RNA–Protein interactions for RNA: ENST00000547204.5

ARFGAP1-220, Transcript of ADP ribosylation factor GTPase activating protein 1, humanhuman

TSL 2 BASIC

Gene ARFGAP1, Length 1,327 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARFGAP1-220ENST00000547204 Q6ZSN1 163 aa11.96□□□□□ -0.49
ARFGAP1-220ENST00000547204 MAP1LC3AQ9H492 121 aa11.96□□□□□ -0.49
ARFGAP1-220ENST00000547204 DNAH7Q8WXX0 4024 aa11.95□□□□□ -0.5
ARFGAP1-220ENST00000547204 TRGV4A0A0C4DH28 118 aa11.95□□□□□ -0.5
ARFGAP1-220ENST00000547204 A0A0J9YWU9 116 aa11.95□□□□□ -0.5
ARFGAP1-220ENST00000547204 COA6Q5JTJ3 125 aaKnown RBP11.95□□□□□ -0.5
ARFGAP1-220ENST00000547204 C20orf78Q9BR46 151 aa11.95□□□□□ -0.5
ARFGAP1-220ENST00000547204 FHL2Q14192 279 aa11.94□□□□□ -0.5
ARFGAP1-220ENST00000547204 ST20Q9HBF5 79 aa11.94□□□□□ -0.5
ARFGAP1-220ENST00000547204 NIT2Q9NQR4 276 aa11.94□□□□□ -0.5
ARFGAP1-220ENST00000547204 TRBV6-5A0A0K0K1A5 114 aa11.93□□□□□ -0.5
ARFGAP1-220ENST00000547204 LOC389332A0A1B0GUA5 103 aa11.93□□□□□ -0.5
ARFGAP1-220ENST00000547204 PRSS47A8MTI9 375 aa11.93□□□□□ -0.5
ARFGAP1-220ENST00000547204 K7EQD1 137 aa11.93□□□□□ -0.5
ARFGAP1-220ENST00000547204 SUMO2P61956 95 aaKnown RBP11.93□□□□□ -0.5
ARFGAP1-220ENST00000547204 SERF1AO75920 110 aa11.92□□□□□ -0.5
ARFGAP1-220ENST00000547204 ATP5G1P05496 136 aa11.92□□□□□ -0.5
ARFGAP1-220ENST00000547204 P0DMU3 169 aa11.92□□□□□ -0.5
ARFGAP1-220ENST00000547204 FAM231AP0DMU4 169 aa11.92□□□□□ -0.5
ARFGAP1-220ENST00000547204 FAM231CP0DMU5 169 aa11.92□□□□□ -0.5
ARFGAP1-220ENST00000547204 PRSS3P2Q8NHM4 247 aa11.92□□□□□ -0.5
ARFGAP1-220ENST00000547204 TRBV10-1A0A0K0K1A3 114 aa11.91□□□□□ -0.5
ARFGAP1-220ENST00000547204 TRBV6-4A0A1B0GX49 114 aa11.91□□□□□ -0.5
ARFGAP1-220ENST00000547204 PMCHP20382 165 aa11.91□□□□□ -0.5
ARFGAP1-220ENST00000547204 IFI27P40305 119 aaPredicted RBP11.91□□□□□ -0.5
ARFGAP1-220ENST00000547204 LINC00310P59036 64 aa11.91□□□□□ -0.5
ARFGAP1-220ENST00000547204 SNRPEP62304 92 aaKnown RBP11.91□□□□□ -0.5
ARFGAP1-220ENST00000547204 C12orf74Q32Q52 190 aa11.91□□□□□ -0.5
ARFGAP1-220ENST00000547204 RNASEKQ6P5S7 137 aaKnown RBP11.91□□□□□ -0.5
ARFGAP1-220ENST00000547204 NIT1Q86X76 327 aa11.91□□□□□ -0.5
ARFGAP1-220ENST00000547204 SLC25A29Q8N8R3 303 aa11.91□□□□□ -0.5
ARFGAP1-220ENST00000547204 DNAJC30Q96LL9 226 aa11.91□□□□□ -0.5
ARFGAP1-220ENST00000547204 SMIM2Q9BVW6 85 aa11.91□□□□□ -0.5
ARFGAP1-220ENST00000547204 NXT2Q9NPJ8 142 aaKnown RBP11.91□□□□□ -0.5
ARFGAP1-220ENST00000547204 C5orf52A6NGY3 159 aa11.9□□□□□ -0.5
ARFGAP1-220ENST00000547204 C3orf84H3BNL1 204 aa11.9□□□□□ -0.5
ARFGAP1-220ENST00000547204 HOXA5P20719 270 aa11.9□□□□□ -0.5
ARFGAP1-220ENST00000547204 RPL32P62910 135 aaKnown RBP11.9□□□□□ -0.5
ARFGAP1-220ENST00000547204 FA2HQ7L5A8 372 aa11.9□□□□□ -0.5
ARFGAP1-220ENST00000547204 Q8N8P6 123 aa11.9□□□□□ -0.5
ARFGAP1-220ENST00000547204 NEXN-AS1Q8NBZ9 246 aa11.9□□□□□ -0.5
ARFGAP1-220ENST00000547204 URB1-AS1Q96HZ7 61 aa11.9□□□□□ -0.5
ARFGAP1-220ENST00000547204 TNFRSF18Q9Y5U5 241 aa11.9□□□□□ -0.5
ARFGAP1-220ENST00000547204 SDHAF1A6NFY7 115 aa11.89□□□□□ -0.51
ARFGAP1-220ENST00000547204 LINC00614P0C842 121 aa11.89□□□□□ -0.51
ARFGAP1-220ENST00000547204 RHOHQ15669 191 aa11.89□□□□□ -0.51
ARFGAP1-220ENST00000547204 C11orf45Q8TAV5 145 aa11.89□□□□□ -0.51
ARFGAP1-220ENST00000547204 CHCHD1Q96BP2 118 aaKnown RBP11.89□□□□□ -0.51
ARFGAP1-220ENST00000547204 TMEM70Q9BUB7 260 aa11.89□□□□□ -0.51
ARFGAP1-220ENST00000547204 HHLA3Q9XRX5 114 aa11.89□□□□□ -0.51
ARFGAP1-220ENST00000547204 IGLV2-18A0A075B6J9 118 aa11.88□□□□□ -0.51
ARFGAP1-220ENST00000547204 ESDP10768 282 aa11.88□□□□□ -0.51
ARFGAP1-220ENST00000547204 POLR2KP53803 58 aaKnown RBP11.88□□□□□ -0.51
ARFGAP1-220ENST00000547204 MUC7Q8TAX7 377 aa11.88□□□□□ -0.51
ARFGAP1-220ENST00000547204 PRADC1Q9BSG0 188 aa11.88□□□□□ -0.51
ARFGAP1-220ENST00000547204 Q9UF83 564 aa11.88□□□□□ -0.51
ARFGAP1-220ENST00000547204 PRO0255Q9UI72 69 aa11.88□□□□□ -0.51
ARFGAP1-220ENST00000547204 VCYO14598 125 aa11.87□□□□□ -0.51
ARFGAP1-220ENST00000547204 NUPR1O60356 82 aa11.87□□□□□ -0.51
ARFGAP1-220ENST00000547204 CRYBA4P53673 196 aa11.87□□□□□ -0.51
ARFGAP1-220ENST00000547204 RPL36AP83881 106 aaKnown RBP11.87□□□□□ -0.51
ARFGAP1-220ENST00000547204 RPL36ALQ969Q0 106 aaKnown RBP11.87□□□□□ -0.51
ARFGAP1-220ENST00000547204 AP5S1Q9NUS5 200 aa11.87□□□□□ -0.51
ARFGAP1-220ENST00000547204 TRBV27A0A0K0K1C4 114 aa11.86□□□□□ -0.51
ARFGAP1-220ENST00000547204 LINC01546A6NGU7 62 aa11.86□□□□□ -0.51
ARFGAP1-220ENST00000547204 F5H768 121 aa11.86□□□□□ -0.51
ARFGAP1-220ENST00000547204 HSBP1O75506 76 aa11.86□□□□□ -0.51
ARFGAP1-220ENST00000547204 HTN3P15516 51 aa11.86□□□□□ -0.51
ARFGAP1-220ENST00000547204 HIST3H2BBQ8N257 126 aa11.86□□□□□ -0.51
ARFGAP1-220ENST00000547204 TRBV7-3A0A075B6L6 115 aa11.86□□□□□ -0.51
ARFGAP1-220ENST00000547204 NANOS2P60321 138 aaKnown RBP11.86□□□□□ -0.51
ARFGAP1-220ENST00000547204 PDZD11Q5EBL8 140 aa11.86□□□□□ -0.51
ARFGAP1-220ENST00000547204 Q6ZTC4 211 aa11.86□□□□□ -0.51
ARFGAP1-220ENST00000547204 NEGR1Q7Z3B1 354 aa11.86□□□□□ -0.51
ARFGAP1-220ENST00000547204 ZNRF2Q8NHG8 242 aa11.86□□□□□ -0.51
ARFGAP1-220ENST00000547204 GAGE12JA6NER3 117 aa11.85□□□□□ -0.51
ARFGAP1-220ENST00000547204 I3L3M4 83 aa11.85□□□□□ -0.51
ARFGAP1-220ENST00000547204 K7EMI3 77 aa11.85□□□□□ -0.51
ARFGAP1-220ENST00000547204 PAX4O43316 350 aa11.85□□□□□ -0.51
ARFGAP1-220ENST00000547204 GAGE1Q13065 139 aa11.85□□□□□ -0.51
ARFGAP1-220ENST00000547204 GAGE4Q13068 117 aa11.85□□□□□ -0.51
ARFGAP1-220ENST00000547204 GAGE5Q13069 117 aa11.85□□□□□ -0.51
ARFGAP1-220ENST00000547204 GAGE13Q4V321 117 aa11.85□□□□□ -0.51
ARFGAP1-220ENST00000547204 KIR2DL4Q99706 377 aa11.85□□□□□ -0.51
ARFGAP1-220ENST00000547204 LOC100131303A0A0U1RQF7 123 aa11.84□□□□□ -0.51
ARFGAP1-220ENST00000547204 TCAPO15273 167 aa11.84□□□□□ -0.51
ARFGAP1-220ENST00000547204 S100A2P29034 98 aa11.84□□□□□ -0.51
ARFGAP1-220ENST00000547204 UBE2D3P61077 147 aa11.84□□□□□ -0.51
ARFGAP1-220ENST00000547204 UBE2D2P62837 147 aa11.84□□□□□ -0.51
ARFGAP1-220ENST00000547204 CASC10Q5T4H9 136 aa11.84□□□□□ -0.51
ARFGAP1-220ENST00000547204 STARD9Q9P2P6 4700 aa11.83□□□□□ -0.52
ARFGAP1-220ENST00000547204 LINC00694P0DN24 101 aa11.83□□□□□ -0.52
ARFGAP1-220ENST00000547204 GYPEP15421 78 aa11.83□□□□□ -0.52
ARFGAP1-220ENST00000547204 LAGE3Q14657 143 aa11.83□□□□□ -0.52
ARFGAP1-220ENST00000547204 VSIG2Q96IQ7 327 aa11.83□□□□□ -0.52
ARFGAP1-220ENST00000547204 TRAV26-1A0A087WT03 109 aa11.82□□□□□ -0.52
ARFGAP1-220ENST00000547204 IGHV1-24A0A0C4DH33 117 aa11.82□□□□□ -0.52
ARFGAP1-220ENST00000547204 A0A0J9YY99 117 aa11.82□□□□□ -0.52
ARFGAP1-220ENST00000547204 FCER1GP30273 86 aa11.82□□□□□ -0.52
ARFGAP1-220ENST00000547204 AMTP48728 403 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 65.5 ms