RNA–Protein interactions for RNA: ENST00000548122.2

PTPRB-206, Transcript of protein tyrosine phosphatase, receptor type B, humanhuman

TSL 2

Gene PTPRB, Length 4,237 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRB-206ENST00000548122 C2orf83Q53S99 150 aa4.25□□□□□ -1.73
PTPRB-206ENST00000548122 NMSQ5H8A3 153 aa4.25□□□□□ -1.73
PTPRB-206ENST00000548122 C18orf65Q6ZTR6 163 aa4.25□□□□□ -1.73
PTPRB-206ENST00000548122 TSKUQ8WUA8 353 aa4.25□□□□□ -1.73
PTPRB-206ENST00000548122 SCGB3A1Q96QR1 104 aa4.25□□□□□ -1.73
PTPRB-206ENST00000548122 SORL1Q92673 2214 aa4.25□□□□□ -1.73
PTPRB-206ENST00000548122 A0A0G2JRQ6 117 aa4.25□□□□□ -1.73
PTPRB-206ENST00000548122 PLAC8L1A1L4L8 177 aa4.25□□□□□ -1.73
PTPRB-206ENST00000548122 SEC11AP67812 179 aa4.25□□□□□ -1.73
PTPRB-206ENST00000548122 RIGQ13278 110 aa4.25□□□□□ -1.73
PTPRB-206ENST00000548122 PAPPA-AS1Q5QFB9 102 aa4.25□□□□□ -1.73
PTPRB-206ENST00000548122 FAM19A5Q7Z5A7 132 aaPredicted RBP4.25□□□□□ -1.73
PTPRB-206ENST00000548122 TET2Q6N021 2002 aaPredicted RBP4.25□□□□□ -1.73
PTPRB-206ENST00000548122 HBBP68871 147 aa4.25□□□□□ -1.73
PTPRB-206ENST00000548122 PRR20EP86478 221 aa4.25□□□□□ -1.73
PTPRB-206ENST00000548122 PRR20CP86479 221 aa4.25□□□□□ -1.73
PTPRB-206ENST00000548122 PRR20DP86480 221 aa4.25□□□□□ -1.73
PTPRB-206ENST00000548122 PRR20BP86481 221 aa4.25□□□□□ -1.73
PTPRB-206ENST00000548122 PRR20AP86496 221 aa4.25□□□□□ -1.73
PTPRB-206ENST00000548122 ZNF493Q6ZR52 646 aa4.25□□□□□ -1.73
PTPRB-206ENST00000548122 COX8CQ7Z4L0 72 aa4.25□□□□□ -1.73
PTPRB-206ENST00000548122 LINC01561Q8N1V8 128 aa4.25□□□□□ -1.73
PTPRB-206ENST00000548122 SYT8Q8NBV8 401 aa4.25□□□□□ -1.73
PTPRB-206ENST00000548122 PPDPFLQ8WWR9 84 aa4.25□□□□□ -1.73
PTPRB-206ENST00000548122 TNCP24821 2201 aa4.24□□□□□ -1.73
PTPRB-206ENST00000548122 DCHS2Q6V1P9 2916 aa4.24□□□□□ -1.73
PTPRB-206ENST00000548122 IGLC7A0M8Q6 106 aa4.24□□□□□ -1.73
PTPRB-206ENST00000548122 RCHY1Q96PM5 261 aa4.24□□□□□ -1.73
PTPRB-206ENST00000548122 RHPN1-AS1Q9BWJ2 59 aa4.24□□□□□ -1.73
PTPRB-206ENST00000548122 K7ERJ3 54 aa4.24□□□□□ -1.73
PTPRB-206ENST00000548122 IGKV3-20P01619 116 aa4.24□□□□□ -1.73
PTPRB-206ENST00000548122 IGLV2-23P01705 113 aa4.24□□□□□ -1.73
PTPRB-206ENST00000548122 HTN1P15515 57 aa4.24□□□□□ -1.73
PTPRB-206ENST00000548122 PSMB8P28062 276 aa4.24□□□□□ -1.73
PTPRB-206ENST00000548122 Q0VG73 95 aa4.24□□□□□ -1.73
PTPRB-206ENST00000548122 FBN2P35556 2912 aa4.24□□□□□ -1.73
PTPRB-206ENST00000548122 IGLV5-45A0A087WSX0 123 aa4.24□□□□□ -1.73
PTPRB-206ENST00000548122 ZNF815PA8K554 130 aa4.24□□□□□ -1.73
PTPRB-206ENST00000548122 PROP1O75360 226 aa4.24□□□□□ -1.73
PTPRB-206ENST00000548122 IGKV1-5P01602 117 aa4.24□□□□□ -1.73
PTPRB-206ENST00000548122 IGLC1P0CG04 106 aa4.24□□□□□ -1.73
PTPRB-206ENST00000548122 Q6ZRM9 215 aa4.24□□□□□ -1.73
PTPRB-206ENST00000548122 Q8N2B8 174 aa4.24□□□□□ -1.73
PTPRB-206ENST00000548122 FXYD5Q96DB9 178 aa4.24□□□□□ -1.73
PTPRB-206ENST00000548122 CHAC1Q9BUX1 264 aa4.24□□□□□ -1.73
PTPRB-206ENST00000548122 NDUFA4L2Q9NRX3 87 aa4.24□□□□□ -1.73
PTPRB-206ENST00000548122 NIPBLQ6KC79 2804 aaeCLIP4.24□□□□□ -1.73
PTPRB-206ENST00000548122 IZUMO1RA6ND01 250 aa4.23□□□□□ -1.73
PTPRB-206ENST00000548122 WT1-ASQ06250 92 aa4.23□□□□□ -1.73
PTPRB-206ENST00000548122 Q6ZPA2 131 aa4.23□□□□□ -1.73
PTPRB-206ENST00000548122 KIR2DL5BQ8NHK3 375 aa4.23□□□□□ -1.73
PTPRB-206ENST00000548122 ERG28Q9UKR5 140 aa4.23□□□□□ -1.73
PTPRB-206ENST00000548122 BSNQ9UPA5 3926 aa4.23□□□□□ -1.73
PTPRB-206ENST00000548122 TMSB15BA0A087X1C1 80 aa4.23□□□□□ -1.73
PTPRB-206ENST00000548122 IGHV1-24A0A0C4DH33 117 aa4.23□□□□□ -1.73
PTPRB-206ENST00000548122 LINC01620Q4KN68 170 aa4.23□□□□□ -1.73
PTPRB-206ENST00000548122 TMEM78Q5T7P6 136 aa4.23□□□□□ -1.73
PTPRB-206ENST00000548122 TMEM14EPQ6UXP3 125 aa4.23□□□□□ -1.73
PTPRB-206ENST00000548122 SLC50A1Q9BRV3 221 aa4.23□□□□□ -1.73
PTPRB-206ENST00000548122 A0A087WX48 190 aa4.23□□□□□ -1.73
PTPRB-206ENST00000548122 HIGD1CA8MV81 97 aa4.23□□□□□ -1.73
PTPRB-206ENST00000548122 NDUFA4O00483 81 aa4.23□□□□□ -1.73
PTPRB-206ENST00000548122 PRYO14603 147 aa4.23□□□□□ -1.73
PTPRB-206ENST00000548122 RPL18AQ02543 176 aaKnown RBP4.23□□□□□ -1.73
PTPRB-206ENST00000548122 BVES-AS1Q5T3Y7 98 aa4.23□□□□□ -1.73
PTPRB-206ENST00000548122 SCXQ7RTU7 201 aa4.23□□□□□ -1.73
PTPRB-206ENST00000548122 AMN1Q8IY45 258 aa4.23□□□□□ -1.73
PTPRB-206ENST00000548122 TMEM14BQ9NUH8 114 aa4.23□□□□□ -1.73
PTPRB-206ENST00000548122 NBEAL1Q6ZS30 2694 aa4.23□□□□□ -1.73
PTPRB-206ENST00000548122 TEN1Q86WV5 123 aa4.22□□□□□ -1.73
PTPRB-206ENST00000548122 PPDPFQ9H3Y8 114 aa4.22□□□□□ -1.73
PTPRB-206ENST00000548122 ZNF688P0C7X2 276 aa4.22□□□□□ -1.73
PTPRB-206ENST00000548122 CFHR3Q02985 330 aa4.22□□□□□ -1.73
PTPRB-206ENST00000548122 Q6AWC8 147 aa4.22□□□□□ -1.73
PTPRB-206ENST00000548122 MIR17HGQ75NE6 70 aa4.22□□□□□ -1.73
PTPRB-206ENST00000548122 SLC25A29Q8N8R3 303 aa4.22□□□□□ -1.73
PTPRB-206ENST00000548122 SYS1-DBNDD2H3BUS1 97 aa4.22□□□□□ -1.73
PTPRB-206ENST00000548122 LGALS9O00182 355 aa4.22□□□□□ -1.73
PTPRB-206ENST00000548122 NCR2O95944 276 aa4.22□□□□□ -1.73
PTPRB-206ENST00000548122 TRBV12-3P01733 135 aa4.22□□□□□ -1.73
PTPRB-206ENST00000548122 NHLRC4P0CG21 123 aaPredicted RBP4.22□□□□□ -1.73
PTPRB-206ENST00000548122 GATA2P23769 480 aaPredicted RBP4.22□□□□□ -1.73
PTPRB-206ENST00000548122 TRGV9Q99603 122 aa4.22□□□□□ -1.73
PTPRB-206ENST00000548122 RNASE2P10153 161 aaKnown RBP4.22□□□□□ -1.73
PTPRB-206ENST00000548122 PSMG4Q5JS54 123 aa4.22□□□□□ -1.73
PTPRB-206ENST00000548122 LINC00482Q8N8I6 264 aa4.22□□□□□ -1.73
PTPRB-206ENST00000548122 C18orf32Q8TCD1 76 aa4.22□□□□□ -1.73
PTPRB-206ENST00000548122 HRNRQ86YZ3 2850 aaPredicted RBP4.21□□□□□ -1.73
PTPRB-206ENST00000548122 C2orf70A6NJV1 201 aa4.21□□□□□ -1.74
PTPRB-206ENST00000548122 ATOX1O00244 68 aa4.21□□□□□ -1.74
PTPRB-206ENST00000548122 COX7A2LO14548 114 aa4.21□□□□□ -1.74
PTPRB-206ENST00000548122 DEFB131AP59861 70 aa4.21□□□□□ -1.74
PTPRB-206ENST00000548122 TM2D2Q9BX73 214 aa4.21□□□□□ -1.74
PTPRB-206ENST00000548122 JPT2Q9H910 190 aa4.21□□□□□ -1.74
PTPRB-206ENST00000548122 PDZD2O15018 2839 aa4.21□□□□□ -1.74
PTPRB-206ENST00000548122 ZANQ9Y493 2812 aa4.21□□□□□ -1.74
PTPRB-206ENST00000548122 IGLV11-55A0A075B6I3 123 aa4.21□□□□□ -1.74
PTPRB-206ENST00000548122 IGLV1-40P01703 118 aa4.21□□□□□ -1.74
PTPRB-206ENST00000548122 ZNF414Q96IQ9 312 aa4.21□□□□□ -1.74
PTPRB-206ENST00000548122 C9orf85Q96MD7 179 aa4.21□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms