RNA–Protein interactions for RNA: ENST00000546997.1

BRF1-208, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 2

Gene BRF1, Length 1,999 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-208ENST00000546997 GLMPQ8WWB7 406 aa12.34□□□□□ -0.43
BRF1-208ENST00000546997 WFDC12Q8WWY7 111 aa12.34□□□□□ -0.43
BRF1-208ENST00000546997 DAZ1Q9NQZ3 744 aaKnown RBP12.34□□□□□ -0.43
BRF1-208ENST00000546997 TRAV26-1A0A087WT03 109 aa12.33□□□□□ -0.44
BRF1-208ENST00000546997 ADARB2-AS1A8MUL3 147 aa12.33□□□□□ -0.44
BRF1-208ENST00000546997 PRIMA1Q86XR5 153 aa12.33□□□□□ -0.44
BRF1-208ENST00000546997 NRACQ8N912 160 aa12.33□□□□□ -0.44
BRF1-208ENST00000546997 RAX2Q96IS3 184 aa12.33□□□□□ -0.44
BRF1-208ENST00000546997 CDIP1Q9H305 208 aa12.33□□□□□ -0.44
BRF1-208ENST00000546997 STAB1Q9NY15 2570 aa12.32□□□□□ -0.44
BRF1-208ENST00000546997 ERCC8Q13216 396 aa12.32□□□□□ -0.44
BRF1-208ENST00000546997 AMTNQ6UX39 209 aa12.32□□□□□ -0.44
BRF1-208ENST00000546997 MRPL53Q96EL3 112 aaKnown RBP12.32□□□□□ -0.44
BRF1-208ENST00000546997 TSPAN13O95857 204 aa12.31□□□□□ -0.44
BRF1-208ENST00000546997 FHL3Q13643 280 aa12.31□□□□□ -0.44
BRF1-208ENST00000546997 KRTAP24-1Q3LI83 254 aa12.31□□□□□ -0.44
BRF1-208ENST00000546997 PPDPFLQ8WWR9 84 aa12.31□□□□□ -0.44
BRF1-208ENST00000546997 IGHV7-4-1A0A0J9YVY3 117 aa12.3□□□□□ -0.44
BRF1-208ENST00000546997 GAS8-AS1O95177 125 aa12.3□□□□□ -0.44
BRF1-208ENST00000546997 SPINK8P0C7L1 97 aa12.3□□□□□ -0.44
BRF1-208ENST00000546997 UBE2D1P51668 147 aa12.3□□□□□ -0.44
BRF1-208ENST00000546997 ORMDL2Q53FV1 153 aa12.3□□□□□ -0.44
BRF1-208ENST00000546997 SYT8Q8NBV8 401 aa12.3□□□□□ -0.44
BRF1-208ENST00000546997 C20orf78Q9BR46 151 aa12.3□□□□□ -0.44
BRF1-208ENST00000546997 K7EMT4 169 aa12.3□□□□□ -0.44
BRF1-208ENST00000546997 LGALS9O00182 355 aa12.3□□□□□ -0.44
BRF1-208ENST00000546997 INSL3P51460 131 aa12.3□□□□□ -0.44
BRF1-208ENST00000546997 NSUN5P1Q3KNT7 163 aa12.3□□□□□ -0.44
BRF1-208ENST00000546997 UFC1Q9Y3C8 167 aa12.3□□□□□ -0.44
BRF1-208ENST00000546997 COL6A5A8TX70 2615 aa12.3□□□□□ -0.44
BRF1-208ENST00000546997 TRBV20-1A0A075B6N2 111 aa12.29□□□□□ -0.44
BRF1-208ENST00000546997 CCL24O00175 119 aa12.29□□□□□ -0.44
BRF1-208ENST00000546997 UBE2D3P61077 147 aa12.29□□□□□ -0.44
BRF1-208ENST00000546997 UBE2D2P62837 147 aa12.29□□□□□ -0.44
BRF1-208ENST00000546997 TNP2Q05952 138 aa12.29□□□□□ -0.44
BRF1-208ENST00000546997 SBSPONQ8IVN8 264 aa12.29□□□□□ -0.44
BRF1-208ENST00000546997 RHPN1-AS1Q9BWJ2 59 aa12.29□□□□□ -0.44
BRF1-208ENST00000546997 M0QXV9 152 aa12.29□□□□□ -0.44
BRF1-208ENST00000546997 C16orf92Q96LL3 132 aa12.29□□□□□ -0.44
BRF1-208ENST00000546997 AGPAT4-IT1Q9H0P7 198 aa12.29□□□□□ -0.44
BRF1-208ENST00000546997 TRRAPQ9Y4A5 3859 aa12.28□□□□□ -0.44
BRF1-208ENST00000546997 TMEM262E9PQX1 116 aa12.28□□□□□ -0.44
BRF1-208ENST00000546997 SMCPP49901 116 aaPredicted RBP12.28□□□□□ -0.44
BRF1-208ENST00000546997 Q6ZUT4 128 aa12.28□□□□□ -0.44
BRF1-208ENST00000546997 TEN1Q86WV5 123 aa12.28□□□□□ -0.44
BRF1-208ENST00000546997 TOMM6Q96B49 74 aa12.28□□□□□ -0.44
BRF1-208ENST00000546997 LINC01549A6NIU2 74 aa12.27□□□□□ -0.44
BRF1-208ENST00000546997 ZNF561-AS1K7EIQ3 104 aa12.27□□□□□ -0.44
BRF1-208ENST00000546997 GATA1P15976 413 aaPredicted RBP12.27□□□□□ -0.44
BRF1-208ENST00000546997 NEXN-AS1Q8NBZ9 246 aa12.27□□□□□ -0.44
BRF1-208ENST00000546997 ERG28Q9UKR5 140 aa12.27□□□□□ -0.44
BRF1-208ENST00000546997 SORL1Q92673 2214 aa12.27□□□□□ -0.45
BRF1-208ENST00000546997 C9orf47Q6ZRZ4 202 aa12.27□□□□□ -0.45
BRF1-208ENST00000546997 SMIM2Q9BVW6 85 aa12.27□□□□□ -0.45
BRF1-208ENST00000546997 IGKV3D-20A0A0C4DH25 116 aa12.26□□□□□ -0.45
BRF1-208ENST00000546997 TMEM78Q5T7P6 136 aa12.26□□□□□ -0.45
BRF1-208ENST00000546997 NDUFA11Q86Y39 141 aa12.26□□□□□ -0.45
BRF1-208ENST00000546997 AGRNO00468 2067 aa12.25□□□□□ -0.45
BRF1-208ENST00000546997 SOCS3O14543 225 aa12.25□□□□□ -0.45
BRF1-208ENST00000546997 C20orf173Q96LM9 149 aa12.25□□□□□ -0.45
BRF1-208ENST00000546997 PAPPA-AS1Q5QFB9 102 aa12.25□□□□□ -0.45
BRF1-208ENST00000546997 NFE4Q86UQ8 179 aa12.25□□□□□ -0.45
BRF1-208ENST00000546997 CITED1Q99966 193 aa12.25□□□□□ -0.45
BRF1-208ENST00000546997 NOTCH3Q9UM47 2321 aa12.24□□□□□ -0.45
BRF1-208ENST00000546997 SCGB3A1Q96QR1 104 aa12.24□□□□□ -0.45
BRF1-208ENST00000546997 IGKV3-7A0A075B6H7 116 aa12.23□□□□□ -0.45
BRF1-208ENST00000546997 PPP1R17O96001 155 aa12.23□□□□□ -0.45
BRF1-208ENST00000546997 CD7P09564 240 aa12.23□□□□□ -0.45
BRF1-208ENST00000546997 RPL11P62913 178 aaKnown RBP12.23□□□□□ -0.45
BRF1-208ENST00000546997 LINC00528Q8N1L1 170 aa12.23□□□□□ -0.45
BRF1-208ENST00000546997 PEMTQ9UBM1 199 aa12.23□□□□□ -0.45
BRF1-208ENST00000546997 M0R381 172 aa12.22□□□□□ -0.45
BRF1-208ENST00000546997 MT-ATP8P03928 68 aa12.22□□□□□ -0.45
BRF1-208ENST00000546997 LENEPQ9Y5L5 61 aa12.22□□□□□ -0.45
BRF1-208ENST00000546997 ZNF688P0C7X2 276 aa12.21□□□□□ -0.45
BRF1-208ENST00000546997 XGP55808 180 aa12.21□□□□□ -0.45
BRF1-208ENST00000546997 PRADC1Q9BSG0 188 aa12.21□□□□□ -0.45
BRF1-208ENST00000546997 ZNF815PA8K554 130 aa12.21□□□□□ -0.46
BRF1-208ENST00000546997 A8MWV9 139 aa12.21□□□□□ -0.46
BRF1-208ENST00000546997 PSMB2P49721 201 aa12.21□□□□□ -0.46
BRF1-208ENST00000546997 SPANXA1Q9NS26 97 aa12.21□□□□□ -0.46
BRF1-208ENST00000546997 OVOL1O14753 267 aa12.2□□□□□ -0.46
BRF1-208ENST00000546997 SUMO2P61956 95 aaKnown RBP12.2□□□□□ -0.46
BRF1-208ENST00000546997 CARD19Q96LW7 228 aa12.2□□□□□ -0.46
BRF1-208ENST00000546997 LINC00477Q96M19 166 aa12.2□□□□□ -0.46
BRF1-208ENST00000546997 ASIPP42127 132 aa12.19□□□□□ -0.46
BRF1-208ENST00000546997 SRSF9Q13242 221 aaKnown RBP eCLIP12.19□□□□□ -0.46
BRF1-208ENST00000546997 SPANXN1Q5VSR9 72 aa12.19□□□□□ -0.46
BRF1-208ENST00000546997 LINC01600Q96MT4 127 aa12.19□□□□□ -0.46
BRF1-208ENST00000546997 C11orf21Q9P2W6 132 aa12.19□□□□□ -0.46
BRF1-208ENST00000546997 HERVK_113P61574 105 aa12.19□□□□□ -0.46
BRF1-208ENST00000546997 ZFAND6Q6FIF0 208 aa12.19□□□□□ -0.46
BRF1-208ENST00000546997 BAALCQ8WXS3 180 aa12.19□□□□□ -0.46
BRF1-208ENST00000546997 LOC107984156A0A0G2JMH3 177 aa12.18□□□□□ -0.46
BRF1-208ENST00000546997 MED14OSP0DP75 135 aa12.18□□□□□ -0.46
BRF1-208ENST00000546997 RPL32P62910 135 aaKnown RBP12.18□□□□□ -0.46
BRF1-208ENST00000546997 GAGE5Q13069 117 aa12.18□□□□□ -0.46
BRF1-208ENST00000546997 GAGE6Q13070 117 aa12.18□□□□□ -0.46
BRF1-208ENST00000546997 SCGB1D4Q6XE38 83 aa12.18□□□□□ -0.46
BRF1-208ENST00000546997 ARL17AQ8IVW1 177 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms