RNA–Protein interactions for RNA: ENST00000553599.5

PSEN1-207, Transcript of presenilin 1, humanhuman

TSL 4

Gene PSEN1, Length 591 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-207ENST00000553599 TMEM136Q6ZRR5 245 aa13.45□□□□□ -0.26
PSEN1-207ENST00000553599 NEGR1Q7Z3B1 354 aa13.45□□□□□ -0.26
PSEN1-207ENST00000553599 CBLN2Q8IUK8 224 aa13.45□□□□□ -0.26
PSEN1-207ENST00000553599 NEXN-AS1Q8NBZ9 246 aa13.45□□□□□ -0.26
PSEN1-207ENST00000553599 YPEL4Q96NS1 127 aa13.45□□□□□ -0.26
PSEN1-207ENST00000553599 DYNC2H1Q8NCM8 4307 aaKnown RBP13.45□□□□□ -0.26
PSEN1-207ENST00000553599 TGIF2-C20orf24A0A0A6YYL0 155 aa13.44□□□□□ -0.26
PSEN1-207ENST00000553599 LOC100131303A0A0U1RQF7 123 aa13.44□□□□□ -0.26
PSEN1-207ENST00000553599 LINC00694P0DN24 101 aa13.44□□□□□ -0.26
PSEN1-207ENST00000553599 MRPL51Q4U2R6 128 aaKnown RBP13.44□□□□□ -0.26
PSEN1-207ENST00000553599 TNFRSF18Q9Y5U5 241 aa13.44□□□□□ -0.26
PSEN1-207ENST00000553599 TRAV26-2A0A0B4J265 109 aa13.43□□□□□ -0.26
PSEN1-207ENST00000553599 GAGE12JA6NER3 117 aa13.43□□□□□ -0.26
PSEN1-207ENST00000553599 P0DMU3 169 aa13.43□□□□□ -0.26
PSEN1-207ENST00000553599 FAM231AP0DMU4 169 aa13.43□□□□□ -0.26
PSEN1-207ENST00000553599 FAM231CP0DMU5 169 aa13.43□□□□□ -0.26
PSEN1-207ENST00000553599 GAGE1Q13065 139 aa13.43□□□□□ -0.26
PSEN1-207ENST00000553599 GAGE4Q13068 117 aa13.43□□□□□ -0.26
PSEN1-207ENST00000553599 GAGE5Q13069 117 aa13.43□□□□□ -0.26
PSEN1-207ENST00000553599 GAGE13Q4V321 117 aa13.43□□□□□ -0.26
PSEN1-207ENST00000553599 SREK1IP1Q8N9Q2 155 aaPredicted RBP13.43□□□□□ -0.26
PSEN1-207ENST00000553599 ZNRF2Q8NHG8 242 aa13.43□□□□□ -0.26
PSEN1-207ENST00000553599 STARD9Q9P2P6 4700 aa13.42□□□□□ -0.26
PSEN1-207ENST00000553599 CKS2P33552 79 aa13.42□□□□□ -0.26
PSEN1-207ENST00000553599 TIRAPP58753 221 aa13.42□□□□□ -0.26
PSEN1-207ENST00000553599 UBE2D3P61077 147 aa13.42□□□□□ -0.26
PSEN1-207ENST00000553599 UBE2D2P62837 147 aa13.42□□□□□ -0.26
PSEN1-207ENST00000553599 TRBV6-5A0A0K0K1A5 114 aa13.41□□□□□ -0.26
PSEN1-207ENST00000553599 OR10J3Q5JRS4 329 aa13.41□□□□□ -0.26
PSEN1-207ENST00000553599 ATP6V0E2Q8NHE4 81 aa13.41□□□□□ -0.26
PSEN1-207ENST00000553599 Q9UF83 564 aa13.41□□□□□ -0.26
PSEN1-207ENST00000553599 TENM2Q9NT68 2774 aa13.4□□□□□ -0.26
PSEN1-207ENST00000553599 PHOX2AO14813 284 aa13.4□□□□□ -0.26
PSEN1-207ENST00000553599 CCL18P55774 89 aa13.4□□□□□ -0.26
PSEN1-207ENST00000553599 DAZ4Q86SG3 579 aaKnown RBP13.4□□□□□ -0.26
PSEN1-207ENST00000553599 ORMDL3Q8N138 153 aa13.4□□□□□ -0.26
PSEN1-207ENST00000553599 DAZ3Q9NR90 486 aaKnown RBP13.4□□□□□ -0.26
PSEN1-207ENST00000553599 LAMTOR2Q9Y2Q5 125 aa13.4□□□□□ -0.26
PSEN1-207ENST00000553599 D6R8Y8 96 aa13.39□□□□□ -0.27
PSEN1-207ENST00000553599 APCSP02743 223 aa13.39□□□□□ -0.27
PSEN1-207ENST00000553599 GTSF1LQ9H1H1 148 aa13.39□□□□□ -0.27
PSEN1-207ENST00000553599 TMEM97Q5BJF2 176 aa13.38□□□□□ -0.27
PSEN1-207ENST00000553599 NRACQ8N912 160 aa13.38□□□□□ -0.27
PSEN1-207ENST00000553599 RPL39LQ96EH5 51 aaKnown RBP13.38□□□□□ -0.27
PSEN1-207ENST00000553599 C20orf78Q9BR46 151 aa13.38□□□□□ -0.27
PSEN1-207ENST00000553599 ST20Q9HBF5 79 aa13.38□□□□□ -0.27
PSEN1-207ENST00000553599 NCR2O95944 276 aa13.37□□□□□ -0.27
PSEN1-207ENST00000553599 LYPD5Q6UWN5 251 aa13.37□□□□□ -0.27
PSEN1-207ENST00000553599 SMKR1H3BMG3 65 aa13.36□□□□□ -0.27
PSEN1-207ENST00000553599 RPS10P46783 165 aaKnown RBP13.36□□□□□ -0.27
PSEN1-207ENST00000553599 ESRGQ1W209 222 aa13.36□□□□□ -0.27
PSEN1-207ENST00000553599 LGALS9CQ6DKI2 356 aa13.36□□□□□ -0.27
PSEN1-207ENST00000553599 PRELID3AQ96N28 172 aa13.36□□□□□ -0.27
PSEN1-207ENST00000553599 MRPL18Q9H0U6 180 aaKnown RBP13.36□□□□□ -0.27
PSEN1-207ENST00000553599 TRAPPC1Q9Y5R8 145 aa13.36□□□□□ -0.27
PSEN1-207ENST00000553599 SDHAF1A6NFY7 115 aa13.35□□□□□ -0.27
PSEN1-207ENST00000553599 SCO1O75880 301 aa13.35□□□□□ -0.27
PSEN1-207ENST00000553599 GAS8-AS1O95177 125 aa13.35□□□□□ -0.27
PSEN1-207ENST00000553599 TNFRSF6BO95407 300 aa13.35□□□□□ -0.27
PSEN1-207ENST00000553599 SUMO2P61956 95 aaKnown RBP13.35□□□□□ -0.27
PSEN1-207ENST00000553599 RPL32P62910 135 aaKnown RBP13.35□□□□□ -0.27
PSEN1-207ENST00000553599 COLCA2A8K830 154 aa13.34□□□□□ -0.27
PSEN1-207ENST00000553599 POLR2KP53803 58 aaKnown RBP13.34□□□□□ -0.27
PSEN1-207ENST00000553599 FABP9Q0Z7S8 132 aa13.34□□□□□ -0.27
PSEN1-207ENST00000553599 MRPS16Q9Y3D3 137 aaKnown RBP13.34□□□□□ -0.27
PSEN1-207ENST00000553599 PLECQ15149 4684 aaKnown RBP13.34□□□□□ -0.27
PSEN1-207ENST00000553599 TRBV27A0A0K0K1C4 114 aa13.33□□□□□ -0.28
PSEN1-207ENST00000553599 UBE2DNLQ8IWF7 75 aa13.33□□□□□ -0.28
PSEN1-207ENST00000553599 TMEM70Q9BUB7 260 aa13.33□□□□□ -0.28
PSEN1-207ENST00000553599 PRSS47A8MTI9 375 aa13.32□□□□□ -0.28
PSEN1-207ENST00000553599 I3L3M4 83 aa13.32□□□□□ -0.28
PSEN1-207ENST00000553599 VCYO14598 125 aa13.32□□□□□ -0.28
PSEN1-207ENST00000553599 NPYP01303 97 aa13.32□□□□□ -0.28
PSEN1-207ENST00000553599 LELP1Q5T871 98 aa13.32□□□□□ -0.28
PSEN1-207ENST00000553599 UPK3BQ9BT76 320 aa13.32□□□□□ -0.28
PSEN1-207ENST00000553599 LINC00588Q9Y4M8 146 aa13.32□□□□□ -0.28
PSEN1-207ENST00000553599 TCAPO15273 167 aa13.31□□□□□ -0.28
PSEN1-207ENST00000553599 RAB5AP20339 215 aa13.31□□□□□ -0.28
PSEN1-207ENST00000553599 COTL1Q14019 142 aa13.31□□□□□ -0.28
PSEN1-207ENST00000553599 TRAV8-6A0A0B4J262 113 aa13.3□□□□□ -0.28
PSEN1-207ENST00000553599 IGHV3-38A0A0C4DH36 116 aa13.3□□□□□ -0.28
PSEN1-207ENST00000553599 PMCHP20382 165 aa13.3□□□□□ -0.28
PSEN1-207ENST00000553599 KIAA1644Q3SXP7 199 aa13.3□□□□□ -0.28
PSEN1-207ENST00000553599 LINC00476Q8WZB0 136 aa13.3□□□□□ -0.28
PSEN1-207ENST00000553599 ALKBH7Q9BT30 221 aaPredicted RBP13.3□□□□□ -0.28
PSEN1-207ENST00000553599 MAP1LC3AQ9H492 121 aa13.3□□□□□ -0.28
PSEN1-207ENST00000553599 TRBV6-8A0A0A6YYG3 113 aa13.29□□□□□ -0.28
PSEN1-207ENST00000553599 SMIM2Q9BVW6 85 aa13.29□□□□□ -0.28
PSEN1-207ENST00000553599 IQCJQ1A5X6 159 aa13.28□□□□□ -0.28
PSEN1-207ENST00000553599 KIR2DL4Q99706 377 aa13.28□□□□□ -0.28
PSEN1-207ENST00000553599 TRBV25-1A0A075B6N4 114 aa13.27□□□□□ -0.29
PSEN1-207ENST00000553599 IGHV1-24A0A0C4DH33 117 aa13.27□□□□□ -0.29
PSEN1-207ENST00000553599 PKIAP61925 76 aa13.27□□□□□ -0.29
PSEN1-207ENST00000553599 NTM-AS1Q6ZSK4 140 aa13.26□□□□□ -0.29
PSEN1-207ENST00000553599 NXT2Q9NPJ8 142 aaKnown RBP13.26□□□□□ -0.29
PSEN1-207ENST00000553599 K7EMI3 77 aa13.25□□□□□ -0.29
PSEN1-207ENST00000553599 LY6G6CO95867 125 aa13.25□□□□□ -0.29
PSEN1-207ENST00000553599 SIVA1O15304 175 aa13.24□□□□□ -0.29
PSEN1-207ENST00000553599 TSHBP01222 138 aa13.24□□□□□ -0.29
PSEN1-207ENST00000553599 FCER1GP30273 86 aa13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 211.8 ms