RNA–Protein interactions for RNA: ENST00000550611.1

LIMA1-206, Transcript of LIM domain and actin binding 1, humanhuman

TSL 4

Gene LIMA1, Length 543 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMA1-206ENST00000550611 TRGV1A0A0A0MS02 117 aa2.3□□□□□ -2.04
LIMA1-206ENST00000550611 KLLNB2CW77 178 aa2.3□□□□□ -2.04
LIMA1-206ENST00000550611 M0QXV9 152 aa2.3□□□□□ -2.04
LIMA1-206ENST00000550611 PPP1R2P9O14990 202 aa2.3□□□□□ -2.04
LIMA1-206ENST00000550611 OR7C2O60412 319 aa2.3□□□□□ -2.04
LIMA1-206ENST00000550611 GCGP01275 180 aa2.3□□□□□ -2.04
LIMA1-206ENST00000550611 IGHV3-53P01767 116 aa2.3□□□□□ -2.04
LIMA1-206ENST00000550611 SLC25A5P05141 298 aaKnown RBP2.3□□□□□ -2.04
LIMA1-206ENST00000550611 CRYGDP07320 174 aa2.3□□□□□ -2.04
LIMA1-206ENST00000550611 IGLC2P0DOY2 106 aa2.3□□□□□ -2.04
LIMA1-206ENST00000550611 IAPPP10997 89 aa2.3□□□□□ -2.04
LIMA1-206ENST00000550611 LEPP41159 167 aa2.3□□□□□ -2.04
LIMA1-206ENST00000550611 INPP1P49441 399 aa2.3□□□□□ -2.04
LIMA1-206ENST00000550611 HNRNPA3P51991 378 aaKnown RBP2.3□□□□□ -2.04
LIMA1-206ENST00000550611 TAS2R19P59542 299 aa2.3□□□□□ -2.04
LIMA1-206ENST00000550611 LSM3P62310 102 aaKnown RBP2.3□□□□□ -2.04
LIMA1-206ENST00000550611 SSBP1Q04837 148 aaKnown RBP2.3□□□□□ -2.04
LIMA1-206ENST00000550611 TMEM241Q24JQ0 296 aa2.3□□□□□ -2.04
LIMA1-206ENST00000550611 TMEM128Q5BJH2 165 aa2.3□□□□□ -2.04
LIMA1-206ENST00000550611 LINC01556Q5JQF7 62 aa2.3□□□□□ -2.04
LIMA1-206ENST00000550611 FAM74A1Q5RGS3 127 aa2.3□□□□□ -2.04
LIMA1-206ENST00000550611 IBA57Q5T440 356 aaKnown RBP2.3□□□□□ -2.04
LIMA1-206ENST00000550611 FAAP20Q6NZ36 180 aa2.3□□□□□ -2.04
LIMA1-206ENST00000550611 SCXQ7RTU7 201 aa2.3□□□□□ -2.04
LIMA1-206ENST00000550611 LINC01551Q86U37 167 aa2.3□□□□□ -2.04
LIMA1-206ENST00000550611 C10orf126Q8N4M7 172 aa2.3□□□□□ -2.04
LIMA1-206ENST00000550611 OR10D4PQ8NGN7 298 aa2.3□□□□□ -2.04
LIMA1-206ENST00000550611 TMEM37Q8WXS4 190 aa2.3□□□□□ -2.04
LIMA1-206ENST00000550611 MRAP2Q96G30 205 aa2.3□□□□□ -2.04
LIMA1-206ENST00000550611 SLC50A1Q9BRV3 221 aa2.3□□□□□ -2.04
LIMA1-206ENST00000550611 CHCHD5Q9BSY4 110 aa2.3□□□□□ -2.04
LIMA1-206ENST00000550611 CHAC1Q9BUX1 264 aa2.3□□□□□ -2.04
LIMA1-206ENST00000550611 SNHG12Q9BXW3 62 aa2.3□□□□□ -2.04
LIMA1-206ENST00000550611 PARLQ9H300 379 aa2.3□□□□□ -2.04
LIMA1-206ENST00000550611 TP53TG3Q9ULZ0 132 aa2.3□□□□□ -2.04
LIMA1-206ENST00000550611 TRAV5A0A0B4J249 113 aa2.29□□□□□ -2.04
LIMA1-206ENST00000550611 DUXBA0A1W2PPF3 345 aa2.29□□□□□ -2.04
LIMA1-206ENST00000550611 IGSF23A1L1A6 192 aa2.29□□□□□ -2.04
LIMA1-206ENST00000550611 C7orf71A4D174 169 aa2.29□□□□□ -2.04
LIMA1-206ENST00000550611 FNDC10F2Z333 226 aa2.29□□□□□ -2.04
LIMA1-206ENST00000550611 H3BQ15 152 aa2.29□□□□□ -2.04
LIMA1-206ENST00000550611 J3QR89 54 aa2.29□□□□□ -2.04
LIMA1-206ENST00000550611 SYNGR2O43760 224 aa2.29□□□□□ -2.04
LIMA1-206ENST00000550611 HSBP1O75506 76 aa2.29□□□□□ -2.04
LIMA1-206ENST00000550611 TSPAN13O95857 204 aa2.29□□□□□ -2.04
LIMA1-206ENST00000550611 IFNA1P01562 189 aa2.29□□□□□ -2.04
LIMA1-206ENST00000550611 IGLV2-8P01709 118 aa2.29□□□□□ -2.04
LIMA1-206ENST00000550611 IL5P05113 134 aa2.29□□□□□ -2.04
LIMA1-206ENST00000550611 NMBP08949 121 aa2.29□□□□□ -2.04
LIMA1-206ENST00000550611 SNRPCP09234 159 aaKnown RBP2.29□□□□□ -2.04
LIMA1-206ENST00000550611 LINC00869P0C866 280 aa2.29□□□□□ -2.04
LIMA1-206ENST00000550611 AKAIN1P0CW23 69 aa2.29□□□□□ -2.04
LIMA1-206ENST00000550611 CRISP2P16562 243 aa2.29□□□□□ -2.04
LIMA1-206ENST00000550611 PPT1P50897 306 aa2.29□□□□□ -2.04
LIMA1-206ENST00000550611 RIGQ13278 110 aa2.29□□□□□ -2.04
LIMA1-206ENST00000550611 PYY3Q5JQD4 70 aa2.29□□□□□ -2.04
LIMA1-206ENST00000550611 LCN15Q6UWW0 184 aa2.29□□□□□ -2.04
LIMA1-206ENST00000550611 Q6ZQT7 251 aa2.29□□□□□ -2.04
LIMA1-206ENST00000550611 TMUB2Q71RG4 321 aa2.29□□□□□ -2.04
LIMA1-206ENST00000550611 ZFAND2AQ8N6M9 145 aa2.29□□□□□ -2.04
LIMA1-206ENST00000550611 INO80EQ8NBZ0 244 aaPredicted RBP2.29□□□□□ -2.04
LIMA1-206ENST00000550611 OR51S1Q8NGJ8 323 aa2.29□□□□□ -2.04
LIMA1-206ENST00000550611 OR10G4Q8NGN3 311 aa2.29□□□□□ -2.04
LIMA1-206ENST00000550611 CIRBP-AS1Q8TBR5 109 aa2.29□□□□□ -2.04
LIMA1-206ENST00000550611 BLNKQ8WV28 456 aa2.29□□□□□ -2.04
LIMA1-206ENST00000550611 RASL10AQ92737 203 aa2.29□□□□□ -2.04
LIMA1-206ENST00000550611 BTF3L4Q96K17 158 aa2.29□□□□□ -2.04
LIMA1-206ENST00000550611 LINC00477Q96M19 166 aa2.29□□□□□ -2.04
LIMA1-206ENST00000550611 CIB3Q96Q77 187 aaPredicted RBP2.29□□□□□ -2.04
LIMA1-206ENST00000550611 ACTR3CQ9C0K3 210 aaPredicted RBP2.29□□□□□ -2.04
LIMA1-206ENST00000550611 AGPAT4-IT1Q9H0P7 198 aa2.29□□□□□ -2.04
LIMA1-206ENST00000550611 CST9LQ9H4G1 147 aa2.29□□□□□ -2.04
LIMA1-206ENST00000550611 NPVFQ9HCQ7 196 aa2.29□□□□□ -2.04
LIMA1-206ENST00000550611 MRPL16Q9NX20 251 aaKnown RBP2.29□□□□□ -2.04
LIMA1-206ENST00000550611 SPANXCQ9NY87 97 aa2.29□□□□□ -2.04
LIMA1-206ENST00000550611 RCL1Q9Y2P8 373 aaKnown RBP2.29□□□□□ -2.04
LIMA1-206ENST00000550611 PXMP4Q9Y6I8 212 aa2.29□□□□□ -2.04
LIMA1-206ENST00000550611 IGHV1OR15-1A0A075B7D0 117 aa2.28□□□□□ -2.04
LIMA1-206ENST00000550611 LOC100131303A0A0U1RQF7 123 aa2.28□□□□□ -2.04
LIMA1-206ENST00000550611 ANKRD20A5PA0PJZ0 165 aa2.28□□□□□ -2.04
LIMA1-206ENST00000550611 RNF222A6NCQ9 220 aa2.28□□□□□ -2.04
LIMA1-206ENST00000550611 COLCA2A8K830 154 aa2.28□□□□□ -2.04
LIMA1-206ENST00000550611 A8MU10 97 aa2.28□□□□□ -2.04
LIMA1-206ENST00000550611 H3BTX0 84 aa2.28□□□□□ -2.04
LIMA1-206ENST00000550611 HMGB3O15347 200 aaKnown RBP2.28□□□□□ -2.04
LIMA1-206ENST00000550611 CCL25O15444 150 aa2.28□□□□□ -2.04
LIMA1-206ENST00000550611 PSCAO43653 123 aa2.28□□□□□ -2.04
LIMA1-206ENST00000550611 ZNF253O75346 499 aa2.28□□□□□ -2.04
LIMA1-206ENST00000550611 MPDU1O75352 247 aa2.28□□□□□ -2.04
LIMA1-206ENST00000550611 ORM1P02763 201 aa2.28□□□□□ -2.04
LIMA1-206ENST00000550611 OR5G3P0C626 314 aa2.28□□□□□ -2.04
LIMA1-206ENST00000550611 SFTA3P0C7M3 94 aa2.28□□□□□ -2.04
LIMA1-206ENST00000550611 RAB5AP20339 215 aa2.28□□□□□ -2.04
LIMA1-206ENST00000550611 SRIP30626 198 aa2.28□□□□□ -2.04
LIMA1-206ENST00000550611 CAV2P51636 162 aa2.28□□□□□ -2.04
LIMA1-206ENST00000550611 NDUFA6P56556 154 aa2.28□□□□□ -2.04
LIMA1-206ENST00000550611 ERCC8Q13216 396 aa2.28□□□□□ -2.04
LIMA1-206ENST00000550611 JOSD1Q15040 202 aaPredicted RBP2.28□□□□□ -2.04
LIMA1-206ENST00000550611 IQCJQ1A5X6 159 aa2.28□□□□□ -2.04
LIMA1-206ENST00000550611 TDRG1Q3Y452 100 aa2.28□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms