RNA–Protein interactions for RNA: ENST00000548945.6

PTCH1-218, Transcript of patched 1, humanhuman

TSL 1 (best)

Gene PTCH1, Length 243 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-218ENST00000548945 IL36BQ9NZH7 164 aa8.47□□□□□ -1.05
PTCH1-218ENST00000548945 TRAV34A0A0B4J273 112 aa8.46□□□□□ -1.06
PTCH1-218ENST00000548945 FABP5P3A8MUU1 101 aa8.46□□□□□ -1.06
PTCH1-218ENST00000548945 RHODO00212 210 aa8.46□□□□□ -1.06
PTCH1-218ENST00000548945 LECT2O14960 151 aa8.46□□□□□ -1.06
PTCH1-218ENST00000548945 ASIPP42127 132 aa8.46□□□□□ -1.06
PTCH1-218ENST00000548945 Q86TA4 180 aa8.46□□□□□ -1.06
PTCH1-218ENST00000548945 LINC01551Q86U37 167 aa8.46□□□□□ -1.06
PTCH1-218ENST00000548945 BAGE2Q86Y30 109 aa8.46□□□□□ -1.06
PTCH1-218ENST00000548945 Q8N976 141 aa8.46□□□□□ -1.06
PTCH1-218ENST00000548945 IGLV2-33A0A075B6J2 118 aaPredicted RBP8.45□□□□□ -1.06
PTCH1-218ENST00000548945 C7orf77A4D0Y5 90 aa8.45□□□□□ -1.06
PTCH1-218ENST00000548945 LTAP01374 205 aa8.45□□□□□ -1.06
PTCH1-218ENST00000548945 DNLZQ5SXM8 178 aa8.45□□□□□ -1.06
PTCH1-218ENST00000548945 OCC1Q8TAD7 63 aa8.45□□□□□ -1.06
PTCH1-218ENST00000548945 BAALCQ8WXS3 180 aa8.45□□□□□ -1.06
PTCH1-218ENST00000548945 CHCHD7Q9BUK0 85 aa8.45□□□□□ -1.06
PTCH1-218ENST00000548945 ZFP30Q9Y2G7 519 aa8.45□□□□□ -1.06
PTCH1-218ENST00000548945 URGCP-MRPS24S4R325 110 aa8.45□□□□□ -1.06
PTCH1-218ENST00000548945 LRP1Q07954 4544 aaKnown RBP8.44□□□□□ -1.06
PTCH1-218ENST00000548945 ATRAIDQ6UW56 229 aa8.44□□□□□ -1.06
PTCH1-218ENST00000548945 SCXQ7RTU7 201 aa8.44□□□□□ -1.06
PTCH1-218ENST00000548945 NIT1Q86X76 327 aa8.44□□□□□ -1.06
PTCH1-218ENST00000548945 C14orf178Q8N769 122 aaPredicted RBP8.44□□□□□ -1.06
PTCH1-218ENST00000548945 SYT8Q8NBV8 401 aa8.44□□□□□ -1.06
PTCH1-218ENST00000548945 ISOC2Q96AB3 205 aa8.44□□□□□ -1.06
PTCH1-218ENST00000548945 CHAC1Q9BUX1 264 aa8.44□□□□□ -1.06
PTCH1-218ENST00000548945 RPS10P5Q9NQ39 176 aa8.44□□□□□ -1.06
PTCH1-218ENST00000548945 BIN3Q9NQY0 253 aa8.44□□□□□ -1.06
PTCH1-218ENST00000548945 Q9UF83 564 aa8.44□□□□□ -1.06
PTCH1-218ENST00000548945 IGLV2-8P01709 118 aa8.43□□□□□ -1.06
PTCH1-218ENST00000548945 MT-ND4LP03901 98 aa8.43□□□□□ -1.06
PTCH1-218ENST00000548945 ELOBQ15370 118 aa8.43□□□□□ -1.06
PTCH1-218ENST00000548945 SERTAD4-AS1Q5TG53 156 aa8.43□□□□□ -1.06
PTCH1-218ENST00000548945 DMRTA1Q5VZB9 504 aa8.43□□□□□ -1.06
PTCH1-218ENST00000548945 COX8CQ7Z4L0 72 aa8.43□□□□□ -1.06
PTCH1-218ENST00000548945 MLST8Q9BVC4 326 aa8.43□□□□□ -1.06
PTCH1-218ENST00000548945 SAMD10Q9BYL1 202 aa8.43□□□□□ -1.06
PTCH1-218ENST00000548945 JPT2Q9H910 190 aa8.43□□□□□ -1.06
PTCH1-218ENST00000548945 H3BVH4 76 aa8.42□□□□□ -1.06
PTCH1-218ENST00000548945 K7EN84 100 aa8.42□□□□□ -1.06
PTCH1-218ENST00000548945 PPP1R2P9O14990 202 aa8.42□□□□□ -1.06
PTCH1-218ENST00000548945 ANAPC16Q96DE5 110 aa8.42□□□□□ -1.06
PTCH1-218ENST00000548945 SFRP2Q96HF1 295 aa8.42□□□□□ -1.06
PTCH1-218ENST00000548945 CTDSP1Q9GZU7 261 aa8.42□□□□□ -1.06
PTCH1-218ENST00000548945 IGKV2D-24A0A075B6R9 120 aa8.41□□□□□ -1.06
PTCH1-218ENST00000548945 A0A087WX48 190 aa8.41□□□□□ -1.06
PTCH1-218ENST00000548945 TRBV10-1A0A0K0K1A3 114 aa8.41□□□□□ -1.06
PTCH1-218ENST00000548945 SCO1O75880 301 aa8.41□□□□□ -1.06
PTCH1-218ENST00000548945 ARMS2P0C7Q2 107 aa8.41□□□□□ -1.06
PTCH1-218ENST00000548945 KRTAP10-4P60372 401 aaPredicted RBP8.41□□□□□ -1.06
PTCH1-218ENST00000548945 LINC01620Q4KN68 170 aa8.41□□□□□ -1.06
PTCH1-218ENST00000548945 C15orf54Q8N8G6 183 aa8.41□□□□□ -1.06
PTCH1-218ENST00000548945 TMEM242Q9NWH2 141 aa8.41□□□□□ -1.06
PTCH1-218ENST00000548945 KLK12Q9UKR0 248 aa8.41□□□□□ -1.06
PTCH1-218ENST00000548945 OXTP01178 125 aa8.4□□□□□ -1.06
PTCH1-218ENST00000548945 CRIP1P50238 77 aa8.4□□□□□ -1.06
PTCH1-218ENST00000548945 Q0VG73 95 aa8.4□□□□□ -1.06
PTCH1-218ENST00000548945 C14orf177Q52M58 125 aa8.4□□□□□ -1.06
PTCH1-218ENST00000548945 FAM162BQ5T6X4 162 aa8.4□□□□□ -1.06
PTCH1-218ENST00000548945 FAM74A4Q5TZK3 123 aa8.4□□□□□ -1.06
PTCH1-218ENST00000548945 KCNIP4Q6PIL6 250 aa8.4□□□□□ -1.06
PTCH1-218ENST00000548945 FAM231DQ6ZW35 169 aa8.4□□□□□ -1.06
PTCH1-218ENST00000548945 OR10G8Q8NGN5 311 aa8.4□□□□□ -1.06
PTCH1-218ENST00000548945 OSTCQ9NRP0 149 aa8.4□□□□□ -1.06
PTCH1-218ENST00000548945 SMCO4Q9NRQ5 59 aa8.4□□□□□ -1.06
PTCH1-218ENST00000548945 PHLDA3Q9Y5J5 127 aa8.4□□□□□ -1.06
PTCH1-218ENST00000548945 FAT3Q8TDW7 4589 aa8.39□□□□□ -1.07
PTCH1-218ENST00000548945 HMCN2Q8NDA2 5059 aa8.39□□□□□ -1.07
PTCH1-218ENST00000548945 RPL36AP83881 106 aaKnown RBP8.39□□□□□ -1.07
PTCH1-218ENST00000548945 PRR27Q6MZM9 219 aa8.39□□□□□ -1.07
PTCH1-218ENST00000548945 CIRBP-AS1Q8TBR5 109 aa8.39□□□□□ -1.07
PTCH1-218ENST00000548945 RPL36ALQ969Q0 106 aaKnown RBP8.39□□□□□ -1.07
PTCH1-218ENST00000548945 UBE2WQ96B02 151 aa8.39□□□□□ -1.07
PTCH1-218ENST00000548945 ZC2HC1AQ96GY0 325 aa8.39□□□□□ -1.07
PTCH1-218ENST00000548945 TRBV7-3A0A075B6L6 115 aa8.38□□□□□ -1.07
PTCH1-218ENST00000548945 A0A087WWL8 130 aa8.38□□□□□ -1.07
PTCH1-218ENST00000548945 SH2D1AO60880 128 aa8.38□□□□□ -1.07
PTCH1-218ENST00000548945 UBE2D3P61077 147 aa8.38□□□□□ -1.07
PTCH1-218ENST00000548945 UBE2D2P62837 147 aa8.38□□□□□ -1.07
PTCH1-218ENST00000548945 LINC01559Q495D7 138 aa8.38□□□□□ -1.07
PTCH1-218ENST00000548945 CBLN2Q8IUK8 224 aa8.38□□□□□ -1.07
PTCH1-218ENST00000548945 ZFP82Q8N141 532 aa8.38□□□□□ -1.07
PTCH1-218ENST00000548945 DAZAP1Q96EP5 407 aaKnown RBP8.38□□□□□ -1.07
PTCH1-218ENST00000548945 DNAJC30Q96LL9 226 aa8.38□□□□□ -1.07
PTCH1-218ENST00000548945 RNASE7Q9H1E1 156 aaKnown RBP8.38□□□□□ -1.07
PTCH1-218ENST00000548945 PKHD1L1Q86WI1 4243 aa8.37□□□□□ -1.07
PTCH1-218ENST00000548945 GRIFINA4D1Z8 144 aa8.37□□□□□ -1.07
PTCH1-218ENST00000548945 C19orf71A6NCJ1 209 aa8.37□□□□□ -1.07
PTCH1-218ENST00000548945 P01737 135 aa8.37□□□□□ -1.07
PTCH1-218ENST00000548945 C1orf43Q9BWL3 253 aa8.37□□□□□ -1.07
PTCH1-218ENST00000548945 M0R381 172 aa8.36□□□□□ -1.07
PTCH1-218ENST00000548945 GATCO43716 136 aaKnown RBP8.36□□□□□ -1.07
PTCH1-218ENST00000548945 S100PP25815 95 aa8.36□□□□□ -1.07
PTCH1-218ENST00000548945 PKIAP61925 76 aa8.36□□□□□ -1.07
PTCH1-218ENST00000548945 CT83Q5H943 113 aa8.36□□□□□ -1.07
PTCH1-218ENST00000548945 NUDT10Q8NFP7 164 aa8.36□□□□□ -1.07
PTCH1-218ENST00000548945 NUDT11Q96G61 164 aa8.36□□□□□ -1.07
PTCH1-218ENST00000548945 IMMP2LQ96T52 175 aa8.36□□□□□ -1.07
PTCH1-218ENST00000548945 V9GYV3 84 aa8.36□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms