RNA–Protein interactions for RNA: ENST00000553683.1

VRK1-202, Transcript of vaccinia related kinase 1, humanhuman

TSL 3

Gene VRK1, Length 247 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-202ENST00000553683 FXYD6-FXYD2A0A087WZ82 144 aa1.21□□□□□ -2.22
VRK1-202ENST00000553683 TRBV6-7A0A0A0MS04 114 aa1.21□□□□□ -2.22
VRK1-202ENST00000553683 IGHV1-45A0A0A0MS14 117 aa1.21□□□□□ -2.22
VRK1-202ENST00000553683 IGKV1-12A0A0C4DH73 117 aa1.21□□□□□ -2.22
VRK1-202ENST00000553683 A0A1W2PQD3 144 aa1.21□□□□□ -2.22
VRK1-202ENST00000553683 KANTRA0A1W2PQU2 76 aa1.21□□□□□ -2.22
VRK1-202ENST00000553683 C19orf84I3L1E1 186 aa1.21□□□□□ -2.22
VRK1-202ENST00000553683 ATOX1O00244 68 aa1.21□□□□□ -2.22
VRK1-202ENST00000553683 CCL16O15467 120 aa1.21□□□□□ -2.22
VRK1-202ENST00000553683 COX7A2P2O60397 106 aa1.21□□□□□ -2.22
VRK1-202ENST00000553683 IGKV1D-12P01611 117 aa1.21□□□□□ -2.22
VRK1-202ENST00000553683 IGHV1-46P01743 117 aa1.21□□□□□ -2.22
VRK1-202ENST00000553683 PRM2P04554 102 aa1.21□□□□□ -2.22
VRK1-202ENST00000553683 CCKP06307 115 aa1.21□□□□□ -2.22
VRK1-202ENST00000553683 ASAH2BP0C7U1 165 aa1.21□□□□□ -2.22
VRK1-202ENST00000553683 C3orf79P0CE67 100 aa1.21□□□□□ -2.22
VRK1-202ENST00000553683 SMIM13P0DJ93 91 aa1.21□□□□□ -2.22
VRK1-202ENST00000553683 FAUP35544 74 aaKnown RBP1.21□□□□□ -2.22
VRK1-202ENST00000553683 EFNA4P52798 201 aa1.21□□□□□ -2.22
VRK1-202ENST00000553683 UBE2BP63146 152 aa1.21□□□□□ -2.22
VRK1-202ENST00000553683 ZNF678Q5SXM1 525 aa1.21□□□□□ -2.22
VRK1-202ENST00000553683 LYPD5Q6UWN5 251 aa1.21□□□□□ -2.22
VRK1-202ENST00000553683 PATE2Q6UY27 113 aa1.21□□□□□ -2.22
VRK1-202ENST00000553683 SDIM1Q6ZPB5 146 aa1.21□□□□□ -2.22
VRK1-202ENST00000553683 C7orf65Q6ZTY9 151 aa1.21□□□□□ -2.22
VRK1-202ENST00000553683 OR5AS1Q8N127 324 aa1.21□□□□□ -2.22
VRK1-202ENST00000553683 SERP2Q8N6R1 65 aa1.21□□□□□ -2.22
VRK1-202ENST00000553683 SIGLECL1Q8N7X8 197 aa1.21□□□□□ -2.22
VRK1-202ENST00000553683 CLDND2Q8NHS1 167 aa1.21□□□□□ -2.22
VRK1-202ENST00000553683 FAM213BQ8TBF2 198 aa1.21□□□□□ -2.22
VRK1-202ENST00000553683 AQP3Q92482 292 aa1.21□□□□□ -2.22
VRK1-202ENST00000553683 FXYD6Q9H0Q3 95 aa1.21□□□□□ -2.22
VRK1-202ENST00000553683 LINC00474Q9P2X8 69 aa1.21□□□□□ -2.22
VRK1-202ENST00000553683 EPDR1Q9UM22 224 aa1.21□□□□□ -2.22
VRK1-202ENST00000553683 LY96Q9Y6Y9 160 aa1.21□□□□□ -2.22
VRK1-202ENST00000553683 ECM29Q5VYK3 1845 aa1.21□□□□□ -2.22
VRK1-202ENST00000553683 ARFGEF1Q9Y6D6 1849 aa1.21□□□□□ -2.22
VRK1-202ENST00000553683 TGP01266 2768 aa1.21□□□□□ -2.22
VRK1-202ENST00000553683 ADAMTSL1Q8N6G6 1762 aa1.21□□□□□ -2.22
VRK1-202ENST00000553683 LAMA1P25391 3075 aa1.21□□□□□ -2.22
VRK1-202ENST00000553683 ARHGEF5Q12774 1597 aa1.21□□□□□ -2.22
VRK1-202ENST00000553683 COL5A3P25940 1745 aaPredicted RBP1.2□□□□□ -2.22
VRK1-202ENST00000553683 TIAM2Q8IVF5 1701 aa1.2□□□□□ -2.22
VRK1-202ENST00000553683 ARAP2Q8WZ64 1704 aa1.2□□□□□ -2.22
VRK1-202ENST00000553683 SPENQ96T58 3664 aaKnown RBP1.2□□□□□ -2.22
VRK1-202ENST00000553683 KIF13BQ9NQT8 1826 aa1.2□□□□□ -2.22
VRK1-202ENST00000553683 COL1A1P02452 1464 aaPredicted RBP1.2□□□□□ -2.22
VRK1-202ENST00000553683 PXDNQ92626 1479 aa1.2□□□□□ -2.22
VRK1-202ENST00000553683 LAMC1P11047 1609 aa1.2□□□□□ -2.22
VRK1-202ENST00000553683 CLTCL1P53675 1640 aa1.2□□□□□ -2.22
VRK1-202ENST00000553683 PHRF1Q9P1Y6 1649 aaKnown RBP1.2□□□□□ -2.22
VRK1-202ENST00000553683 UBE2L5PA0A1B0GUS4 154 aa1.2□□□□□ -2.22
VRK1-202ENST00000553683 TIMM17BO60830 172 aa1.2□□□□□ -2.22
VRK1-202ENST00000553683 SCGB1C2P0DMR2 95 aa1.2□□□□□ -2.22
VRK1-202ENST00000553683 COX8AP10176 69 aa1.2□□□□□ -2.22
VRK1-202ENST00000553683 CCL5P13501 91 aa1.2□□□□□ -2.22
VRK1-202ENST00000553683 SLC25A16P16260 332 aa1.2□□□□□ -2.22
VRK1-202ENST00000553683 DSCR4P56555 118 aaPredicted RBP1.2□□□□□ -2.22
VRK1-202ENST00000553683 UBE2G1P62253 170 aa1.2□□□□□ -2.22
VRK1-202ENST00000553683 BLCAPP62952 87 aa1.2□□□□□ -2.22
VRK1-202ENST00000553683 UBE2L3P68036 154 aaKnown RBP1.2□□□□□ -2.22
VRK1-202ENST00000553683 RPL18Q07020 188 aaKnown RBP1.2□□□□□ -2.22
VRK1-202ENST00000553683 INSL4Q14641 139 aa1.2□□□□□ -2.22
VRK1-202ENST00000553683 KISS1Q15726 138 aa1.2□□□□□ -2.22
VRK1-202ENST00000553683 Q1T7F1 81 aa1.2□□□□□ -2.22
VRK1-202ENST00000553683 DEFB121Q5J5C9 76 aa1.2□□□□□ -2.22
VRK1-202ENST00000553683 ATP11AUNQ6ZP68 121 aa1.2□□□□□ -2.22
VRK1-202ENST00000553683 SCXQ7RTU7 201 aa1.2□□□□□ -2.22
VRK1-202ENST00000553683 CCL4L1Q8NHW4 92 aa1.2□□□□□ -2.22
VRK1-202ENST00000553683 TSKUQ8WUA8 353 aa1.2□□□□□ -2.22
VRK1-202ENST00000553683 B9D2Q9BPU9 175 aa1.2□□□□□ -2.22
VRK1-202ENST00000553683 NABP2Q9BQ15 211 aa1.2□□□□□ -2.22
VRK1-202ENST00000553683 MANBALQ9NQG1 85 aa1.2□□□□□ -2.22
VRK1-202ENST00000553683 IL36BQ9NZH7 164 aa1.2□□□□□ -2.22
VRK1-202ENST00000553683 MYH2Q9UKX2 1941 aa1.2□□□□□ -2.22
VRK1-202ENST00000553683 EP300Q09472 2414 aaPredicted RBP1.2□□□□□ -2.22
VRK1-202ENST00000553683 CDC42BPGQ6DT37 1551 aa1.2□□□□□ -2.22
VRK1-202ENST00000553683 ITSN1Q15811 1721 aa1.2□□□□□ -2.22
VRK1-202ENST00000553683 NRAPQ86VF7 1730 aa1.2□□□□□ -2.22
VRK1-202ENST00000553683 UBR1Q8IWV7 1749 aa1.2□□□□□ -2.22
VRK1-202ENST00000553683 MGAQ8IWI9 3026 aa1.2□□□□□ -2.22
VRK1-202ENST00000553683 ATMQ13315 3056 aa1.19□□□□□ -2.22
VRK1-202ENST00000553683 ITPR2Q14571 2701 aa1.19□□□□□ -2.22
VRK1-202ENST00000553683 LTN1O94822 1766 aa1.19□□□□□ -2.22
VRK1-202ENST00000553683 DENND4CQ5VZ89 1909 aa1.19□□□□□ -2.22
VRK1-202ENST00000553683 IGHV3OR15-7A0A075B7D8 119 aa1.19□□□□□ -2.22
VRK1-202ENST00000553683 TRAV16A0A0A6YYK6 109 aaPredicted RBP1.19□□□□□ -2.22
VRK1-202ENST00000553683 TRAV2A0A0B4J234 112 aa1.19□□□□□ -2.22
VRK1-202ENST00000553683 A0A0D9SFI3 127 aa1.19□□□□□ -2.22
VRK1-202ENST00000553683 A0A1B0GW54 56 aa1.19□□□□□ -2.22
VRK1-202ENST00000553683 C2orf70A6NJV1 201 aa1.19□□□□□ -2.22
VRK1-202ENST00000553683 ZNF736B4DX44 427 aaPredicted RBP1.19□□□□□ -2.22
VRK1-202ENST00000553683 F2Z2F3 143 aa1.19□□□□□ -2.22
VRK1-202ENST00000553683 C3orf84H3BNL1 204 aa1.19□□□□□ -2.22
VRK1-202ENST00000553683 H7BZZ5 65 aa1.19□□□□□ -2.22
VRK1-202ENST00000553683 CXCL8P10145 99 aa1.19□□□□□ -2.22
VRK1-202ENST00000553683 CD28P10747 220 aa1.19□□□□□ -2.22
VRK1-202ENST00000553683 PTHLHP12272 177 aa1.19□□□□□ -2.22
VRK1-202ENST00000553683 ATP5EP56381 51 aaPredicted RBP1.19□□□□□ -2.22
VRK1-202ENST00000553683 KRTDAPP60985 99 aa1.19□□□□□ -2.22
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms