RNA–Protein interactions for RNA: ENST00000550325.5

VDR-208, Transcript of vitamin D receptor, humanhuman

TSL 1 (best) BASIC

Gene VDR, Length 3,925 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VDR-208ENST00000550325 ICOSQ9Y6W8 199 aa9.11□□□□□ -0.95
VDR-208ENST00000550325 TRGV11A0A075B6L2 103 aa9.11□□□□□ -0.95
VDR-208ENST00000550325 IGHV3-73A0A0B4J1V6 119 aa9.11□□□□□ -0.95
VDR-208ENST00000550325 H7C423 109 aa9.11□□□□□ -0.95
VDR-208ENST00000550325 LEPROTO15243 131 aa9.11□□□□□ -0.95
VDR-208ENST00000550325 IGHV1-69DA0A0B4J2H0 117 aa9.1□□□□□ -0.95
VDR-208ENST00000550325 RNASE3P12724 160 aaKnown RBP9.1□□□□□ -0.95
VDR-208ENST00000550325 ZNF876PQ49A33 203 aa9.1□□□□□ -0.95
VDR-208ENST00000550325 C9orf139Q6ZV77 190 aa9.1□□□□□ -0.95
VDR-208ENST00000550325 Q8N9W7 124 aa9.1□□□□□ -0.95
VDR-208ENST00000550325 FAM110DQ8TAY7 271 aaPredicted RBP9.1□□□□□ -0.95
VDR-208ENST00000550325 RELNP78509 3460 aa9.1□□□□□ -0.95
VDR-208ENST00000550325 YAE1D1Q9NRH1 226 aa9.1□□□□□ -0.95
VDR-208ENST00000550325 NACAE9PAV3 2078 aa9.1□□□□□ -0.95
VDR-208ENST00000550325 BRI3O95415 125 aa9.1□□□□□ -0.95
VDR-208ENST00000550325 A0A0B4J2C4 111 aa9.09□□□□□ -0.95
VDR-208ENST00000550325 A0A0J9YXY3 114 aa9.09□□□□□ -0.95
VDR-208ENST00000550325 CEMP1Q6PRD7 247 aaPredicted RBP9.09□□□□□ -0.95
VDR-208ENST00000550325 UNQ9165/PRO28630Q6UXU0 137 aa9.09□□□□□ -0.95
VDR-208ENST00000550325 TIMM21Q9BVV7 248 aa9.09□□□□□ -0.95
VDR-208ENST00000550325 RS1O15537 224 aa9.09□□□□□ -0.95
VDR-208ENST00000550325 P0DMU3 169 aa9.09□□□□□ -0.95
VDR-208ENST00000550325 FAM231AP0DMU4 169 aa9.09□□□□□ -0.95
VDR-208ENST00000550325 FAM231CP0DMU5 169 aa9.09□□□□□ -0.95
VDR-208ENST00000550325 NOTCH3Q9UM47 2321 aa9.09□□□□□ -0.95
VDR-208ENST00000550325 DOPEY2Q9Y3R5 2298 aa9.08□□□□□ -0.96
VDR-208ENST00000550325 PRRC2AP48634 2157 aaKnown RBP9.08□□□□□ -0.96
VDR-208ENST00000550325 TRAV12-2A0A075B6T6 113 aa9.08□□□□□ -0.96
VDR-208ENST00000550325 M0QXV9 152 aa9.08□□□□□ -0.96
VDR-208ENST00000550325 TRBV12-3P01733 135 aa9.08□□□□□ -0.96
VDR-208ENST00000550325 CD28P10747 220 aa9.08□□□□□ -0.96
VDR-208ENST00000550325 TMEM101Q96IK0 257 aa9.08□□□□□ -0.96
VDR-208ENST00000550325 AMELXQ99217 191 aa9.08□□□□□ -0.96
VDR-208ENST00000550325 MUC4Q99102 2169 aa9.08□□□□□ -0.96
VDR-208ENST00000550325 TMEM223A0PJW6 202 aa9.08□□□□□ -0.96
VDR-208ENST00000550325 ZNF625Q96I27 306 aaPredicted RBP9.08□□□□□ -0.96
VDR-208ENST00000550325 TIMM17AQ99595 171 aa9.08□□□□□ -0.96
VDR-208ENST00000550325 UBTD1Q9HAC8 227 aa9.08□□□□□ -0.96
VDR-208ENST00000550325 DCHS2Q6V1P9 2916 aa9.08□□□□□ -0.96
VDR-208ENST00000550325 GRNP28799 593 aaKnown RBP9.08□□□□□ -0.96
VDR-208ENST00000550325 PRR30Q53SZ7 412 aaPredicted RBP9.08□□□□□ -0.96
VDR-208ENST00000550325 VPREB3Q9UKI3 123 aa9.08□□□□□ -0.96
VDR-208ENST00000550325 OOSP1A8MZH6 123 aa9.07□□□□□ -0.96
VDR-208ENST00000550325 OVOL1O14753 267 aa9.07□□□□□ -0.96
VDR-208ENST00000550325 LOC107984640A0A0U1RRK4 108 aa9.07□□□□□ -0.96
VDR-208ENST00000550325 LINC00694P0DN24 101 aa9.07□□□□□ -0.96
VDR-208ENST00000550325 IGHV3-30-3P0DP02 117 aa9.07□□□□□ -0.96
VDR-208ENST00000550325 FLNBO75369 2602 aaKnown RBP9.07□□□□□ -0.96
VDR-208ENST00000550325 POLR2KP53803 58 aaKnown RBP9.07□□□□□ -0.96
VDR-208ENST00000550325 Q6Q795 121 aa9.07□□□□□ -0.96
VDR-208ENST00000550325 NDUFA12Q9UI09 145 aa9.07□□□□□ -0.96
VDR-208ENST00000550325 KLK5Q9Y337 293 aaPredicted RBP9.07□□□□□ -0.96
VDR-208ENST00000550325 CENPEQ02224 2701 aa9.07□□□□□ -0.96
VDR-208ENST00000550325 MRPL53Q96EL3 112 aaKnown RBP9.06□□□□□ -0.96
VDR-208ENST00000550325 KLK9Q9UKQ9 250 aa9.06□□□□□ -0.96
VDR-208ENST00000550325 ZNF462Q96JM2 2506 aa9.06□□□□□ -0.96
VDR-208ENST00000550325 ADAMTSL4-AS1Q5T5F5 129 aa9.06□□□□□ -0.96
VDR-208ENST00000550325 AKAP13Q12802 2813 aa9.05□□□□□ -0.96
VDR-208ENST00000550325 TRBV30A0A0K0K1B3 111 aa9.05□□□□□ -0.96
VDR-208ENST00000550325 TNFRSF18Q9Y5U5 241 aa9.05□□□□□ -0.96
VDR-208ENST00000550325 TRBV7-1A0A0A6YYK4 115 aa9.05□□□□□ -0.96
VDR-208ENST00000550325 I3L3M4 83 aa9.05□□□□□ -0.96
VDR-208ENST00000550325 TRAV41A0A0B4J266 112 aa9.04□□□□□ -0.96
VDR-208ENST00000550325 ODF3BA8MYP8 253 aa9.04□□□□□ -0.96
VDR-208ENST00000550325 KLRB1Q12918 225 aa9.04□□□□□ -0.96
VDR-208ENST00000550325 EDA2RQ9HAV5 297 aa9.04□□□□□ -0.96
VDR-208ENST00000550325 TLN2Q9Y4G6 2542 aa9.04□□□□□ -0.96
VDR-208ENST00000550325 LY6G5BQ8NDX9 201 aa9.04□□□□□ -0.96
VDR-208ENST00000550325 MDFICQ9P1T7 246 aa9.04□□□□□ -0.96
VDR-208ENST00000550325 SAA4P35542 130 aa9.04□□□□□ -0.96
VDR-208ENST00000550325 M0R1W7 72 aa9.03□□□□□ -0.96
VDR-208ENST00000550325 PF4V1P10720 104 aa9.03□□□□□ -0.96
VDR-208ENST00000550325 C2CD3Q4AC94 2353 aa9.03□□□□□ -0.96
VDR-208ENST00000550325 LY6EQ16553 131 aa9.03□□□□□ -0.96
VDR-208ENST00000550325 LENEPQ9Y5L5 61 aa9.03□□□□□ -0.96
VDR-208ENST00000550325 ZFP36P26651 326 aaKnown RBP9.03□□□□□ -0.96
VDR-208ENST00000550325 LINC00315P59091 139 aa9.03□□□□□ -0.96
VDR-208ENST00000550325 ITLN2Q8WWU7 325 aaPredicted RBP9.02□□□□□ -0.96
VDR-208ENST00000550325 RHPN1-AS1Q9BWJ2 59 aa9.02□□□□□ -0.96
VDR-208ENST00000550325 TMEM126AQ9H061 195 aa9.02□□□□□ -0.96
VDR-208ENST00000550325 H3BT86 120 aa9.02□□□□□ -0.97
VDR-208ENST00000550325 Q8N6K4 173 aa9.02□□□□□ -0.97
VDR-208ENST00000550325 KNCNA6PVL3 124 aa9.02□□□□□ -0.97
VDR-208ENST00000550325 MINOS1Q5TGZ0 78 aa9.02□□□□□ -0.97
VDR-208ENST00000550325 ATP5J2P56134 94 aa9.01□□□□□ -0.97
VDR-208ENST00000550325 IGLV4-3A0A075B6K6 122 aa9.01□□□□□ -0.97
VDR-208ENST00000550325 UCNP55089 124 aa9.01□□□□□ -0.97
VDR-208ENST00000550325 LINC01587Q99440 93 aa9.01□□□□□ -0.97
VDR-208ENST00000550325 KIF25-AS1Q9Y6Z4 181 aa9.01□□□□□ -0.97
VDR-208ENST00000550325 HIVEP3Q5T1R4 2406 aa9.01□□□□□ -0.97
VDR-208ENST00000550325 MAP1AP78559 2803 aaPredicted RBP9.01□□□□□ -0.97
VDR-208ENST00000550325 IGHV4OR15-8A0A075B7B6 117 aa9.01□□□□□ -0.97
VDR-208ENST00000550325 A0A087WW49 117 aa9.01□□□□□ -0.97
VDR-208ENST00000550325 GAGE2AQ6NT46 116 aa9.01□□□□□ -0.97
VDR-208ENST00000550325 IGFL3Q6UXB1 125 aa9.01□□□□□ -0.97
VDR-208ENST00000550325 C20orf203Q8NBC4 194 aa9.01□□□□□ -0.97
VDR-208ENST00000550325 TRBV27A0A0K0K1C4 114 aa9□□□□□ -0.97
VDR-208ENST00000550325 USP9YO00507 2555 aaPredicted RBP9□□□□□ -0.97
VDR-208ENST00000550325 CCL21O00585 134 aa9□□□□□ -0.97
VDR-208ENST00000550325 EDN2P20800 178 aa9□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 72.2 ms