RNA–Protein interactions for RNA: ENST00000549655.5

BRF1-215, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 2

Gene BRF1, Length 1,962 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-215ENST00000549655 CFAP126Q5VTH2 177 aa13.87□□□□□ -0.19
BRF1-215ENST00000549655 CITED1Q99966 193 aa13.87□□□□□ -0.19
BRF1-215ENST00000549655 ZFP2Q6ZN57 461 aa13.86□□□□□ -0.19
BRF1-215ENST00000549655 SPATA3Q8NHX4 192 aa13.86□□□□□ -0.19
BRF1-215ENST00000549655 NACAE9PAV3 2078 aa13.86□□□□□ -0.19
BRF1-215ENST00000549655 NOTCH3Q9UM47 2321 aa13.86□□□□□ -0.19
BRF1-215ENST00000549655 H7C1H1 209 aa13.85□□□□□ -0.19
BRF1-215ENST00000549655 STPG4Q8N801 248 aa13.85□□□□□ -0.19
BRF1-215ENST00000549655 RNASE8Q8TDE3 154 aaKnown RBP13.85□□□□□ -0.19
BRF1-215ENST00000549655 ZMAT4Q9H898 229 aa13.85□□□□□ -0.19
BRF1-215ENST00000549655 EDA2RQ9HAV5 297 aa13.85□□□□□ -0.19
BRF1-215ENST00000549655 MRPL52Q86TS9 123 aaKnown RBP13.85□□□□□ -0.19
BRF1-215ENST00000549655 G0S2P27469 103 aa13.84□□□□□ -0.19
BRF1-215ENST00000549655 INSL3P51460 131 aa13.84□□□□□ -0.19
BRF1-215ENST00000549655 LBHQ53QV2 105 aaPredicted RBP13.84□□□□□ -0.19
BRF1-215ENST00000549655 IL17DQ8TAD2 202 aa13.84□□□□□ -0.19
BRF1-215ENST00000549655 TP73-AS1Q9UF72 201 aa13.84□□□□□ -0.19
BRF1-215ENST00000549655 ANKRD39Q53RE8 183 aa13.83□□□□□ -0.19
BRF1-215ENST00000549655 C1QTNF4Q9BXJ3 329 aa13.83□□□□□ -0.19
BRF1-215ENST00000549655 CYSLTR1Q9Y271 337 aa13.83□□□□□ -0.19
BRF1-215ENST00000549655 P0DMU3 169 aa13.83□□□□□ -0.2
BRF1-215ENST00000549655 FAM231AP0DMU4 169 aa13.83□□□□□ -0.2
BRF1-215ENST00000549655 FAM231CP0DMU5 169 aa13.83□□□□□ -0.2
BRF1-215ENST00000549655 C9orf66Q5T8R8 295 aa13.83□□□□□ -0.2
BRF1-215ENST00000549655 SLC25A34Q6PIV7 304 aa13.83□□□□□ -0.2
BRF1-215ENST00000549655 TMEM263Q8WUH6 116 aaKnown RBP13.83□□□□□ -0.2
BRF1-215ENST00000549655 C2orf88Q9BSF0 95 aa13.83□□□□□ -0.2
BRF1-215ENST00000549655 TENM1Q9UKZ4 2725 aa13.83□□□□□ -0.2
BRF1-215ENST00000549655 A0A087WX48 190 aa13.82□□□□□ -0.2
BRF1-215ENST00000549655 RHODO00212 210 aa13.82□□□□□ -0.2
BRF1-215ENST00000549655 IGKCP01834 107 aa13.82□□□□□ -0.2
BRF1-215ENST00000549655 Q6ZSN1 163 aa13.82□□□□□ -0.2
BRF1-215ENST00000549655 ERASQ7Z444 233 aa13.82□□□□□ -0.2
BRF1-215ENST00000549655 MRPS16Q9Y3D3 137 aaKnown RBP13.82□□□□□ -0.2
BRF1-215ENST00000549655 RS1O15537 224 aa13.82□□□□□ -0.2
BRF1-215ENST00000549655 DPM2O94777 84 aa13.82□□□□□ -0.2
BRF1-215ENST00000549655 CSNK1G2-AS1Q8NCQ2 148 aa13.82□□□□□ -0.2
BRF1-215ENST00000549655 MRPL35Q9NZE8 188 aaKnown RBP13.82□□□□□ -0.2
BRF1-215ENST00000549655 TP53TG1Q9Y2A0 90 aa13.82□□□□□ -0.2
BRF1-215ENST00000549655 TRGV1A0A0A0MS02 117 aa13.81□□□□□ -0.2
BRF1-215ENST00000549655 TRAV12-1A0A0B4J245 112 aa13.81□□□□□ -0.2
BRF1-215ENST00000549655 GTSCR1Q86UQ5 136 aa13.81□□□□□ -0.2
BRF1-215ENST00000549655 ATRQ13535 2644 aa13.81□□□□□ -0.2
BRF1-215ENST00000549655 I3L3M4 83 aa13.8□□□□□ -0.2
BRF1-215ENST00000549655 COX8AP10176 69 aa13.8□□□□□ -0.2
BRF1-215ENST00000549655 RIPPLY3P57055 190 aa13.8□□□□□ -0.2
BRF1-215ENST00000549655 TCTAP57738 103 aa13.8□□□□□ -0.2
BRF1-215ENST00000549655 HHLA3Q9XRX5 114 aa13.8□□□□□ -0.2
BRF1-215ENST00000549655 VWFP04275 2813 aa13.8□□□□□ -0.2
BRF1-215ENST00000549655 LINC01549A6NIU2 74 aa13.8□□□□□ -0.2
BRF1-215ENST00000549655 TSHBP01222 138 aa13.8□□□□□ -0.2
BRF1-215ENST00000549655 RPL39P62891 51 aaKnown RBP13.8□□□□□ -0.2
BRF1-215ENST00000549655 NEXN-AS1Q8NBZ9 246 aa13.8□□□□□ -0.2
BRF1-215ENST00000549655 RHOHQ15669 191 aa13.79□□□□□ -0.2
BRF1-215ENST00000549655 BAALCQ8WXS3 180 aa13.79□□□□□ -0.2
BRF1-215ENST00000549655 TNFRSF18Q9Y5U5 241 aa13.79□□□□□ -0.2
BRF1-215ENST00000549655 TEP1Q99973 2627 aaKnown RBP13.79□□□□□ -0.2
BRF1-215ENST00000549655 IGHV3-53P01767 116 aa13.78□□□□□ -0.2
BRF1-215ENST00000549655 BATFQ16520 125 aa13.78□□□□□ -0.2
BRF1-215ENST00000549655 Q9UF83 564 aa13.78□□□□□ -0.2
BRF1-215ENST00000549655 IGIPA6NJ69 53 aa13.78□□□□□ -0.2
BRF1-215ENST00000549655 C16orf74Q96GX8 76 aa13.78□□□□□ -0.2
BRF1-215ENST00000549655 Q6ZTI0 123 aa13.77□□□□□ -0.21
BRF1-215ENST00000549655 OR4C5Q8NGB2 326 aa13.77□□□□□ -0.21
BRF1-215ENST00000549655 NOP10Q9NPE3 64 aaKnown RBP13.77□□□□□ -0.21
BRF1-215ENST00000549655 F8VRH5 84 aa13.76□□□□□ -0.21
BRF1-215ENST00000549655 PLNP26678 52 aa13.76□□□□□ -0.21
BRF1-215ENST00000549655 DAZ2Q13117 558 aaKnown RBP13.76□□□□□ -0.21
BRF1-215ENST00000549655 CHTOPQ9Y3Y2 248 aaKnown RBP13.76□□□□□ -0.21
BRF1-215ENST00000549655 PLAC8L1A1L4L8 177 aa13.76□□□□□ -0.21
BRF1-215ENST00000549655 PRSS29PA6NIE9 313 aa13.75□□□□□ -0.21
BRF1-215ENST00000549655 FGF6P10767 208 aa13.75□□□□□ -0.21
BRF1-215ENST00000549655 RRN3P1Q2M238 152 aa13.75□□□□□ -0.21
BRF1-215ENST00000549655 ZC2HC1BQ5TFG8 222 aa13.75□□□□□ -0.21
BRF1-215ENST00000549655 TMEM141Q96I45 108 aa13.75□□□□□ -0.21
BRF1-215ENST00000549655 TIMM17AQ99595 171 aa13.75□□□□□ -0.21
BRF1-215ENST00000549655 NMUP48645 174 aa13.74□□□□□ -0.21
BRF1-215ENST00000549655 A0A1B0GV90 55 aa13.74□□□□□ -0.21
BRF1-215ENST00000549655 C20orf203Q8NBC4 194 aa13.74□□□□□ -0.21
BRF1-215ENST00000549655 ZNF479Q96JC4 524 aa13.74□□□□□ -0.21
BRF1-215ENST00000549655 BOD1L2Q8IYS8 172 aa13.73□□□□□ -0.21
BRF1-215ENST00000549655 DNAJC30Q96LL9 226 aa13.73□□□□□ -0.21
BRF1-215ENST00000549655 HINT1P49773 126 aaPredicted RBP13.72□□□□□ -0.21
BRF1-215ENST00000549655 IGKV2D-26A0A0A0MRZ7 120 aa13.72□□□□□ -0.21
BRF1-215ENST00000549655 TRAV4A0A0B4J268 109 aa13.72□□□□□ -0.21
BRF1-215ENST00000549655 PCP2Q8IVA1 136 aa13.72□□□□□ -0.21
BRF1-215ENST00000549655 C2orf91Q6ZV80 131 aa13.71□□□□□ -0.21
BRF1-215ENST00000549655 WFDC9Q8NEX5 89 aa13.71□□□□□ -0.21
BRF1-215ENST00000549655 PMVKQ15126 192 aa13.71□□□□□ -0.22
BRF1-215ENST00000549655 OVOL2Q9BRP0 275 aa13.71□□□□□ -0.22
BRF1-215ENST00000549655 CST9LQ9H4G1 147 aa13.7□□□□□ -0.22
BRF1-215ENST00000549655 GAGE12BA1L429 117 aa13.69□□□□□ -0.22
BRF1-215ENST00000549655 DLEU1O43261 78 aa13.69□□□□□ -0.22
BRF1-215ENST00000549655 GAGE7O76087 117 aa13.69□□□□□ -0.22
BRF1-215ENST00000549655 GAGE12FP0CL80 117 aa13.69□□□□□ -0.22
BRF1-215ENST00000549655 GAGE12GP0CL81 117 aa13.69□□□□□ -0.22
BRF1-215ENST00000549655 GAGE12IP0CL82 117 aa13.69□□□□□ -0.22
BRF1-215ENST00000549655 MPV17L2Q567V2 206 aa13.69□□□□□ -0.22
BRF1-215ENST00000549655 TRGV2A0A075B6R0 118 aa13.68□□□□□ -0.22
BRF1-215ENST00000549655 COL5A1-AS1Q5SY13 56 aa13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 114.1 ms