RNA–Protein interactions for RNA: ENST00000547018.5

SCAF11-209, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 5

Gene SCAF11, Length 3,271 nt, Biotype non stop decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-209ENST00000547018 CEMP1Q6PRD7 247 aaPredicted RBP9.37□□□□□ -0.91
SCAF11-209ENST00000547018 C4orf3Q8WVX3 66 aa9.37□□□□□ -0.91
SCAF11-209ENST00000547018 FAM19A4Q96LR4 140 aa9.37□□□□□ -0.91
SCAF11-209ENST00000547018 BVES-AS1Q5T3Y7 98 aa9.37□□□□□ -0.91
SCAF11-209ENST00000547018 ZNF580Q9UK33 172 aa9.37□□□□□ -0.91
SCAF11-209ENST00000547018 NBEAL1Q6ZS30 2694 aa9.37□□□□□ -0.91
SCAF11-209ENST00000547018 PRSS29PA6NIE9 313 aa9.37□□□□□ -0.91
SCAF11-209ENST00000547018 ZNF418Q8TF45 676 aaPredicted RBP9.37□□□□□ -0.91
SCAF11-209ENST00000547018 LGALS9O00182 355 aa9.36□□□□□ -0.91
SCAF11-209ENST00000547018 AZU1P20160 251 aa9.36□□□□□ -0.91
SCAF11-209ENST00000547018 SFTA2Q6UW10 78 aa9.36□□□□□ -0.91
SCAF11-209ENST00000547018 TMEM170BQ5T4T1 132 aa9.36□□□□□ -0.91
SCAF11-209ENST00000547018 COL6A5A8TX70 2615 aa9.36□□□□□ -0.91
SCAF11-209ENST00000547018 TMEM89A2RUT3 159 aa9.36□□□□□ -0.91
SCAF11-209ENST00000547018 TMEM97Q5BJF2 176 aa9.36□□□□□ -0.91
SCAF11-209ENST00000547018 AMTNQ6UX39 209 aa9.36□□□□□ -0.91
SCAF11-209ENST00000547018 C2orf91Q6ZV80 131 aa9.36□□□□□ -0.91
SCAF11-209ENST00000547018 TRRAPQ9Y4A5 3859 aa9.35□□□□□ -0.91
SCAF11-209ENST00000547018 TRGV1A0A0A0MS02 117 aa9.35□□□□□ -0.91
SCAF11-209ENST00000547018 INAFM1C9JVW0 142 aa9.35□□□□□ -0.91
SCAF11-209ENST00000547018 ORMDL2Q53FV1 153 aa9.35□□□□□ -0.91
SCAF11-209ENST00000547018 IGHV4-4A0A075B6R2 117 aa9.35□□□□□ -0.91
SCAF11-209ENST00000547018 SPAG8Q99932 426 aaPredicted RBP9.35□□□□□ -0.91
SCAF11-209ENST00000547018 OR11H12B2RN74 326 aa9.34□□□□□ -0.91
SCAF11-209ENST00000547018 K7ERJ3 54 aa9.34□□□□□ -0.91
SCAF11-209ENST00000547018 LINC00315P59091 139 aa9.34□□□□□ -0.91
SCAF11-209ENST00000547018 C12orf54Q6X4T0 127 aa9.34□□□□□ -0.91
SCAF11-209ENST00000547018 CYSLTR1Q9Y271 337 aa9.34□□□□□ -0.91
SCAF11-209ENST00000547018 CRYGDP07320 174 aa9.34□□□□□ -0.91
SCAF11-209ENST00000547018 KRTAP1-1Q07627 177 aa9.34□□□□□ -0.91
SCAF11-209ENST00000547018 ODF3L2Q3SX64 289 aa9.34□□□□□ -0.91
SCAF11-209ENST00000547018 MAPKAPK5-AS1Q8N8E1 139 aa9.34□□□□□ -0.91
SCAF11-209ENST00000547018 HLA-DRB4P13762 266 aa9.34□□□□□ -0.91
SCAF11-209ENST00000547018 AMMECR1LQ6DCA0 310 aa9.34□□□□□ -0.91
SCAF11-209ENST00000547018 ZFP2Q6ZN57 461 aa9.34□□□□□ -0.91
SCAF11-209ENST00000547018 HHLA3Q9XRX5 114 aa9.34□□□□□ -0.91
SCAF11-209ENST00000547018 HLA-DRB4X5D2U9 266 aa9.34□□□□□ -0.91
SCAF11-209ENST00000547018 LY6G6DO95868 133 aa9.33□□□□□ -0.92
SCAF11-209ENST00000547018 PF4P02776 101 aa9.33□□□□□ -0.92
SCAF11-209ENST00000547018 SAMD13Q5VXD3 122 aa9.33□□□□□ -0.92
SCAF11-209ENST00000547018 SCGB1D4Q6XE38 83 aa9.33□□□□□ -0.92
SCAF11-209ENST00000547018 Q6ZSN1 163 aa9.33□□□□□ -0.92
SCAF11-209ENST00000547018 KIF25-AS1Q9Y6Z4 181 aa9.33□□□□□ -0.92
SCAF11-209ENST00000547018 BAALCQ8WXS3 180 aa9.32□□□□□ -0.92
SCAF11-209ENST00000547018 H3BUT2 72 aa9.32□□□□□ -0.92
SCAF11-209ENST00000547018 VCYO14598 125 aa9.32□□□□□ -0.92
SCAF11-209ENST00000547018 TRGV11A0A075B6L2 103 aa9.32□□□□□ -0.92
SCAF11-209ENST00000547018 A0A087WX48 190 aa9.32□□□□□ -0.92
SCAF11-209ENST00000547018 TNFRSF18Q9Y5U5 241 aa9.32□□□□□ -0.92
SCAF11-209ENST00000547018 FGF6P10767 208 aa9.31□□□□□ -0.92
SCAF11-209ENST00000547018 C20orf78Q9BR46 151 aa9.31□□□□□ -0.92
SCAF11-209ENST00000547018 NHP2Q9NX24 153 aaKnown RBP9.31□□□□□ -0.92
SCAF11-209ENST00000547018 COX11Q9Y6N1 276 aa9.31□□□□□ -0.92
SCAF11-209ENST00000547018 FBN1P35555 2871 aaKnown RBP9.31□□□□□ -0.92
SCAF11-209ENST00000547018 H7C1H1 209 aa9.31□□□□□ -0.92
SCAF11-209ENST00000547018 M0QY20 66 aa9.31□□□□□ -0.92
SCAF11-209ENST00000547018 OR4C5Q8NGB2 326 aa9.31□□□□□ -0.92
SCAF11-209ENST00000547018 OR11H2Q8NH07 326 aa9.31□□□□□ -0.92
SCAF11-209ENST00000547018 ANK3Q12955 4377 aaKnown RBP9.3□□□□□ -0.92
SCAF11-209ENST00000547018 ADARB2-AS1A8MUL3 147 aa9.3□□□□□ -0.92
SCAF11-209ENST00000547018 C9orf85Q96MD7 179 aa9.3□□□□□ -0.92
SCAF11-209ENST00000547018 HIST1H4GQ99525 98 aa9.3□□□□□ -0.92
SCAF11-209ENST00000547018 TSSC4Q9Y5U2 329 aaPredicted RBP9.3□□□□□ -0.92
SCAF11-209ENST00000547018 TRBV25-1A0A075B6N4 114 aa9.3□□□□□ -0.92
SCAF11-209ENST00000547018 IGKV2D-29A0A075B6S2 120 aaPredicted RBP9.3□□□□□ -0.92
SCAF11-209ENST00000547018 IGKV2-29A2NJV5 120 aaPredicted RBP9.3□□□□□ -0.92
SCAF11-209ENST00000547018 F8VRH5 84 aa9.3□□□□□ -0.92
SCAF11-209ENST00000547018 INSP01308 110 aa9.3□□□□□ -0.92
SCAF11-209ENST00000547018 MORN3Q6PF18 240 aaPredicted RBP9.3□□□□□ -0.92
SCAF11-209ENST00000547018 BOD1L2Q8IYS8 172 aa9.3□□□□□ -0.92
SCAF11-209ENST00000547018 Q8N2B8 174 aa9.3□□□□□ -0.92
SCAF11-209ENST00000547018 IGKV3OR2-268A0A0C4DH90 116 aa9.29□□□□□ -0.92
SCAF11-209ENST00000547018 TAX1BP3O14907 124 aa9.29□□□□□ -0.92
SCAF11-209ENST00000547018 FXYD2P54710 66 aa9.29□□□□□ -0.92
SCAF11-209ENST00000547018 RNF152Q8N8N0 203 aa9.29□□□□□ -0.92
SCAF11-209ENST00000547018 TOMM6Q96B49 74 aa9.29□□□□□ -0.92
SCAF11-209ENST00000547018 CHAC1Q9BUX1 264 aa9.29□□□□□ -0.92
SCAF11-209ENST00000547018 NOP10Q9NPE3 64 aaKnown RBP9.29□□□□□ -0.92
SCAF11-209ENST00000547018 C11orf86A6NJI1 115 aa9.29□□□□□ -0.92
SCAF11-209ENST00000547018 ORAOV1Q8WV07 137 aa9.29□□□□□ -0.92
SCAF11-209ENST00000547018 Q6ZTI0 123 aa9.29□□□□□ -0.92
SCAF11-209ENST00000547018 PRADC1Q9BSG0 188 aa9.29□□□□□ -0.92
SCAF11-209ENST00000547018 TRBV7-9A0A0J9YWB2 115 aa9.28□□□□□ -0.92
SCAF11-209ENST00000547018 GAGE12BA1L429 117 aa9.28□□□□□ -0.92
SCAF11-209ENST00000547018 ZNF815PA8K554 130 aa9.28□□□□□ -0.92
SCAF11-209ENST00000547018 GAGE7O76087 117 aa9.28□□□□□ -0.92
SCAF11-209ENST00000547018 GAGE12FP0CL80 117 aa9.28□□□□□ -0.92
SCAF11-209ENST00000547018 GAGE12GP0CL81 117 aa9.28□□□□□ -0.92
SCAF11-209ENST00000547018 GAGE12IP0CL82 117 aa9.28□□□□□ -0.92
SCAF11-209ENST00000547018 POLR2KP53803 58 aaKnown RBP9.28□□□□□ -0.92
SCAF11-209ENST00000547018 SRSF9Q13242 221 aaKnown RBP eCLIP9.28□□□□□ -0.92
SCAF11-209ENST00000547018 ZNF415Q09FC8 603 aa9.27□□□□□ -0.92
SCAF11-209ENST00000547018 DEFB125Q8N687 156 aa9.27□□□□□ -0.92
SCAF11-209ENST00000547018 SPATA3Q8NHX4 192 aa9.27□□□□□ -0.92
SCAF11-209ENST00000547018 TRGV2A0A075B6R0 118 aa9.27□□□□□ -0.93
SCAF11-209ENST00000547018 DEFB4AO15263 64 aa9.27□□□□□ -0.93
SCAF11-209ENST00000547018 TSHBP01222 138 aa9.27□□□□□ -0.93
SCAF11-209ENST00000547018 ZNRF2Q8NHG8 242 aa9.27□□□□□ -0.93
SCAF11-209ENST00000547018 PPP1R17O96001 155 aa9.27□□□□□ -0.93
SCAF11-209ENST00000547018 TRPT1Q86TN4 253 aaKnown RBP9.27□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms