RNA–Protein interactions for RNA: ENST00000547672.5

PTCH1-215, Transcript of patched 1, humanhuman

TSL 1 (best)

Gene PTCH1, Length 881 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-215ENST00000547672 I3L3M4 83 aa9.72□□□□□ -0.85
PTCH1-215ENST00000547672 IGHV3-53P01767 116 aa9.72□□□□□ -0.85
PTCH1-215ENST00000547672 LGALS9CQ6DKI2 356 aa9.72□□□□□ -0.85
PTCH1-215ENST00000547672 WFDC10AQ9H1F0 79 aa9.72□□□□□ -0.85
PTCH1-215ENST00000547672 A0A096LNJ9 63 aa9.71□□□□□ -0.86
PTCH1-215ENST00000547672 TRBV10-1A0A0K0K1A3 114 aa9.71□□□□□ -0.86
PTCH1-215ENST00000547672 PRSS1P07477 247 aa9.71□□□□□ -0.86
PTCH1-215ENST00000547672 LINC01545Q5VT33 79 aa9.71□□□□□ -0.86
PTCH1-215ENST00000547672 UFSP1Q6NVU6 142 aa9.71□□□□□ -0.86
PTCH1-215ENST00000547672 TOMM6Q96B49 74 aa9.71□□□□□ -0.86
PTCH1-215ENST00000547672 SCGB3A1Q96QR1 104 aa9.71□□□□□ -0.86
PTCH1-215ENST00000547672 MRPL16Q9NX20 251 aaKnown RBP9.71□□□□□ -0.86
PTCH1-215ENST00000547672 CYSLTR1Q9Y271 337 aa9.71□□□□□ -0.86
PTCH1-215ENST00000547672 NIPBLQ6KC79 2804 aaeCLIP9.71□□□□□ -0.86
PTCH1-215ENST00000547672 Q6ZN92 141 aa9.7□□□□□ -0.86
PTCH1-215ENST00000547672 ZNF664Q8N3J9 261 aa9.7□□□□□ -0.86
PTCH1-215ENST00000547672 Q8N976 141 aa9.7□□□□□ -0.86
PTCH1-215ENST00000547672 TMEM141Q96I45 108 aa9.7□□□□□ -0.86
PTCH1-215ENST00000547672 NOP10Q9NPE3 64 aaKnown RBP9.7□□□□□ -0.86
PTCH1-215ENST00000547672 TRGV2A0A075B6R0 118 aa9.69□□□□□ -0.86
PTCH1-215ENST00000547672 SMAGPQ0VAQ4 97 aa9.69□□□□□ -0.86
PTCH1-215ENST00000547672 PAPPA-AS1Q5QFB9 102 aa9.69□□□□□ -0.86
PTCH1-215ENST00000547672 ERASQ7Z444 233 aa9.69□□□□□ -0.86
PTCH1-215ENST00000547672 PRIMA1Q86XR5 153 aa9.69□□□□□ -0.86
PTCH1-215ENST00000547672 C2orf66Q6UXQ4 117 aa9.68□□□□□ -0.86
PTCH1-215ENST00000547672 LINC00173Q6ZV60 143 aa9.68□□□□□ -0.86
PTCH1-215ENST00000547672 JMJD1CQ15652 2540 aa9.68□□□□□ -0.86
PTCH1-215ENST00000547672 TRAV12-1A0A0B4J245 112 aa9.67□□□□□ -0.86
PTCH1-215ENST00000547672 LYRM9A8MSI8 78 aa9.67□□□□□ -0.86
PTCH1-215ENST00000547672 A8MZ25 164 aa9.67□□□□□ -0.86
PTCH1-215ENST00000547672 PRM2P04554 102 aa9.67□□□□□ -0.86
PTCH1-215ENST00000547672 NPSP0C0P6 89 aa9.67□□□□□ -0.86
PTCH1-215ENST00000547672 RPL36AP83881 106 aaKnown RBP9.67□□□□□ -0.86
PTCH1-215ENST00000547672 EGFEM1PQ0D2K5 195 aa9.67□□□□□ -0.86
PTCH1-215ENST00000547672 SPATA45Q537H7 98 aa9.67□□□□□ -0.86
PTCH1-215ENST00000547672 CDPF1Q6NVV7 123 aa9.67□□□□□ -0.86
PTCH1-215ENST00000547672 RPL36ALQ969Q0 106 aaKnown RBP9.67□□□□□ -0.86
PTCH1-215ENST00000547672 C18orf15Q96N68 181 aa9.67□□□□□ -0.86
PTCH1-215ENST00000547672 ATRQ13535 2644 aa9.66□□□□□ -0.86
PTCH1-215ENST00000547672 IGHV3-73A0A0B4J1V6 119 aa9.66□□□□□ -0.86
PTCH1-215ENST00000547672 H0Y8G0 127 aa9.66□□□□□ -0.86
PTCH1-215ENST00000547672 MIFP14174 115 aa9.66□□□□□ -0.86
PTCH1-215ENST00000547672 Q6ZTI0 123 aa9.66□□□□□ -0.86
PTCH1-215ENST00000547672 MIEN1Q9BRT3 115 aa9.66□□□□□ -0.86
PTCH1-215ENST00000547672 PAM16Q9Y3D7 125 aa9.66□□□□□ -0.86
PTCH1-215ENST00000547672 TEX48A0A1B0GUV7 120 aa9.65□□□□□ -0.86
PTCH1-215ENST00000547672 TRBV6-4A0A1B0GX49 114 aa9.65□□□□□ -0.86
PTCH1-215ENST00000547672 PLNP26678 52 aa9.65□□□□□ -0.86
PTCH1-215ENST00000547672 DDTP30046 118 aa9.65□□□□□ -0.86
PTCH1-215ENST00000547672 DAZ4Q86SG3 579 aaKnown RBP9.65□□□□□ -0.86
PTCH1-215ENST00000547672 TIMM17AQ99595 171 aa9.65□□□□□ -0.86
PTCH1-215ENST00000547672 PRADC1Q9BSG0 188 aa9.65□□□□□ -0.86
PTCH1-215ENST00000547672 PRO1933Q9H354 126 aa9.65□□□□□ -0.86
PTCH1-215ENST00000547672 ZMAT4Q9H898 229 aa9.65□□□□□ -0.86
PTCH1-215ENST00000547672 DAZ3Q9NR90 486 aaKnown RBP9.65□□□□□ -0.86
PTCH1-215ENST00000547672 CUBNO60494 3623 aa9.65□□□□□ -0.86
PTCH1-215ENST00000547672 TRBV7-3A0A075B6L6 115 aa9.64□□□□□ -0.87
PTCH1-215ENST00000547672 A0A087WX48 190 aa9.64□□□□□ -0.87
PTCH1-215ENST00000547672 TRGV4A0A0C4DH28 118 aa9.64□□□□□ -0.87
PTCH1-215ENST00000547672 GAGE12BA1L429 117 aa9.64□□□□□ -0.87
PTCH1-215ENST00000547672 PLAC8L1A1L4L8 177 aa9.64□□□□□ -0.87
PTCH1-215ENST00000547672 K7EQD1 137 aa9.64□□□□□ -0.87
PTCH1-215ENST00000547672 GAGE7O76087 117 aa9.64□□□□□ -0.87
PTCH1-215ENST00000547672 DPM2O94777 84 aa9.64□□□□□ -0.87
PTCH1-215ENST00000547672 GAGE12FP0CL80 117 aa9.64□□□□□ -0.87
PTCH1-215ENST00000547672 GAGE12GP0CL81 117 aa9.64□□□□□ -0.87
PTCH1-215ENST00000547672 GAGE12IP0CL82 117 aa9.64□□□□□ -0.87
PTCH1-215ENST00000547672 IGHV4-30-4P0DP06 118 aa9.64□□□□□ -0.87
PTCH1-215ENST00000547672 COTL1Q14019 142 aa9.64□□□□□ -0.87
PTCH1-215ENST00000547672 SPATA3Q8NHX4 192 aa9.64□□□□□ -0.87
PTCH1-215ENST00000547672 PMCHL2Q9BQD1 86 aa9.64□□□□□ -0.87
PTCH1-215ENST00000547672 UQCR10Q9UDW1 63 aa9.64□□□□□ -0.87
PTCH1-215ENST00000547672 CRYBA4P53673 196 aa9.63□□□□□ -0.87
PTCH1-215ENST00000547672 DEFA6Q01524 100 aa9.63□□□□□ -0.87
PTCH1-215ENST00000547672 TMEM97Q5BJF2 176 aa9.63□□□□□ -0.87
PTCH1-215ENST00000547672 NEXN-AS1Q8NBZ9 246 aa9.63□□□□□ -0.87
PTCH1-215ENST00000547672 OR11H2Q8NH07 326 aa9.63□□□□□ -0.87
PTCH1-215ENST00000547672 RNF183Q96D59 192 aa9.63□□□□□ -0.87
PTCH1-215ENST00000547672 TP53TG1Q9Y2A0 90 aa9.63□□□□□ -0.87
PTCH1-215ENST00000547672 TSHBP01222 138 aa9.62□□□□□ -0.87
PTCH1-215ENST00000547672 IGKCP01834 107 aa9.62□□□□□ -0.87
PTCH1-215ENST00000547672 OXLD1Q5BKU9 147 aa9.62□□□□□ -0.87
PTCH1-215ENST00000547672 LINC00612Q8N6U2 182 aa9.62□□□□□ -0.87
PTCH1-215ENST00000547672 C20orf203Q8NBC4 194 aa9.62□□□□□ -0.87
PTCH1-215ENST00000547672 ZNF479Q96JC4 524 aa9.62□□□□□ -0.87
PTCH1-215ENST00000547672 PYGO1Q9Y3Y4 419 aa9.62□□□□□ -0.87
PTCH1-215ENST00000547672 X6R8D5 127 aa9.62□□□□□ -0.87
PTCH1-215ENST00000547672 ODF1Q14990 250 aa9.61□□□□□ -0.87
PTCH1-215ENST00000547672 MRPL52Q86TS9 123 aaKnown RBP9.61□□□□□ -0.87
PTCH1-215ENST00000547672 ATOH7Q8N100 152 aa9.61□□□□□ -0.87
PTCH1-215ENST00000547672 IGIPA6NJ69 53 aa9.6□□□□□ -0.87
PTCH1-215ENST00000547672 F8VRH5 84 aa9.6□□□□□ -0.87
PTCH1-215ENST00000547672 IGLC3P0DOY3 106 aa9.6□□□□□ -0.87
PTCH1-215ENST00000547672 EMP1P54849 157 aa9.6□□□□□ -0.87
PTCH1-215ENST00000547672 PMVKQ15126 192 aa9.6□□□□□ -0.87
PTCH1-215ENST00000547672 DEFB135Q30KP9 77 aa9.6□□□□□ -0.87
PTCH1-215ENST00000547672 Q6ZSN1 163 aa9.6□□□□□ -0.87
PTCH1-215ENST00000547672 NEGR1Q7Z3B1 354 aa9.6□□□□□ -0.87
PTCH1-215ENST00000547672 ZNRF2Q8NHG8 242 aa9.6□□□□□ -0.87
PTCH1-215ENST00000547672 SPANXA1Q9NS26 97 aa9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms