RNA–Protein interactions for RNA: ENST00000549341.1

DEPDC4-208, Transcript of DEP domain containing 4, humanhuman

TSL 1 (best)

Gene DEPDC4, Length 541 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4-208ENST00000549341 SERF1AO75920 110 aa5.13□□□□□ -1.59
DEPDC4-208ENST00000549341 NXPH4O95158 308 aa5.13□□□□□ -1.59
DEPDC4-208ENST00000549341 MGPP08493 103 aa5.13□□□□□ -1.59
DEPDC4-208ENST00000549341 LINC00614P0C842 121 aa5.13□□□□□ -1.59
DEPDC4-208ENST00000549341 RNASE3P12724 160 aaKnown RBP5.13□□□□□ -1.59
DEPDC4-208ENST00000549341 FABP4P15090 132 aa5.13□□□□□ -1.59
DEPDC4-208ENST00000549341 HTN1P15515 57 aa5.13□□□□□ -1.59
DEPDC4-208ENST00000549341 AMTP48728 403 aa5.13□□□□□ -1.59
DEPDC4-208ENST00000549341 APOC4P55056 127 aa5.13□□□□□ -1.59
DEPDC4-208ENST00000549341 KIR3DS1Q14943 382 aa5.13□□□□□ -1.59
DEPDC4-208ENST00000549341 RNASEKQ6P5S7 137 aaKnown RBP5.13□□□□□ -1.59
DEPDC4-208ENST00000549341 PTH2Q96A98 100 aa5.13□□□□□ -1.59
DEPDC4-208ENST00000549341 C9orf85Q96MD7 179 aa5.13□□□□□ -1.59
DEPDC4-208ENST00000549341 NXT2Q9NPJ8 142 aaKnown RBP5.13□□□□□ -1.59
DEPDC4-208ENST00000549341 GSN-AS1Q9NRJ2 163 aa5.13□□□□□ -1.59
DEPDC4-208ENST00000549341 XCL2Q9UBD3 114 aa5.13□□□□□ -1.59
DEPDC4-208ENST00000549341 TP53TG3Q9ULZ0 132 aa5.13□□□□□ -1.59
DEPDC4-208ENST00000549341 DNAH6Q9C0G6 4158 aa5.12□□□□□ -1.59
DEPDC4-208ENST00000549341 H7C1H1 209 aa5.12□□□□□ -1.59
DEPDC4-208ENST00000549341 RHODO00212 210 aa5.12□□□□□ -1.59
DEPDC4-208ENST00000549341 CRXO43186 299 aaPredicted RBP5.12□□□□□ -1.59
DEPDC4-208ENST00000549341 SMIM6P0DI80 62 aa5.12□□□□□ -1.59
DEPDC4-208ENST00000549341 RPL35AP18077 110 aaKnown RBP5.12□□□□□ -1.59
DEPDC4-208ENST00000549341 EVI2AP22794 236 aa5.12□□□□□ -1.59
DEPDC4-208ENST00000549341 G0S2P27469 103 aa5.12□□□□□ -1.59
DEPDC4-208ENST00000549341 NIT1Q86X76 327 aa5.12□□□□□ -1.59
DEPDC4-208ENST00000549341 OR10D4PQ8NGN7 298 aa5.12□□□□□ -1.59
DEPDC4-208ENST00000549341 PHLDA1Q8WV24 401 aaPredicted RBP5.12□□□□□ -1.59
DEPDC4-208ENST00000549341 HIST1H2BLQ99880 126 aa5.12□□□□□ -1.59
DEPDC4-208ENST00000549341 OVOL2Q9BRP0 275 aa5.12□□□□□ -1.59
DEPDC4-208ENST00000549341 CSTL1Q9H114 145 aa5.12□□□□□ -1.59
DEPDC4-208ENST00000549341 AP5S1Q9NUS5 200 aa5.12□□□□□ -1.59
DEPDC4-208ENST00000549341 MSRB1Q9NZV6 116 aa5.12□□□□□ -1.59
DEPDC4-208ENST00000549341 IGHV3OR16-12A0A075B7B8 117 aa5.11□□□□□ -1.59
DEPDC4-208ENST00000549341 KIR2DL5BA0A0G2JN68 375 aa5.11□□□□□ -1.59
DEPDC4-208ENST00000549341 KIR2DL5BA0A0G2JPC4 375 aa5.11□□□□□ -1.59
DEPDC4-208ENST00000549341 F5H697 171 aa5.11□□□□□ -1.59
DEPDC4-208ENST00000549341 K7EMI3 77 aa5.11□□□□□ -1.59
DEPDC4-208ENST00000549341 TCAPO15273 167 aa5.11□□□□□ -1.59
DEPDC4-208ENST00000549341 CIDEAO60543 219 aa5.11□□□□□ -1.59
DEPDC4-208ENST00000549341 IQCJQ1A5X6 159 aa5.11□□□□□ -1.59
DEPDC4-208ENST00000549341 RRN3P1Q2M238 152 aa5.11□□□□□ -1.59
DEPDC4-208ENST00000549341 ZNF876PQ49A33 203 aa5.11□□□□□ -1.59
DEPDC4-208ENST00000549341 Q6ZQT7 251 aa5.11□□□□□ -1.59
DEPDC4-208ENST00000549341 LINC00336Q6ZUF6 198 aa5.11□□□□□ -1.59
DEPDC4-208ENST00000549341 ZNF575Q86XF7 245 aa5.11□□□□□ -1.59
DEPDC4-208ENST00000549341 KIR2DL5AQ8N109 375 aa5.11□□□□□ -1.59
DEPDC4-208ENST00000549341 C14orf178Q8N769 122 aaPredicted RBP5.11□□□□□ -1.59
DEPDC4-208ENST00000549341 KIR2DL5BQ8NHK3 375 aa5.11□□□□□ -1.59
DEPDC4-208ENST00000549341 TMEM263Q8WUH6 116 aaKnown RBP5.11□□□□□ -1.59
DEPDC4-208ENST00000549341 RNF185Q96GF1 192 aa5.11□□□□□ -1.59
DEPDC4-208ENST00000549341 C16orf74Q96GX8 76 aa5.11□□□□□ -1.59
DEPDC4-208ENST00000549341 C20orf78Q9BR46 151 aa5.11□□□□□ -1.59
DEPDC4-208ENST00000549341 MDFICQ9P1T7 246 aa5.11□□□□□ -1.59
DEPDC4-208ENST00000549341 HSPB8Q9UJY1 196 aa5.11□□□□□ -1.59
DEPDC4-208ENST00000549341 DNAH17Q9UFH2 4485 aa5.1□□□□□ -1.59
DEPDC4-208ENST00000549341 LOC389332A0A1B0GUA5 103 aa5.1□□□□□ -1.59
DEPDC4-208ENST00000549341 A0A1B0GVY2 172 aa5.1□□□□□ -1.59
DEPDC4-208ENST00000549341 SMIM9A6NGZ8 99 aa5.1□□□□□ -1.59
DEPDC4-208ENST00000549341 LINC01549A6NIU2 74 aa5.1□□□□□ -1.59
DEPDC4-208ENST00000549341 TNFRSF6BO95407 300 aa5.1□□□□□ -1.59
DEPDC4-208ENST00000549341 S100A12P80511 92 aa5.1□□□□□ -1.59
DEPDC4-208ENST00000549341 ZNF56Q15929 161 aa5.1□□□□□ -1.59
DEPDC4-208ENST00000549341 DEFB135Q30KP9 77 aa5.1□□□□□ -1.59
DEPDC4-208ENST00000549341 AGRNO00468 2067 aa5.09□□□□□ -1.59
DEPDC4-208ENST00000549341 C20orf202A1L168 122 aa5.09□□□□□ -1.59
DEPDC4-208ENST00000549341 PRSS29PA6NIE9 313 aa5.09□□□□□ -1.59
DEPDC4-208ENST00000549341 PRSS47A8MTI9 375 aa5.09□□□□□ -1.59
DEPDC4-208ENST00000549341 LEPROTL1O95214 131 aa5.09□□□□□ -1.59
DEPDC4-208ENST00000549341 NCR2O95944 276 aa5.09□□□□□ -1.59
DEPDC4-208ENST00000549341 NPYP01303 97 aa5.09□□□□□ -1.59
DEPDC4-208ENST00000549341 RBMY1A1P0DJD3 496 aaKnown RBP5.09□□□□□ -1.59
DEPDC4-208ENST00000549341 RBMY1CP0DJD4 496 aa5.09□□□□□ -1.59
DEPDC4-208ENST00000549341 RBMY1FQ15415 496 aaKnown RBP5.09□□□□□ -1.59
DEPDC4-208ENST00000549341 LGALS9BQ3B8N2 356 aa5.09□□□□□ -1.59
DEPDC4-208ENST00000549341 FAM74A4Q5TZK3 123 aa5.09□□□□□ -1.59
DEPDC4-208ENST00000549341 C1orf158Q8N1D5 194 aa5.09□□□□□ -1.59
DEPDC4-208ENST00000549341 POM121L12Q8N7R1 296 aa5.09□□□□□ -1.59
DEPDC4-208ENST00000549341 Q8N8P6 123 aa5.09□□□□□ -1.59
DEPDC4-208ENST00000549341 RNF183Q96D59 192 aa5.09□□□□□ -1.59
DEPDC4-208ENST00000549341 ST20Q9HBF5 79 aa5.09□□□□□ -1.59
DEPDC4-208ENST00000549341 SMKR1H3BMG3 65 aa5.08□□□□□ -1.6
DEPDC4-208ENST00000549341 SCGB1D1O95968 90 aa5.08□□□□□ -1.6
DEPDC4-208ENST00000549341 HBDP02042 147 aa5.08□□□□□ -1.6
DEPDC4-208ENST00000549341 IFI27P40305 119 aaPredicted RBP5.08□□□□□ -1.6
DEPDC4-208ENST00000549341 SUMO2P61956 95 aaKnown RBP5.08□□□□□ -1.6
DEPDC4-208ENST00000549341 RPL32P62910 135 aaKnown RBP5.08□□□□□ -1.6
DEPDC4-208ENST00000549341 DAZ2Q13117 558 aaKnown RBP5.08□□□□□ -1.6
DEPDC4-208ENST00000549341 JOSD1Q15040 202 aaPredicted RBP5.08□□□□□ -1.6
DEPDC4-208ENST00000549341 ORMDL2Q53FV1 153 aa5.08□□□□□ -1.6
DEPDC4-208ENST00000549341 LINC00518Q8N0U6 118 aa5.08□□□□□ -1.6
DEPDC4-208ENST00000549341 MAPKAPK5-AS1Q8N8E1 139 aa5.08□□□□□ -1.6
DEPDC4-208ENST00000549341 C12orf57Q99622 126 aa5.08□□□□□ -1.6
DEPDC4-208ENST00000549341 KIR2DL4Q99706 377 aa5.08□□□□□ -1.6
DEPDC4-208ENST00000549341 MAP1LC3CQ9BXW4 147 aa5.08□□□□□ -1.6
DEPDC4-208ENST00000549341 APOBP04114 4563 aaKnown RBP5.07□□□□□ -1.6
DEPDC4-208ENST00000549341 PKD1P98161 4303 aa5.07□□□□□ -1.6
DEPDC4-208ENST00000549341 A0A087WWL8 130 aa5.07□□□□□ -1.6
DEPDC4-208ENST00000549341 TRGV1A0A0A0MS02 117 aa5.07□□□□□ -1.6
DEPDC4-208ENST00000549341 IGHV1-24A0A0C4DH33 117 aa5.07□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 83.4 ms