RNA–Protein interactions for RNA: ENST00000551516.1

CPSF6-207, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 2 BASIC

Gene CPSF6, Length 234 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-207ENST00000551516 H3BP45 60 aa1.39□□□□□ -2.19
CPSF6-207ENST00000551516 H7C1H1 209 aa1.39□□□□□ -2.19
CPSF6-207ENST00000551516 ATG12O94817 140 aa1.39□□□□□ -2.19
CPSF6-207ENST00000551516 NDUFB6O95139 128 aa1.39□□□□□ -2.19
CPSF6-207ENST00000551516 IFNA5P01569 189 aa1.39□□□□□ -2.19
CPSF6-207ENST00000551516 IGKV2D-40P01614 121 aaPredicted RBP1.39□□□□□ -2.19
CPSF6-207ENST00000551516 IGHV3-53P01767 116 aa1.39□□□□□ -2.19
CPSF6-207ENST00000551516 MBP02144 154 aa1.39□□□□□ -2.19
CPSF6-207ENST00000551516 AKAIN1P0CW23 69 aa1.39□□□□□ -2.19
CPSF6-207ENST00000551516 PYYP10082 97 aa1.39□□□□□ -2.19
CPSF6-207ENST00000551516 HIST1H1EP10412 219 aaKnown RBP1.39□□□□□ -2.19
CPSF6-207ENST00000551516 RAB4AP20338 218 aa1.39□□□□□ -2.19
CPSF6-207ENST00000551516 PMCHP20382 165 aa1.39□□□□□ -2.19
CPSF6-207ENST00000551516 CRIP1P50238 77 aa1.39□□□□□ -2.19
CPSF6-207ENST00000551516 CNBPP62633 177 aaKnown RBP1.39□□□□□ -2.19
CPSF6-207ENST00000551516 PRR3P79522 188 aaKnown RBP1.39□□□□□ -2.19
CPSF6-207ENST00000551516 MRPS10P82664 201 aaKnown RBP1.39□□□□□ -2.19
CPSF6-207ENST00000551516 SLAQ13239 276 aa1.39□□□□□ -2.19
CPSF6-207ENST00000551516 GUK1Q16774 197 aa1.39□□□□□ -2.19
CPSF6-207ENST00000551516 SPANXN5Q5MJ07 72 aa1.39□□□□□ -2.19
CPSF6-207ENST00000551516 DNLZQ5SXM8 178 aa1.39□□□□□ -2.19
CPSF6-207ENST00000551516 MIC13Q5XKP0 118 aa1.39□□□□□ -2.19
CPSF6-207ENST00000551516 LINC00305Q7Z4B0 112 aa1.39□□□□□ -2.19
CPSF6-207ENST00000551516 CBLN2Q8IUK8 224 aa1.39□□□□□ -2.19
CPSF6-207ENST00000551516 C10orf126Q8N4M7 172 aa1.39□□□□□ -2.19
CPSF6-207ENST00000551516 C15orf56Q8N910 161 aa1.39□□□□□ -2.19
CPSF6-207ENST00000551516 ZNF680Q8NEM1 530 aa1.39□□□□□ -2.19
CPSF6-207ENST00000551516 Q8TAT8 98 aa1.39□□□□□ -2.19
CPSF6-207ENST00000551516 SPACA4Q8TDM5 124 aa1.39□□□□□ -2.19
CPSF6-207ENST00000551516 RAB2BQ8WUD1 216 aa1.39□□□□□ -2.19
CPSF6-207ENST00000551516 C15orf40Q8WUR7 153 aa1.39□□□□□ -2.19
CPSF6-207ENST00000551516 MITD1Q8WV92 249 aa1.39□□□□□ -2.19
CPSF6-207ENST00000551516 DEDD2Q8WXF8 326 aa1.39□□□□□ -2.19
CPSF6-207ENST00000551516 FAM104AQ969W3 186 aa1.39□□□□□ -2.19
CPSF6-207ENST00000551516 ISOC2Q96AB3 205 aa1.39□□□□□ -2.19
CPSF6-207ENST00000551516 NARS2Q96I59 477 aaKnown RBP1.39□□□□□ -2.19
CPSF6-207ENST00000551516 PRRT1Q99946 306 aa1.39□□□□□ -2.19
CPSF6-207ENST00000551516 BCL7BQ9BQE9 202 aa1.39□□□□□ -2.19
CPSF6-207ENST00000551516 TMEM208Q9BTX3 173 aa1.39□□□□□ -2.19
CPSF6-207ENST00000551516 TMEM147Q9BVK8 224 aa1.39□□□□□ -2.19
CPSF6-207ENST00000551516 SAMD10Q9BYL1 202 aa1.39□□□□□ -2.19
CPSF6-207ENST00000551516 KRTAP4-1Q9BYQ7 146 aa1.39□□□□□ -2.19
CPSF6-207ENST00000551516 SRRQ9GZT4 340 aa1.39□□□□□ -2.19
CPSF6-207ENST00000551516 ARL6Q9H0F7 186 aa1.39□□□□□ -2.19
CPSF6-207ENST00000551516 GTSF1LQ9H1H1 148 aa1.39□□□□□ -2.19
CPSF6-207ENST00000551516 NPVFQ9HCQ7 196 aa1.39□□□□□ -2.19
CPSF6-207ENST00000551516 PLAC8Q9NZF1 115 aa1.39□□□□□ -2.19
CPSF6-207ENST00000551516 FLVCR2Q9UPI3 526 aa1.39□□□□□ -2.19
CPSF6-207ENST00000551516 CHTOPQ9Y3Y2 248 aaKnown RBP1.39□□□□□ -2.19
CPSF6-207ENST00000551516 LENEPQ9Y5L5 61 aa1.39□□□□□ -2.19
CPSF6-207ENST00000551516 PXMP4Q9Y6I8 212 aa1.39□□□□□ -2.19
CPSF6-207ENST00000551516 TRGV2A0A075B6R0 118 aa1.38□□□□□ -2.19
CPSF6-207ENST00000551516 A0A087WXM4 84 aa1.38□□□□□ -2.19
CPSF6-207ENST00000551516 IGHV3OR16-9A0A0B4J2B5 98 aa1.38□□□□□ -2.19
CPSF6-207ENST00000551516 A0A1W2PPV4 95 aa1.38□□□□□ -2.19
CPSF6-207ENST00000551516 CENPXA8MT69 81 aa1.38□□□□□ -2.19
CPSF6-207ENST00000551516 M0R2P5 195 aa1.38□□□□□ -2.19
CPSF6-207ENST00000551516 LECT2O14960 151 aa1.38□□□□□ -2.19
CPSF6-207ENST00000551516 MPDU1O75352 247 aa1.38□□□□□ -2.19
CPSF6-207ENST00000551516 ORM1P02763 201 aa1.38□□□□□ -2.19
CPSF6-207ENST00000551516 TYMSP04818 313 aa1.38□□□□□ -2.19
CPSF6-207ENST00000551516 IL5P05113 134 aa1.38□□□□□ -2.19
CPSF6-207ENST00000551516 FABP1P07148 127 aa1.38□□□□□ -2.19
CPSF6-207ENST00000551516 METTL15P1P0C7V9 234 aa1.38□□□□□ -2.19
CPSF6-207ENST00000551516 HTN1P15515 57 aa1.38□□□□□ -2.19
CPSF6-207ENST00000551516 AKR1C4P17516 323 aa1.38□□□□□ -2.19
CPSF6-207ENST00000551516 EVI2AP22794 236 aa1.38□□□□□ -2.19
CPSF6-207ENST00000551516 RNASE4P34096 147 aaKnown RBP1.38□□□□□ -2.19
CPSF6-207ENST00000551516 PFN2P35080 140 aa1.38□□□□□ -2.19
CPSF6-207ENST00000551516 RHOBP62745 196 aa1.38□□□□□ -2.19
CPSF6-207ENST00000551516 SCGB2B2Q4G0G5 96 aa1.38□□□□□ -2.19
CPSF6-207ENST00000551516 SMUG1Q53HV7 270 aa1.38□□□□□ -2.19
CPSF6-207ENST00000551516 KRTAP5-1Q6L8H4 278 aa1.38□□□□□ -2.19
CPSF6-207ENST00000551516 Q6ZVH6 145 aa1.38□□□□□ -2.19
CPSF6-207ENST00000551516 MIR17HGQ75NE6 70 aa1.38□□□□□ -2.19
CPSF6-207ENST00000551516 BPIFA4PQ86YQ2 179 aa1.38□□□□□ -2.19
CPSF6-207ENST00000551516 CLVS1Q8IUQ0 354 aaPredicted RBP1.38□□□□□ -2.19
CPSF6-207ENST00000551516 CIB3Q96Q77 187 aaPredicted RBP1.38□□□□□ -2.19
CPSF6-207ENST00000551516 SLC25A21Q9BQT8 299 aaPredicted RBP1.38□□□□□ -2.19
CPSF6-207ENST00000551516 PDCD10Q9BUL8 212 aa1.38□□□□□ -2.19
CPSF6-207ENST00000551516 ZNF471Q9BX82 626 aaPredicted RBP1.38□□□□□ -2.19
CPSF6-207ENST00000551516 ENY2Q9NPA8 101 aa1.38□□□□□ -2.19
CPSF6-207ENST00000551516 SLC39A9Q9NUM3 307 aa1.38□□□□□ -2.19
CPSF6-207ENST00000551516 PSENENQ9NZ42 101 aa1.38□□□□□ -2.19
CPSF6-207ENST00000551516 CRCT1Q9UGL9 99 aa1.38□□□□□ -2.19
CPSF6-207ENST00000551516 PRELID1Q9Y255 219 aa1.38□□□□□ -2.19
CPSF6-207ENST00000551516 USH2AO75445 5202 aa1.37□□□□□ -2.19
CPSF6-207ENST00000551516 IGLV4-60A0A075B6I1 120 aa1.37□□□□□ -2.19
CPSF6-207ENST00000551516 IGKV2-28A0A075B6P5 120 aa1.37□□□□□ -2.19
CPSF6-207ENST00000551516 SMIM26A0A096LP01 95 aa1.37□□□□□ -2.19
CPSF6-207ENST00000551516 TRAV8-1A0A0A6YYK1 113 aa1.37□□□□□ -2.19
CPSF6-207ENST00000551516 SMIM31A0A1B0GVY4 71 aa1.37□□□□□ -2.19
CPSF6-207ENST00000551516 TMEM223A0PJW6 202 aa1.37□□□□□ -2.19
CPSF6-207ENST00000551516 DISC1C4P0D8 188 aa1.37□□□□□ -2.19
CPSF6-207ENST00000551516 IGKV2D-28P01615 120 aa1.37□□□□□ -2.19
CPSF6-207ENST00000551516 IGHV3-30P01768 117 aa1.37□□□□□ -2.19
CPSF6-207ENST00000551516 IGHV3-33P01772 117 aa1.37□□□□□ -2.19
CPSF6-207ENST00000551516 APCSP02743 223 aa1.37□□□□□ -2.19
CPSF6-207ENST00000551516 NBEAP1P0C6P0 100 aa1.37□□□□□ -2.19
CPSF6-207ENST00000551516 STAG3L2P0CL84 134 aa1.37□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 62.6 ms