RNA–Protein interactions for RNA: ENST00000553186.5

RBFOX1-215, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 1 (best) BASIC

Gene RBFOX1, Length 2,196 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-215ENST00000553186 APOC4P55056 127 aa14.02□□□□□ -0.16
RBFOX1-215ENST00000553186 Q6ZSN1 163 aa14.02□□□□□ -0.16
RBFOX1-215ENST00000553186 TMEM70Q9BUB7 260 aa14.02□□□□□ -0.16
RBFOX1-215ENST00000553186 HSPB8Q9UJY1 196 aa14.02□□□□□ -0.16
RBFOX1-215ENST00000553186 X6R8D5 127 aa14.02□□□□□ -0.16
RBFOX1-215ENST00000553186 RHODO00212 210 aa14.02□□□□□ -0.17
RBFOX1-215ENST00000553186 BTF3P20290 206 aaKnown RBP14.02□□□□□ -0.17
RBFOX1-215ENST00000553186 FCER1GP30273 86 aa14.02□□□□□ -0.17
RBFOX1-215ENST00000553186 LAGE3Q14657 143 aa14.02□□□□□ -0.17
RBFOX1-215ENST00000553186 NACAE9PAV3 2078 aa14.02□□□□□ -0.17
RBFOX1-215ENST00000553186 C2orf88Q9BSF0 95 aa14.01□□□□□ -0.17
RBFOX1-215ENST00000553186 NBEAL2Q6ZNJ1 2754 aa14.01□□□□□ -0.17
RBFOX1-215ENST00000553186 ZFP2Q6ZN57 461 aa14□□□□□ -0.17
RBFOX1-215ENST00000553186 ANK2Q01484 3957 aa14□□□□□ -0.17
RBFOX1-215ENST00000553186 SDHAF1A6NFY7 115 aa14□□□□□ -0.17
RBFOX1-215ENST00000553186 NEGR1Q7Z3B1 354 aa14□□□□□ -0.17
RBFOX1-215ENST00000553186 SYS1-DBNDD2H3BUS1 97 aa13.99□□□□□ -0.17
RBFOX1-215ENST00000553186 K7EMI3 77 aa13.99□□□□□ -0.17
RBFOX1-215ENST00000553186 SPATA12Q7Z6I5 190 aa13.99□□□□□ -0.17
RBFOX1-215ENST00000553186 TRBV27A0A0K0K1C4 114 aa13.99□□□□□ -0.17
RBFOX1-215ENST00000553186 H7C1H1 209 aa13.99□□□□□ -0.17
RBFOX1-215ENST00000553186 IGHV3-53P01767 116 aa13.99□□□□□ -0.17
RBFOX1-215ENST00000553186 DEFB135Q30KP9 77 aa13.99□□□□□ -0.17
RBFOX1-215ENST00000553186 SMIM9A6NGZ8 99 aa13.98□□□□□ -0.17
RBFOX1-215ENST00000553186 P0DMU3 169 aa13.98□□□□□ -0.17
RBFOX1-215ENST00000553186 FAM231AP0DMU4 169 aa13.98□□□□□ -0.17
RBFOX1-215ENST00000553186 FAM231CP0DMU5 169 aa13.98□□□□□ -0.17
RBFOX1-215ENST00000553186 OR4C5Q8NGB2 326 aa13.98□□□□□ -0.17
RBFOX1-215ENST00000553186 ZNF479Q96JC4 524 aa13.98□□□□□ -0.17
RBFOX1-215ENST00000553186 Q9UF83 564 aa13.98□□□□□ -0.17
RBFOX1-215ENST00000553186 G3V4G9 280 aa13.98□□□□□ -0.17
RBFOX1-215ENST00000553186 VCYO14598 125 aa13.98□□□□□ -0.17
RBFOX1-215ENST00000553186 LBHQ53QV2 105 aaPredicted RBP13.98□□□□□ -0.17
RBFOX1-215ENST00000553186 MAP1LC3CQ9BXW4 147 aa13.98□□□□□ -0.17
RBFOX1-215ENST00000553186 TRAV4A0A0B4J268 109 aa13.97□□□□□ -0.17
RBFOX1-215ENST00000553186 ORMDL2Q53FV1 153 aa13.97□□□□□ -0.17
RBFOX1-215ENST00000553186 MDFIQ99750 246 aa13.96□□□□□ -0.17
RBFOX1-215ENST00000553186 GAGE12BA1L429 117 aa13.96□□□□□ -0.18
RBFOX1-215ENST00000553186 EREGO14944 169 aa13.96□□□□□ -0.18
RBFOX1-215ENST00000553186 GAGE7O76087 117 aa13.96□□□□□ -0.18
RBFOX1-215ENST00000553186 GAGE12FP0CL80 117 aa13.96□□□□□ -0.18
RBFOX1-215ENST00000553186 GAGE12GP0CL81 117 aa13.96□□□□□ -0.18
RBFOX1-215ENST00000553186 GAGE12IP0CL82 117 aa13.96□□□□□ -0.18
RBFOX1-215ENST00000553186 TEX43Q6ZNM6 134 aa13.96□□□□□ -0.18
RBFOX1-215ENST00000553186 NUDT3O95989 172 aa13.95□□□□□ -0.18
RBFOX1-215ENST00000553186 EMP1P54849 157 aa13.95□□□□□ -0.18
RBFOX1-215ENST00000553186 A8MZ25 164 aa13.95□□□□□ -0.18
RBFOX1-215ENST00000553186 SAMD5Q5TGI4 173 aa13.94□□□□□ -0.18
RBFOX1-215ENST00000553186 PET117Q6UWS5 81 aa13.94□□□□□ -0.18
RBFOX1-215ENST00000553186 IFI27L1Q96BM0 104 aa13.94□□□□□ -0.18
RBFOX1-215ENST00000553186 KIR2DL4Q99706 377 aa13.94□□□□□ -0.18
RBFOX1-215ENST00000553186 NEXN-AS1Q8NBZ9 246 aa13.93□□□□□ -0.18
RBFOX1-215ENST00000553186 OR11H2Q8NH07 326 aa13.93□□□□□ -0.18
RBFOX1-215ENST00000553186 DEFB104AQ8WTQ1 72 aa13.93□□□□□ -0.18
RBFOX1-215ENST00000553186 C18orf15Q96N68 181 aa13.93□□□□□ -0.18
RBFOX1-215ENST00000553186 TRGV2A0A075B6R0 118 aa13.93□□□□□ -0.18
RBFOX1-215ENST00000553186 LINC00612Q8N6U2 182 aa13.93□□□□□ -0.18
RBFOX1-215ENST00000553186 TOMM6Q96B49 74 aa13.92□□□□□ -0.18
RBFOX1-215ENST00000553186 RNF183Q96D59 192 aa13.92□□□□□ -0.18
RBFOX1-215ENST00000553186 SNHG12Q9BXW3 62 aa13.92□□□□□ -0.18
RBFOX1-215ENST00000553186 H0Y8G0 127 aa13.91□□□□□ -0.18
RBFOX1-215ENST00000553186 LINC01545Q5VT33 79 aa13.91□□□□□ -0.18
RBFOX1-215ENST00000553186 TNFRSF18Q9Y5U5 241 aa13.91□□□□□ -0.18
RBFOX1-215ENST00000553186 I3L3M4 83 aa13.9□□□□□ -0.18
RBFOX1-215ENST00000553186 TSHBP01222 138 aa13.9□□□□□ -0.18
RBFOX1-215ENST00000553186 C2orf66Q6UXQ4 117 aa13.9□□□□□ -0.18
RBFOX1-215ENST00000553186 DNAJC30Q96LL9 226 aa13.9□□□□□ -0.18
RBFOX1-215ENST00000553186 DNAH3Q8TD57 4116 aa13.9□□□□□ -0.18
RBFOX1-215ENST00000553186 ATOH7Q8N100 152 aa13.89□□□□□ -0.19
RBFOX1-215ENST00000553186 CIDEAO60543 219 aa13.89□□□□□ -0.19
RBFOX1-215ENST00000553186 SLC25A29Q8N8R3 303 aa13.89□□□□□ -0.19
RBFOX1-215ENST00000553186 Q8NAQ8 132 aa13.89□□□□□ -0.19
RBFOX1-215ENST00000553186 IGHV4-28A0A0C4DH34 117 aa13.88□□□□□ -0.19
RBFOX1-215ENST00000553186 C20orf202A1L168 122 aa13.88□□□□□ -0.19
RBFOX1-215ENST00000553186 ATP5LO75964 103 aa13.88□□□□□ -0.19
RBFOX1-215ENST00000553186 RIPPLY3P57055 190 aa13.88□□□□□ -0.19
RBFOX1-215ENST00000553186 VAMP8Q9BV40 100 aa13.88□□□□□ -0.19
RBFOX1-215ENST00000553186 NOTCH1P46531 2555 aa13.88□□□□□ -0.19
RBFOX1-215ENST00000553186 K7EQD1 137 aa13.88□□□□□ -0.19
RBFOX1-215ENST00000553186 MIFP14174 115 aa13.88□□□□□ -0.19
RBFOX1-215ENST00000553186 TRBV10-1A0A0K0K1A3 114 aa13.87□□□□□ -0.19
RBFOX1-215ENST00000553186 DEFB130BP0DP73 79 aa13.87□□□□□ -0.19
RBFOX1-215ENST00000553186 DEFB130AP0DP74 79 aa13.87□□□□□ -0.19
RBFOX1-215ENST00000553186 RHOHQ15669 191 aa13.87□□□□□ -0.19
RBFOX1-215ENST00000553186 PMCHL2Q9BQD1 86 aa13.87□□□□□ -0.19
RBFOX1-215ENST00000553186 DEFB4AO15263 64 aa13.86□□□□□ -0.19
RBFOX1-215ENST00000553186 FAM222AQ5U5X8 452 aa13.86□□□□□ -0.19
RBFOX1-215ENST00000553186 G0S2P27469 103 aa13.86□□□□□ -0.19
RBFOX1-215ENST00000553186 FHL2Q14192 279 aa13.86□□□□□ -0.19
RBFOX1-215ENST00000553186 LGALS9CQ6DKI2 356 aa13.86□□□□□ -0.19
RBFOX1-215ENST00000553186 SCGB3A1Q96QR1 104 aa13.86□□□□□ -0.19
RBFOX1-215ENST00000553186 CYSLTR1Q9Y271 337 aa13.86□□□□□ -0.19
RBFOX1-215ENST00000553186 LYRM9A8MSI8 78 aa13.85□□□□□ -0.19
RBFOX1-215ENST00000553186 DKK2Q9UBU2 259 aa13.85□□□□□ -0.19
RBFOX1-215ENST00000553186 TP53TG1Q9Y2A0 90 aa13.85□□□□□ -0.19
RBFOX1-215ENST00000553186 PAM16Q9Y3D7 125 aa13.85□□□□□ -0.19
RBFOX1-215ENST00000553186 NBEAL1Q6ZS30 2694 aa13.85□□□□□ -0.19
RBFOX1-215ENST00000553186 TRBV7-3A0A075B6L6 115 aa13.85□□□□□ -0.19
RBFOX1-215ENST00000553186 TRBV6-4A0A1B0GX49 114 aa13.85□□□□□ -0.19
RBFOX1-215ENST00000553186 M0R143 59 aa13.85□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms