCH-208ENST00000553846 CCDC32Q9BV29 185 aa5.52□□□□□ -1.53
PRKCH-208ENST00000553846 SMIM3Q9BZL3 60 aa5.52□□□□□ -1.53
PRKCH-208ENST00000553846 FSIP2Q5CZC0 6907 aa5.51□□□□□ -1.53
PRKCH-208ENST00000553846 GVQW2A0A096LPI5 108 aaPredicted RBP5.51□□□□□ -1.53
PRKCH-208ENST00000553846 A0A1B0GUV1 79 aa5.51□□□□□ -1.53
PRKCH-208ENST00000553846 K7EQM0 130 aa5.51□□□□□ -1.53
PRKCH-208ENST00000553846 M0R036 132 aa5.51□□□□□ -1.53
PRKCH-208ENST00000553846 SUMO1P63165 101 aaKnown RBP5.51□□□□□ -1.53
PRKCH-208ENST00000553846 TMEM97Q5BJF2 176 aa5.51□□□□□ -1.53
PRKCH-208ENST00000553846 PSORS1C2Q9UIG4 136 aa5.51□□□□□ -1.53
PRKCH-208ENST00000553846 PHLDA3Q9Y5J5 127 aa5.51□□□□□ -1.53
PRKCH-208ENST00000553846 TRBV25-1A0A075B6N4 114 aa5.5□□□□□ -1.53
PRKCH-208ENST00000553846 A0A1W2PPV4 95 aa5.5□□□□□ -1.53
PRKCH-208ENST00000553846 FAM231BA6NCW3 169 aa5.5□□□□□ -1.53
PRKCH-208ENST00000553846 ZNF674Q2M3X9 581 aa5.5□□□□□ -1.53
PRKCH-208ENST00000553846 ZNF664Q8N3J9 261 aa5.5□□□□□ -1.53
PRKCH-208ENST00000553846 PRR26Q8N8Z3 221 aa5.5□□□□□ -1.53
PRKCH-208ENST00000553846 SCGB1C1Q8TD33 95 aa5.5□□□□□ -1.53
PRKCH-208ENST00000553846 RAB24Q969Q5 203 aa5.5□□□□□ -1.53
PRKCH-208ENST00000553846 DERL1Q9BUN8 251 aa5.5□□□□□ -1.53
PRKCH-208ENST00000553846 TPT1P13693 172 aaKnown RBP5.49□□□□□ -1.53
PRKCH-208ENST00000553846 CDC34P49427 236 aaPredicted RBP5.49□□□□□ -1.53
PRKCH-208ENST00000553846 H2BFSP57053 126 aa5.49□□□□□ -1.53
PRKCH-208ENST00000553846 ZNF56Q15929 161 aa5.49□□□□□ -1.53
PRKCH-208ENST00000553846 HIGD2BQ4VC39 106 aa5.49□□□□□ -1.53
PRKCH-208ENST00000553846 OR10AG1Q8NH19 301 aa5.49□□□□□ -1.53
PRKCH-208ENST00000553846 PPP1R1CQ8WVI7 109 aa5.49□□□□□ -1.53
PRKCH-208ENST00000553846 IGHV1-24A0A0C4DH33 117 aa5.48□□□□□ -1.53
PRKCH-208ENST00000553846 A0A1W2PRE2 83 aa5.48□□□□□ -1.53
PRKCH-208ENST00000553846 INMT-MINDY4F8WBC2 141 aa5.48□□□□□ -1.53
PRKCH-208ENST00000553846 PEX7O00628 323 aa5.48□□□□□ -1.53
PRKCH-208ENST00000553846 SSNA1O43805 119 aa5.48□□□□□ -1.53
PRKCH-208ENST00000553846 KRTAP1-4P0C5Y4 121 aa5.48□□□□□ -1.53
PRKCH-208ENST00000553846 RAB5CP51148 216 aa5.48□□□□□ -1.53
PRKCH-208ENST00000553846 CYCSP99999 105 aaKnown RBP5.48□□□□□ -1.53
PRKCH-208ENST00000553846 FAM162BQ5T6X4 162 aa5.48□□□□□ -1.53
PRKCH-208ENST00000553846 SSBP4Q9BWG4 385 aaPredicted RBP5.48□□□□□ -1.53
PRKCH-208ENST00000553846 ZNF471Q9BX82 626 aaPredicted RBP5.48□□□□□ -1.53
PRKCH-208ENST00000553846 NDUFA13Q9P0J0 144 aa5.48□□□□□ -1.53
PRKCH-208ENST00000553846 TMSB15BA0A087X1C1 80 aa5.47□□□□□ -1.53
PRKCH-208ENST00000553846 GAGE12HA6NDE8 117 aa5.47□□□□□ -1.53
PRKCH-208ENST00000553846 SNAI2O43623 268 aa5.47□□□□□ -1.53
PRKCH-208ENST00000553846 MPC2O95563 127 aa5.47□□□□□ -1.53
PRKCH-208ENST00000553846 PET100P0DJ07 73 aa5.47□□□□□ -1.53
PRKCH-208ENST00000553846 RPL12P30050 165 aaKnown RBP5.47□□□□□ -1.53
PRKCH-208ENST00000553846 S100ZQ8WXG8 99 aa5.47□□□□□ -1.53
PRKCH-208ENST00000553846 AQP10Q96PS8 301 aa5.47□□□□□ -1.53
PRKCH-208ENST00000553846 LINC00474Q9P2X8 69 aa5.47□□□□□ -1.53
PRKCH-208ENST00000553846 CRCT1Q9UGL9 99 aa5.47□□□□□ -1.53
PRKCH-208ENST00000553846 M0QY20 66 aa5.46□□□□□ -1.54
PRKCH-208ENST00000553846 UPK1BO75841 260 aa5.46□□□□□ -1.54
PRKCH-208ENST00000553846 IFNA7P01567 189 aa5.46□□□□□ -1.54
PRKCH-208ENST00000553846 CXCL1P09341 107 aa5.46□□□□□ -1.54
PRKCH-208ENST00000553846 MED28Q9H204 178 aa5.46□□□□□ -1.54
PRKCH-208ENST00000553846 TMEM167BQ9NRX6 74 aa5.46□□□□□ -1.54
PRKCH-208ENST00000553846 ZFP30Q9Y2G7 519 aa5.46□□□□□ -1.54
PRKCH-208ENST00000553846 TRAV26-2A0A0B4J265 109 aa5.45□□□□□ -1.54
PRKCH-208ENST00000553846 A0A1W2PNN7 141 aa5.45□□□□□ -1.54
PRKCH-208ENST00000553846 CXorf1O96002 111 aa5.45□□□□□ -1.54
PRKCH-208ENST00000553846 LTAP01374 205 aa5.45□□□□□ -1.54
PRKCH-208ENST00000553846 OR5AL1P0C617 328 aa5.45□□□□□ -1.54
PRKCH-208ENST00000553846 CACNG7P62955 275 aa5.45□□□□□ -1.54
PRKCH-208ENST00000553846 FOXI1Q12951 378 aa5.45□□□□□ -1.54
PRKCH-208ENST00000553846 ZNF726P1Q15940 193 aa5.45□□□□□ -1.54
PRKCH-208ENST00000553846 CFAP161Q6P656 301 aa5.45□□□□□ -1.54
PRKCH-208ENST00000553846 TMEM243Q9BU79 118 aa5.45□□□□□ -1.54
PRKCH-208ENST00000553846 FAM74A7A6NL05 159 aa5.44□□□□□ -1.54
PRKCH-208ENST00000553846 PTTG1IPP53801 180 aa5.44□□□□□ -1.54
PRKCH-208ENST00000553846 IFITM3Q01628 133 aa5.44□□□□□ -1.54
PRKCH-208ENST00000553846 PRR4Q16378 134 aa5.44□□□□□ -1.54
PRKCH-208ENST00000553846 SREK1IP1Q8N9Q2 155 aaPredicted RBP5.44□□□□□ -1.54
PRKCH-208ENST00000553846 HIST1H2BAQ96A08 127 aa5.44□□□□□ -1.54
PRKCH-208ENST00000553846 PGLYRP4Q96LB8 373 aa5.44□□□□□ -1.54
PRKCH-208ENST00000553846 PSMG3Q9BT73 122 aaPredicted RBP5.44□□□□□ -1.54
PRKCH-208ENST00000553846 IGLV1-50A0A075B6I6 118 aa5.43□□□□□ -1.54
PRKCH-208ENST00000553846 ATP6V0CP27449 155 aa5.43□□□□□ -1.54
PRKCH-208ENST00000553846 KRTAP11-1Q8IUC1 163 aa5.43□□□□□ -1.54
PRKCH-208ENST00000553846 CHCHD10Q8WYQ3 142 aaPredicted RBP5.43□□□□□ -1.54
PRKCH-208ENST00000553846 MUC21A0A140T8X8 626 aa5.42□□□□□ -1.54
PRKCH-208ENST00000553846 H0Y9J4 135 aa5.42□□□□□ -1.54
PRKCH-208ENST00000553846 DEFA1P59665 94 aa5.42□□□□□ -1.54
PRKCH-208ENST00000553846 DEFA3P59666 94 aa5.42□□□□□ -1.54
PRKCH-208ENST00000553846 SUMO4Q6EEV6 95 aa5.42□□□□□ -1.54
PRKCH-208ENST00000553846 LINC00299Q6ZSB3 139 aa5.42□□□□□ -1.54
PRKCH-208ENST00000553846 LINC00526Q96FQ7 95 aa5.42□□□□□ -1.54
PRKCH-208ENST00000553846 FMC1Q96HJ9 113 aa5.42□□□□□ -1.54
PRKCH-208ENST00000553846 CARD19Q96LW7 228 aa5.42□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 87.1 ms