RNA–Protein interactions for RNA: ENST00000549162.5

SCAF11-212, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 1 (best) BASIC

Gene SCAF11, Length 3,934 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-212ENST00000549162 RPL35AP18077 110 aaKnown RBP3.37□□□□□ -1.87
SCAF11-212ENST00000549162 PMCHL1Q16048 86 aa3.37□□□□□ -1.87
SCAF11-212ENST00000549162 MRPL51Q4U2R6 128 aaKnown RBP3.37□□□□□ -1.87
SCAF11-212ENST00000549162 DERL1Q9BUN8 251 aa3.37□□□□□ -1.87
SCAF11-212ENST00000549162 SPANXDQ9BXN6 97 aa3.37□□□□□ -1.87
SCAF11-212ENST00000549162 SPANXCQ9NY87 97 aa3.37□□□□□ -1.87
SCAF11-212ENST00000549162 PLXNB1O43157 2135 aa3.37□□□□□ -1.87
SCAF11-212ENST00000549162 CADP27708 2225 aa3.37□□□□□ -1.87
SCAF11-212ENST00000549162 H3BP45 60 aa3.37□□□□□ -1.87
SCAF11-212ENST00000549162 ECSCRQ19T08 205 aa3.37□□□□□ -1.87
SCAF11-212ENST00000549162 Q6ZR54 194 aa3.37□□□□□ -1.87
SCAF11-212ENST00000549162 ORMDL3Q8N138 153 aa3.37□□□□□ -1.87
SCAF11-212ENST00000549162 OR10D4PQ8NGN7 298 aa3.37□□□□□ -1.87
SCAF11-212ENST00000549162 SVEP1Q4LDE5 3571 aa3.36□□□□□ -1.87
SCAF11-212ENST00000549162 IGHV3-35A0A0C4DH35 117 aa3.36□□□□□ -1.87
SCAF11-212ENST00000549162 CNBPP62633 177 aaKnown RBP3.36□□□□□ -1.87
SCAF11-212ENST00000549162 CMTM2Q8TAZ6 248 aa3.36□□□□□ -1.87
SCAF11-212ENST00000549162 C8orf49Q96NF6 230 aa3.36□□□□□ -1.87
SCAF11-212ENST00000549162 USF3Q68DE3 2245 aa3.36□□□□□ -1.87
SCAF11-212ENST00000549162 TRAV8-4A0A0B4J246 113 aa3.36□□□□□ -1.87
SCAF11-212ENST00000549162 FABP4P15090 132 aa3.36□□□□□ -1.87
SCAF11-212ENST00000549162 ZNF462Q96JM2 2506 aa3.36□□□□□ -1.87
SCAF11-212ENST00000549162 FAM186AA6NE01 2351 aa3.36□□□□□ -1.87
SCAF11-212ENST00000549162 F5H768 121 aa3.36□□□□□ -1.87
SCAF11-212ENST00000549162 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP3.36□□□□□ -1.87
SCAF11-212ENST00000549162 FGF6P10767 208 aa3.36□□□□□ -1.87
SCAF11-212ENST00000549162 HES1Q14469 280 aa3.36□□□□□ -1.87
SCAF11-212ENST00000549162 LELP1Q5T871 98 aa3.36□□□□□ -1.87
SCAF11-212ENST00000549162 ST20Q9HBF5 79 aa3.36□□□□□ -1.87
SCAF11-212ENST00000549162 MED12Q93074 2177 aa3.36□□□□□ -1.87
SCAF11-212ENST00000549162 IGHV3OR16-12A0A075B7B8 117 aa3.35□□□□□ -1.87
SCAF11-212ENST00000549162 A0A0J9YWU9 116 aa3.35□□□□□ -1.87
SCAF11-212ENST00000549162 H3BQ85 93 aa3.35□□□□□ -1.87
SCAF11-212ENST00000549162 K7EQD1 137 aa3.35□□□□□ -1.87
SCAF11-212ENST00000549162 SEC11AP67812 179 aa3.35□□□□□ -1.87
SCAF11-212ENST00000549162 EXOC3-AS1Q8N2X6 119 aa3.35□□□□□ -1.87
SCAF11-212ENST00000549162 UBE2D4Q9Y2X8 147 aa3.35□□□□□ -1.87
SCAF11-212ENST00000549162 MGAQ8IWI9 3026 aa3.35□□□□□ -1.87
SCAF11-212ENST00000549162 IGLV5-52A0A0A0MRZ9 124 aa3.35□□□□□ -1.87
SCAF11-212ENST00000549162 HIGD1CA8MV81 97 aa3.35□□□□□ -1.87
SCAF11-212ENST00000549162 C3orf84H3BNL1 204 aa3.35□□□□□ -1.87
SCAF11-212ENST00000549162 TRGC2P03986 189 aa3.35□□□□□ -1.87
SCAF11-212ENST00000549162 CD7P09564 240 aa3.35□□□□□ -1.87
SCAF11-212ENST00000549162 Q6ZRN7 208 aaPredicted RBP3.35□□□□□ -1.87
SCAF11-212ENST00000549162 GOLT1AQ6ZVE7 132 aa3.35□□□□□ -1.87
SCAF11-212ENST00000549162 C20orf203Q8NBC4 194 aa3.35□□□□□ -1.87
SCAF11-212ENST00000549162 IGLV4-69A0A075B6H9 119 aa3.35□□□□□ -1.87
SCAF11-212ENST00000549162 H0Y9J4 135 aa3.35□□□□□ -1.87
SCAF11-212ENST00000549162 NDUFC2O95298 119 aa3.35□□□□□ -1.87
SCAF11-212ENST00000549162 PRH1P02810 166 aa3.35□□□□□ -1.87
SCAF11-212ENST00000549162 CXCL5P42830 114 aa3.35□□□□□ -1.87
SCAF11-212ENST00000549162 LTC4SQ16873 150 aa3.35□□□□□ -1.87
SCAF11-212ENST00000549162 C18orf65Q6ZTR6 163 aa3.35□□□□□ -1.87
SCAF11-212ENST00000549162 SMIM3Q9BZL3 60 aa3.35□□□□□ -1.87
SCAF11-212ENST00000549162 MUC4Q99102 2169 aa3.35□□□□□ -1.87
SCAF11-212ENST00000549162 MED13LQ71F56 2210 aa3.34□□□□□ -1.87
SCAF11-212ENST00000549162 I3L3M4 83 aa3.34□□□□□ -1.87
SCAF11-212ENST00000549162 PLNP26678 52 aa3.34□□□□□ -1.87
SCAF11-212ENST00000549162 FAM222AQ5U5X8 452 aa3.34□□□□□ -1.87
SCAF11-212ENST00000549162 CBLN2Q8IUK8 224 aa3.34□□□□□ -1.87
SCAF11-212ENST00000549162 SREK1IP1Q8N9Q2 155 aaPredicted RBP3.34□□□□□ -1.87
SCAF11-212ENST00000549162 PPDPFLQ8WWR9 84 aa3.34□□□□□ -1.87
SCAF11-212ENST00000549162 FAM103A1Q9BTL3 118 aaKnown RBP3.34□□□□□ -1.87
SCAF11-212ENST00000549162 EIF5A2Q9GZV4 153 aaKnown RBP3.34□□□□□ -1.87
SCAF11-212ENST00000549162 APLNQ9ULZ1 77 aa3.34□□□□□ -1.87
SCAF11-212ENST00000549162 HHLA3Q9XRX5 114 aa3.34□□□□□ -1.87
SCAF11-212ENST00000549162 GOLGA4Q13439 2230 aaKnown RBP3.34□□□□□ -1.87
SCAF11-212ENST00000549162 PRRC2CQ9Y520 2896 aaKnown RBP3.34□□□□□ -1.87
SCAF11-212ENST00000549162 ABCA4P78363 2273 aa3.34□□□□□ -1.87
SCAF11-212ENST00000549162 A0A087WX48 190 aa3.34□□□□□ -1.87
SCAF11-212ENST00000549162 APCSP02743 223 aa3.34□□□□□ -1.87
SCAF11-212ENST00000549162 LYZL1Q6UWQ5 148 aa3.34□□□□□ -1.87
SCAF11-212ENST00000549162 MRAPQ8TCY5 172 aa3.34□□□□□ -1.87
SCAF11-212ENST00000549162 NTN5Q8WTR8 489 aaPredicted RBP3.34□□□□□ -1.87
SCAF11-212ENST00000549162 VSIG2Q96IQ7 327 aa3.34□□□□□ -1.87
SCAF11-212ENST00000549162 FREM2Q5SZK8 3169 aa3.34□□□□□ -1.88
SCAF11-212ENST00000549162 A0A1B0GX51 115 aa3.34□□□□□ -1.88
SCAF11-212ENST00000549162 K7EIL1 84 aa3.34□□□□□ -1.88
SCAF11-212ENST00000549162 P0DMU3 169 aa3.34□□□□□ -1.88
SCAF11-212ENST00000549162 FAM231AP0DMU4 169 aa3.34□□□□□ -1.88
SCAF11-212ENST00000549162 FAM231CP0DMU5 169 aa3.34□□□□□ -1.88
SCAF11-212ENST00000549162 ORM2P19652 201 aa3.34□□□□□ -1.88
SCAF11-212ENST00000549162 SYNJ2BPP57105 145 aa3.34□□□□□ -1.88
SCAF11-212ENST00000549162 C10orf99Q6UWK7 81 aa3.34□□□□□ -1.88
SCAF11-212ENST00000549162 ZNF207O43670 478 aaKnown RBP3.33□□□□□ -1.88
SCAF11-212ENST00000549162 UBE2D1P51668 147 aa3.33□□□□□ -1.88
SCAF11-212ENST00000549162 IGFL4Q6B9Z1 124 aa3.33□□□□□ -1.88
SCAF11-212ENST00000549162 C2orf66Q6UXQ4 117 aa3.33□□□□□ -1.88
SCAF11-212ENST00000549162 TMEM70Q9BUB7 260 aa3.33□□□□□ -1.88
SCAF11-212ENST00000549162 EPG5Q9HCE0 2579 aa3.33□□□□□ -1.88
SCAF11-212ENST00000549162 CYSRT1A8MQ03 144 aa3.33□□□□□ -1.88
SCAF11-212ENST00000549162 TMEM238C9JI98 176 aa3.33□□□□□ -1.88
SCAF11-212ENST00000549162 GTSCR1Q86UQ5 136 aa3.33□□□□□ -1.88
SCAF11-212ENST00000549162 HSPB8Q9UJY1 196 aa3.33□□□□□ -1.88
SCAF11-212ENST00000549162 A0A1B0GW54 56 aa3.33□□□□□ -1.88
SCAF11-212ENST00000549162 IBA57-AS1B1ANH7 110 aa3.33□□□□□ -1.88
SCAF11-212ENST00000549162 E9PLD3 99 aa3.33□□□□□ -1.88
SCAF11-212ENST00000549162 HIST1H2BLQ99880 126 aa3.33□□□□□ -1.88
SCAF11-212ENST00000549162 Q6ZSA8 131 aa3.32□□□□□ -1.88
SCAF11-212ENST00000549162 ZNF738Q8NE65 137 aa3.32□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms