RNA–Protein interactions for RNA: ENST00000548421.2

BRF1-213, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 1 (best) BASIC

Gene BRF1, Length 1,452 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-213ENST00000548421 TRBV10-1A0A0K0K1A3 114 aa20.22■□□□□ 0.83
BRF1-213ENST00000548421 PRADC1Q9BSG0 188 aa20.22■□□□□ 0.83
BRF1-213ENST00000548421 DEFB131BA0A096LNP1 70 aa20.19■□□□□ 0.82
BRF1-213ENST00000548421 NEXN-AS1Q8NBZ9 246 aa20.19■□□□□ 0.82
BRF1-213ENST00000548421 DNAJC30Q96LL9 226 aa20.19■□□□□ 0.82
BRF1-213ENST00000548421 Q9UF83 564 aa20.19■□□□□ 0.82
BRF1-213ENST00000548421 TRAV10A0A0B4J240 114 aa20.18■□□□□ 0.82
BRF1-213ENST00000548421 TRBV6-5A0A0K0K1A5 114 aa20.18■□□□□ 0.82
BRF1-213ENST00000548421 PAX4O43316 350 aa20.18■□□□□ 0.82
BRF1-213ENST00000548421 TRAV26-1A0A087WT03 109 aa20.18■□□□□ 0.82
BRF1-213ENST00000548421 HIST1H2BKO60814 126 aa20.18■□□□□ 0.82
BRF1-213ENST00000548421 HIST1H2BJP06899 126 aa20.18■□□□□ 0.82
BRF1-213ENST00000548421 HIST1H2BOP23527 126 aa20.18■□□□□ 0.82
BRF1-213ENST00000548421 HIST1H2BBP33778 126 aa20.18■□□□□ 0.82
BRF1-213ENST00000548421 HIST1H2BDP58876 126 aa20.18■□□□□ 0.82
BRF1-213ENST00000548421 RAB5BP61020 215 aa20.18■□□□□ 0.82
BRF1-213ENST00000548421 HIST1H2BCP62807 126 aa20.18■□□□□ 0.82
BRF1-213ENST00000548421 HIST2H2BEQ16778 126 aa20.18■□□□□ 0.82
BRF1-213ENST00000548421 HIST2H2BFQ5QNW6 126 aaPredicted RBP20.18■□□□□ 0.82
BRF1-213ENST00000548421 HIST1H2BHQ93079 126 aa20.18■□□□□ 0.82
BRF1-213ENST00000548421 HIST1H2BNQ99877 126 aa20.18■□□□□ 0.82
BRF1-213ENST00000548421 HIST1H2BMQ99879 126 aa20.18■□□□□ 0.82
BRF1-213ENST00000548421 C20orf78Q9BR46 151 aa20.18■□□□□ 0.82
BRF1-213ENST00000548421 ST20Q9HBF5 79 aa20.18■□□□□ 0.82
BRF1-213ENST00000548421 TNFRSF18Q9Y5U5 241 aa20.18■□□□□ 0.82
BRF1-213ENST00000548421 SUMO2P61956 95 aaKnown RBP20.17■□□□□ 0.82
BRF1-213ENST00000548421 C18orf32Q8TCD1 76 aa20.17■□□□□ 0.82
BRF1-213ENST00000548421 MAP1LC3AQ9H492 121 aa20.17■□□□□ 0.82
BRF1-213ENST00000548421 RPL36AP83881 106 aaKnown RBP20.16■□□□□ 0.82
BRF1-213ENST00000548421 RPL36ALQ969Q0 106 aaKnown RBP20.16■□□□□ 0.82
BRF1-213ENST00000548421 VSIG2Q96IQ7 327 aa20.16■□□□□ 0.82
BRF1-213ENST00000548421 TRBV7-3A0A075B6L6 115 aa20.15■□□□□ 0.82
BRF1-213ENST00000548421 A0A0J9YY99 117 aa20.15■□□□□ 0.82
BRF1-213ENST00000548421 LOC100131303A0A0U1RQF7 123 aa20.15■□□□□ 0.82
BRF1-213ENST00000548421 GYPEP15421 78 aa20.14■□□□□ 0.81
BRF1-213ENST00000548421 ZNRF2Q8NHG8 242 aa20.14■□□□□ 0.81
BRF1-213ENST00000548421 GAGE12JA6NER3 117 aa20.13■□□□□ 0.81
BRF1-213ENST00000548421 SDHAF1A6NFY7 115 aa20.13■□□□□ 0.81
BRF1-213ENST00000548421 PRSS47A8MTI9 375 aa20.13■□□□□ 0.81
BRF1-213ENST00000548421 GAGE1Q13065 139 aa20.13■□□□□ 0.81
BRF1-213ENST00000548421 GAGE4Q13068 117 aa20.13■□□□□ 0.81
BRF1-213ENST00000548421 GAGE5Q13069 117 aa20.13■□□□□ 0.81
BRF1-213ENST00000548421 IQCJQ1A5X6 159 aa20.13■□□□□ 0.81
BRF1-213ENST00000548421 GAGE13Q4V321 117 aa20.13■□□□□ 0.81
BRF1-213ENST00000548421 LOC389332A0A1B0GUA5 103 aa20.12■□□□□ 0.81
BRF1-213ENST00000548421 TMEM70Q9BUB7 260 aa20.12■□□□□ 0.81
BRF1-213ENST00000548421 RPL32P62910 135 aaKnown RBP20.11■□□□□ 0.81
BRF1-213ENST00000548421 Q0VG73 95 aa20.11■□□□□ 0.81
BRF1-213ENST00000548421 PHLDA1Q8WV24 401 aaPredicted RBP20.11■□□□□ 0.81
BRF1-213ENST00000548421 H3BNG1 76 aa20.11■□□□□ 0.81
BRF1-213ENST00000548421 POLR2KP53803 58 aaKnown RBP20.11■□□□□ 0.81
BRF1-213ENST00000548421 SMIM2Q9BVW6 85 aa20.11■□□□□ 0.81
BRF1-213ENST00000548421 LINC00694P0DN24 101 aa20.1■□□□□ 0.81
BRF1-213ENST00000548421 DNAH7Q8WXX0 4024 aa20.1■□□□□ 0.81
BRF1-213ENST00000548421 TGP01266 2768 aa20.09■□□□□ 0.81
BRF1-213ENST00000548421 PMCHP20382 165 aa20.09■□□□□ 0.81
BRF1-213ENST00000548421 UBE2D3P61077 147 aa20.09■□□□□ 0.81
BRF1-213ENST00000548421 UBE2D2P62837 147 aa20.09■□□□□ 0.81
BRF1-213ENST00000548421 IFI27P40305 119 aaPredicted RBP20.08■□□□□ 0.81
BRF1-213ENST00000548421 PRSS3P2Q8NHM4 247 aa20.08■□□□□ 0.81
BRF1-213ENST00000548421 NXT2Q9NPJ8 142 aaKnown RBP20.08■□□□□ 0.81
BRF1-213ENST00000548421 TRBV27A0A0K0K1C4 114 aa20.07■□□□□ 0.8
BRF1-213ENST00000548421 VCYO14598 125 aa20.07■□□□□ 0.8
BRF1-213ENST00000548421 BAGE3Q86Y29 109 aa20.07■□□□□ 0.8
BRF1-213ENST00000548421 Q8N8P6 123 aa20.07■□□□□ 0.8
BRF1-213ENST00000548421 IGLV2-18A0A075B6J9 118 aa20.06■□□□□ 0.8
BRF1-213ENST00000548421 NEGR1Q7Z3B1 354 aa20.06■□□□□ 0.8
BRF1-213ENST00000548421 DAZ4Q86SG3 579 aaKnown RBP20.06■□□□□ 0.8
BRF1-213ENST00000548421 DAZ3Q9NR90 486 aaKnown RBP20.06■□□□□ 0.8
BRF1-213ENST00000548421 ICOSQ9Y6W8 199 aa20.06■□□□□ 0.8
BRF1-213ENST00000548421 I3L3M4 83 aa20.05■□□□□ 0.8
BRF1-213ENST00000548421 MRPL23Q16540 153 aaKnown RBP20.05■□□□□ 0.8
BRF1-213ENST00000548421 KIR2DL4Q99706 377 aa20.04■□□□□ 0.8
BRF1-213ENST00000548421 IGHV3-38A0A0C4DH36 116 aa20.03■□□□□ 0.8
BRF1-213ENST00000548421 FA2HQ7L5A8 372 aa20.03■□□□□ 0.8
BRF1-213ENST00000548421 NIT1Q86X76 327 aa20.03■□□□□ 0.8
BRF1-213ENST00000548421 A0A096LPF7 62 aa20.02■□□□□ 0.8
BRF1-213ENST00000548421 SH2D6Q7Z4S9 175 aa20.02■□□□□ 0.8
BRF1-213ENST00000548421 ATP6V0E2Q8NHE4 81 aa20.02■□□□□ 0.8
BRF1-213ENST00000548421 TMA7Q9Y2S6 64 aaKnown RBP20.02■□□□□ 0.8
BRF1-213ENST00000548421 LINC00614P0C842 121 aa20.01■□□□□ 0.79
BRF1-213ENST00000548421 NDUFA6P56556 154 aa20.01■□□□□ 0.79
BRF1-213ENST00000548421 URB1-AS1Q96HZ7 61 aa20.01■□□□□ 0.79
BRF1-213ENST00000548421 RNASEKQ6P5S7 137 aaKnown RBP20■□□□□ 0.79
BRF1-213ENST00000548421 AP5S1Q9NUS5 200 aa19.99■□□□□ 0.79
BRF1-213ENST00000548421 DYNC2H1Q8NCM8 4307 aaKnown RBP19.99■□□□□ 0.79
BRF1-213ENST00000548421 LINC01546A6NGU7 62 aa19.99■□□□□ 0.79
BRF1-213ENST00000548421 K7EMI3 77 aa19.99■□□□□ 0.79
BRF1-213ENST00000548421 TCAPO15273 167 aa19.99■□□□□ 0.79
BRF1-213ENST00000548421 SERF1AO75920 110 aa19.99■□□□□ 0.79
BRF1-213ENST00000548421 NUDT3O95989 172 aa19.99■□□□□ 0.79
BRF1-213ENST00000548421 FCER1GP30273 86 aa19.99■□□□□ 0.79
BRF1-213ENST00000548421 COTL1Q14019 142 aa19.99■□□□□ 0.79
BRF1-213ENST00000548421 COA6Q5JTJ3 125 aaKnown RBP19.99■□□□□ 0.79
BRF1-213ENST00000548421 C15orf53Q8NAA6 179 aa19.99■□□□□ 0.79
BRF1-213ENST00000548421 DEFB104AQ8WTQ1 72 aa19.99■□□□□ 0.79
BRF1-213ENST00000548421 CHCHD1Q96BP2 118 aaKnown RBP19.99■□□□□ 0.79
BRF1-213ENST00000548421 NUPR2A6NF83 97 aa19.98■□□□□ 0.79
BRF1-213ENST00000548421 IGLL5B9A064 214 aa19.98■□□□□ 0.79
BRF1-213ENST00000548421 TSHBP01222 138 aa19.98■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms