RNA–Protein interactions for RNA: ENST00000551623.1

PTCH1-223, Transcript of patched 1, humanhuman

TSL 1 (best)

Gene PTCH1, Length 366 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-223ENST00000551623 OR2G3Q8NGZ4 309 aa1.23□□□□□ -2.21
PTCH1-223ENST00000551623 TVP23CQ96ET8 276 aa1.23□□□□□ -2.21
PTCH1-223ENST00000551623 S100A16Q96FQ6 103 aaKnown RBP1.23□□□□□ -2.21
PTCH1-223ENST00000551623 DIRAS2Q96HU8 199 aa1.23□□□□□ -2.21
PTCH1-223ENST00000551623 FAM167A-AS1Q96KT0 104 aa1.23□□□□□ -2.21
PTCH1-223ENST00000551623 PFDN5Q99471 154 aa1.23□□□□□ -2.21
PTCH1-223ENST00000551623 GGACTQ9BVM4 153 aa1.23□□□□□ -2.21
PTCH1-223ENST00000551623 KRTAP2-4Q9BYR9 128 aa1.23□□□□□ -2.21
PTCH1-223ENST00000551623 TXNL4BQ9NX01 149 aaKnown RBP1.23□□□□□ -2.21
PTCH1-223ENST00000551623 IL36BQ9NZH7 164 aa1.23□□□□□ -2.21
PTCH1-223ENST00000551623 RSL24D1Q9UHA3 163 aaKnown RBP1.23□□□□□ -2.21
PTCH1-223ENST00000551623 GPR132Q9UNW8 380 aa1.23□□□□□ -2.21
PTCH1-223ENST00000551623 STRAPQ9Y3F4 350 aaKnown RBP1.23□□□□□ -2.21
PTCH1-223ENST00000551623 IGHV3-73A0A0B4J1V6 119 aa1.22□□□□□ -2.21
PTCH1-223ENST00000551623 LOC107984640A0A0U1RRK4 108 aa1.22□□□□□ -2.21
PTCH1-223ENST00000551623 PTGES3LE9PB15 166 aa1.22□□□□□ -2.21
PTCH1-223ENST00000551623 TMEM262E9PQX1 116 aa1.22□□□□□ -2.21
PTCH1-223ENST00000551623 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP1.22□□□□□ -2.21
PTCH1-223ENST00000551623 M0R2T5 61 aa1.22□□□□□ -2.21
PTCH1-223ENST00000551623 GOSR2O14653 212 aa1.22□□□□□ -2.21
PTCH1-223ENST00000551623 EIF3GO75821 320 aaKnown RBP eCLIP1.22□□□□□ -2.21
PTCH1-223ENST00000551623 APOMO95445 188 aa1.22□□□□□ -2.21
PTCH1-223ENST00000551623 CD3DP04234 171 aa1.22□□□□□ -2.21
PTCH1-223ENST00000551623 SNRPCP09234 159 aaKnown RBP1.22□□□□□ -2.21
PTCH1-223ENST00000551623 NBEAP1P0C6P0 100 aa1.22□□□□□ -2.21
PTCH1-223ENST00000551623 SDC2P34741 201 aa1.22□□□□□ -2.21
PTCH1-223ENST00000551623 RPL29P47914 159 aaKnown RBP1.22□□□□□ -2.21
PTCH1-223ENST00000551623 TAS2R30P59541 319 aa1.22□□□□□ -2.21
PTCH1-223ENST00000551623 S100A10P60903 97 aa1.22□□□□□ -2.21
PTCH1-223ENST00000551623 SNRPEP62304 92 aaKnown RBP1.22□□□□□ -2.21
PTCH1-223ENST00000551623 EIF5AP63241 154 aaKnown RBP1.22□□□□□ -2.21
PTCH1-223ENST00000551623 MEF2BQ02080 365 aaPredicted RBP1.22□□□□□ -2.21
PTCH1-223ENST00000551623 SSBP1Q04837 148 aaKnown RBP1.22□□□□□ -2.21
PTCH1-223ENST00000551623 SLC38A11Q08AI6 406 aa1.22□□□□□ -2.21
PTCH1-223ENST00000551623 SS18Q15532 418 aa1.22□□□□□ -2.21
PTCH1-223ENST00000551623 LYZL2Q7Z4W2 148 aa1.22□□□□□ -2.21
PTCH1-223ENST00000551623 LINC00337Q8N6G1 96 aa1.22□□□□□ -2.21
PTCH1-223ENST00000551623 OR1L4Q8NGR5 311 aa1.22□□□□□ -2.21
PTCH1-223ENST00000551623 OR2T35Q8NGX2 323 aa1.22□□□□□ -2.21
PTCH1-223ENST00000551623 DYNC2LI1Q8TCX1 351 aa1.22□□□□□ -2.21
PTCH1-223ENST00000551623 RAB2BQ8WUD1 216 aa1.22□□□□□ -2.21
PTCH1-223ENST00000551623 SFRP2Q96HF1 295 aa1.22□□□□□ -2.21
PTCH1-223ENST00000551623 CARD19Q96LW7 228 aa1.22□□□□□ -2.21
PTCH1-223ENST00000551623 KIR2DL4Q99706 377 aa1.22□□□□□ -2.21
PTCH1-223ENST00000551623 MGST2Q99735 147 aa1.22□□□□□ -2.21
PTCH1-223ENST00000551623 CHCHD5Q9BSY4 110 aa1.22□□□□□ -2.21
PTCH1-223ENST00000551623 SLIRPQ9GZT3 109 aaKnown RBP1.22□□□□□ -2.21
PTCH1-223ENST00000551623 NAA50Q9GZZ1 169 aaKnown RBP1.22□□□□□ -2.21
PTCH1-223ENST00000551623 SCN3BQ9NY72 215 aa1.22□□□□□ -2.21
PTCH1-223ENST00000551623 MTFP1Q9UDX5 166 aa1.22□□□□□ -2.21
PTCH1-223ENST00000551623 FLVCR2Q9UPI3 526 aa1.22□□□□□ -2.21
PTCH1-223ENST00000551623 TPRKBQ9Y3C4 175 aa1.22□□□□□ -2.21
PTCH1-223ENST00000551623 IGLV4-60A0A075B6I1 120 aa1.21□□□□□ -2.22
PTCH1-223ENST00000551623 TRBV25-1A0A075B6N4 114 aa1.21□□□□□ -2.22
PTCH1-223ENST00000551623 A0A087WZ39 114 aa1.21□□□□□ -2.22
PTCH1-223ENST00000551623 TRBV6-1A0A0K0K1D8 114 aa1.21□□□□□ -2.22
PTCH1-223ENST00000551623 SMIM30A4D0T7 59 aa1.21□□□□□ -2.22
PTCH1-223ENST00000551623 TSC22D2O75157 780 aa1.21□□□□□ -2.22
PTCH1-223ENST00000551623 ATP5HO75947 161 aa1.21□□□□□ -2.22
PTCH1-223ENST00000551623 APOA1P02647 267 aa1.21□□□□□ -2.22
PTCH1-223ENST00000551623 MT2AP02795 61 aa1.21□□□□□ -2.22
PTCH1-223ENST00000551623 TLX1NBP0CAT3 122 aa1.21□□□□□ -2.22
PTCH1-223ENST00000551623 ESDP10768 282 aa1.21□□□□□ -2.22
PTCH1-223ENST00000551623 IAPPP10997 89 aa1.21□□□□□ -2.22
PTCH1-223ENST00000551623 CAMLGP49069 296 aa1.21□□□□□ -2.22
PTCH1-223ENST00000551623 CAMPP49913 170 aa1.21□□□□□ -2.22
PTCH1-223ENST00000551623 RPS29P62273 56 aaKnown RBP1.21□□□□□ -2.22
PTCH1-223ENST00000551623 SYCNQ0VAF6 134 aa1.21□□□□□ -2.22
PTCH1-223ENST00000551623 SPANXN5Q5MJ07 72 aa1.21□□□□□ -2.22
PTCH1-223ENST00000551623 SPAG11AQ6PDA7 123 aa1.21□□□□□ -2.22
PTCH1-223ENST00000551623 CLPSL2Q6UWE3 100 aa1.21□□□□□ -2.22
PTCH1-223ENST00000551623 Q6ZRG5 221 aa1.21□□□□□ -2.22
PTCH1-223ENST00000551623 PHF5AQ7RTV0 110 aaKnown RBP1.21□□□□□ -2.22
PTCH1-223ENST00000551623 COX8CQ7Z4L0 72 aa1.21□□□□□ -2.22
PTCH1-223ENST00000551623 SAMD12Q8N8I0 201 aa1.21□□□□□ -2.22
PTCH1-223ENST00000551623 TMEM229BQ8NBD8 167 aa1.21□□□□□ -2.22
PTCH1-223ENST00000551623 NUP35Q8NFH5 326 aa1.21□□□□□ -2.22
PTCH1-223ENST00000551623 OR5C1Q8NGR4 320 aa1.21□□□□□ -2.22
PTCH1-223ENST00000551623 FXYD5Q96DB9 178 aa1.21□□□□□ -2.22
PTCH1-223ENST00000551623 PHYHIPLQ96FC7 376 aa1.21□□□□□ -2.22
PTCH1-223ENST00000551623 SMIM8Q96KF7 97 aa1.21□□□□□ -2.22
PTCH1-223ENST00000551623 PGLYRP4Q96LB8 373 aa1.21□□□□□ -2.22
PTCH1-223ENST00000551623 AQP10Q96PS8 301 aa1.21□□□□□ -2.22
PTCH1-223ENST00000551623 SLC25A2Q9BXI2 301 aa1.21□□□□□ -2.22
PTCH1-223ENST00000551623 C11orf1Q9H5F2 150 aa1.21□□□□□ -2.22
PTCH1-223ENST00000551623 JPT2Q9H910 190 aa1.21□□□□□ -2.22
PTCH1-223ENST00000551623 S100A14Q9HCY8 104 aa1.21□□□□□ -2.22
PTCH1-223ENST00000551623 LYRM2Q9NU23 88 aaPredicted RBP1.21□□□□□ -2.22
PTCH1-223ENST00000551623 OR5AC2Q9NZP5 309 aa1.21□□□□□ -2.22
PTCH1-223ENST00000551623 RABL2BQ9UNT1 228 aa1.21□□□□□ -2.22
PTCH1-223ENST00000551623 C14orf166Q9Y224 244 aaKnown RBP1.21□□□□□ -2.22
PTCH1-223ENST00000551623 WDR83OSQ9Y284 106 aa1.21□□□□□ -2.22
PTCH1-223ENST00000551623 KCNIP3Q9Y2W7 256 aa1.21□□□□□ -2.22
PTCH1-223ENST00000551623 PHLDA3Q9Y5J5 127 aa1.21□□□□□ -2.22
PTCH1-223ENST00000551623 TIMM9Q9Y5J7 89 aa1.21□□□□□ -2.22
PTCH1-223ENST00000551623 TRAV34A0A0B4J273 112 aa1.2□□□□□ -2.22
PTCH1-223ENST00000551623 IGHV1-24A0A0C4DH33 117 aa1.2□□□□□ -2.22
PTCH1-223ENST00000551623 IGHV1-58A0A0C4DH39 117 aa1.2□□□□□ -2.22
PTCH1-223ENST00000551623 SERTM2A0A1B0GWG4 89 aa1.2□□□□□ -2.22
PTCH1-223ENST00000551623 SMCO3A2RU48 225 aa1.2□□□□□ -2.22
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms