RNA–Protein interactions for RNA: ENST00000546816.5

CCDC38-204, Transcript of coiled-coil domain containing 38, humanhuman

TSL 2

Gene CCDC38, Length 465 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-204ENST00000546816 ZNF815PA8K554 130 aa-0.3□□□□□ -2.46
CCDC38-204ENST00000546816 C10orf142B7Z368 130 aa-0.3□□□□□ -2.46
CCDC38-204ENST00000546816 ARPC5O15511 151 aa-0.3□□□□□ -2.46
CCDC38-204ENST00000546816 IFITM1P13164 125 aa-0.3□□□□□ -2.46
CCDC38-204ENST00000546816 Q5VV11 94 aa-0.3□□□□□ -2.46
CCDC38-204ENST00000546816 Q6ZUT4 128 aa-0.3□□□□□ -2.46
CCDC38-204ENST00000546816 UBE2DNLQ8IWF7 75 aa-0.3□□□□□ -2.46
CCDC38-204ENST00000546816 CTAGE3PQ8IX95 158 aa-0.3□□□□□ -2.46
CCDC38-204ENST00000546816 SMIM3Q9BZL3 60 aa-0.3□□□□□ -2.46
CCDC38-204ENST00000546816 RPRMQ9NS64 109 aa-0.3□□□□□ -2.46
CCDC38-204ENST00000546816 ZMYM4Q5VZL5 1548 aa-0.3□□□□□ -2.46
CCDC38-204ENST00000546816 CSMD3Q7Z407 3707 aa-0.3□□□□□ -2.46
CCDC38-204ENST00000546816 TMEM2Q9UHN6 1383 aa-0.31□□□□□ -2.46
CCDC38-204ENST00000546816 TRBV10-3A0A0K0K1G6 114 aa-0.31□□□□□ -2.46
CCDC38-204ENST00000546816 UBE2G1P62253 170 aa-0.31□□□□□ -2.46
CCDC38-204ENST00000546816 GSKIPQ9P0R6 139 aa-0.31□□□□□ -2.46
CCDC38-204ENST00000546816 DAPK1P53355 1430 aa-0.31□□□□□ -2.46
CCDC38-204ENST00000546816 SIPA1L3O60292 1781 aaPredicted RBP-0.32□□□□□ -2.46
CCDC38-204ENST00000546816 DOCK11Q5JSL3 2073 aa-0.32□□□□□ -2.46
CCDC38-204ENST00000546816 CDK5RAP2Q96SN8 1893 aa-0.32□□□□□ -2.46
CCDC38-204ENST00000546816 TRAV1-2A0A0B4J238 106 aa-0.32□□□□□ -2.46
CCDC38-204ENST00000546816 J3QR89 54 aa-0.32□□□□□ -2.46
CCDC38-204ENST00000546816 IFNA17P01571 189 aa-0.32□□□□□ -2.46
CCDC38-204ENST00000546816 M0R2Z0 102 aa-0.33□□□□□ -2.46
CCDC38-204ENST00000546816 IL5P05113 134 aa-0.33□□□□□ -2.46
CCDC38-204ENST00000546816 RPL7L1Q6DKI1 246 aaKnown RBP-0.33□□□□□ -2.46
CCDC38-204ENST00000546816 SCIMPQ6UWF3 145 aa-0.33□□□□□ -2.46
CCDC38-204ENST00000546816 ZNF818PQ6ZRF7 136 aa-0.33□□□□□ -2.46
CCDC38-204ENST00000546816 CNFNQ9BYD5 112 aa-0.33□□□□□ -2.46
CCDC38-204ENST00000546816 MYH13Q9UKX3 1938 aa-0.33□□□□□ -2.46
CCDC38-204ENST00000546816 HUWE1Q7Z6Z7 4374 aaKnown RBP-0.33□□□□□ -2.46
CCDC38-204ENST00000546816 TENM4Q6N022 2769 aa-0.34□□□□□ -2.46
CCDC38-204ENST00000546816 BIVM-ERCC5R4GMW8 1640 aa-0.34□□□□□ -2.46
CCDC38-204ENST00000546816 HSPG2P98160 4391 aa-0.34□□□□□ -2.46
CCDC38-204ENST00000546816 A6NIN4 97 aa-0.34□□□□□ -2.46
CCDC38-204ENST00000546816 FHAD1B1AJZ9 1412 aa-0.34□□□□□ -2.46
CCDC38-204ENST00000546816 APOC4-APOC2K7ER74 178 aa-0.34□□□□□ -2.46
CCDC38-204ENST00000546816 NPFFO15130 113 aa-0.34□□□□□ -2.46
CCDC38-204ENST00000546816 PIN1P1O15428 100 aa-0.34□□□□□ -2.46
CCDC38-204ENST00000546816 SPINK8P0C7L1 97 aa-0.34□□□□□ -2.46
CCDC38-204ENST00000546816 PIPP12273 146 aaPredicted RBP-0.34□□□□□ -2.46
CCDC38-204ENST00000546816 CBLN1P23435 193 aa-0.34□□□□□ -2.46
CCDC38-204ENST00000546816 RRAS2P62070 204 aaPredicted RBP-0.34□□□□□ -2.46
CCDC38-204ENST00000546816 PSMG3Q9BT73 122 aaPredicted RBP-0.34□□□□□ -2.46
CCDC38-204ENST00000546816 LPAP08519 4548 aa-0.34□□□□□ -2.46
CCDC38-204ENST00000546816 PARP14Q460N5 1801 aa-0.34□□□□□ -2.46
CCDC38-204ENST00000546816 KMT2AQ03164 3969 aa-0.35□□□□□ -2.46
CCDC38-204ENST00000546816 MYCBP2O75592 4640 aa-0.35□□□□□ -2.47
CCDC38-204ENST00000546816 ARFGEF1Q9Y6D6 1849 aa-0.35□□□□□ -2.47
CCDC38-204ENST00000546816 A0A0D9SFI3 127 aa-0.35□□□□□ -2.47
CCDC38-204ENST00000546816 CFDP00746 253 aaPredicted RBP-0.35□□□□□ -2.47
CCDC38-204ENST00000546816 PRO0255Q9UI72 69 aa-0.35□□□□□ -2.47
CCDC38-204ENST00000546816 K7ERU9 68 aa-0.36□□□□□ -2.47
CCDC38-204ENST00000546816 NDUFB6O95139 128 aa-0.36□□□□□ -2.47
CCDC38-204ENST00000546816 ALX1Q15699 326 aa-0.36□□□□□ -2.47
CCDC38-204ENST00000546816 BAGE3Q86Y29 109 aa-0.36□□□□□ -2.47
CCDC38-204ENST00000546816 SPTSSBQ8NFR3 76 aa-0.36□□□□□ -2.47
CCDC38-204ENST00000546816 SPTSSAQ969W0 71 aa-0.36□□□□□ -2.47
CCDC38-204ENST00000546816 LINC00312Q9Y6C7 94 aa-0.36□□□□□ -2.47
CCDC38-204ENST00000546816 LRRC37A3O60309 1634 aa-0.36□□□□□ -2.47
CCDC38-204ENST00000546816 NHSL1Q5SYE7 1610 aa-0.36□□□□□ -2.47
CCDC38-204ENST00000546816 LRP2P98164 4655 aa-0.36□□□□□ -2.47
CCDC38-204ENST00000546816 NCOR1O75376 2440 aa-0.37□□□□□ -2.47
CCDC38-204ENST00000546816 GUCA1AP43080 201 aaPredicted RBP-0.37□□□□□ -2.47
CCDC38-204ENST00000546816 CCL8P80075 99 aa-0.37□□□□□ -2.47
CCDC38-204ENST00000546816 WFDC2Q14508 124 aa-0.37□□□□□ -2.47
CCDC38-204ENST00000546816 TSTD1Q8NFU3 115 aa-0.37□□□□□ -2.47
CCDC38-204ENST00000546816 LZICQ8WZA0 190 aa-0.37□□□□□ -2.47
CCDC38-204ENST00000546816 SDF2Q99470 211 aa-0.37□□□□□ -2.47
CCDC38-204ENST00000546816 SPTBN2O15020 2390 aa-0.37□□□□□ -2.47
CCDC38-204ENST00000546816 CEP152O94986 1710 aa-0.38□□□□□ -2.47
CCDC38-204ENST00000546816 IFT172Q9UG01 1749 aa-0.38□□□□□ -2.47
CCDC38-204ENST00000546816 FAM208BQ5VWN6 2430 aa-0.38□□□□□ -2.47
CCDC38-204ENST00000546816 ZNF292O60281 2723 aa-0.38□□□□□ -2.47
CCDC38-204ENST00000546816 M0R3E3 92 aa-0.38□□□□□ -2.47
CCDC38-204ENST00000546816 SNCGO76070 127 aa-0.38□□□□□ -2.47
CCDC38-204ENST00000546816 RPS25P62851 125 aaKnown RBP-0.38□□□□□ -2.47
CCDC38-204ENST00000546816 SMIM21Q3B7S5 101 aa-0.38□□□□□ -2.47
CCDC38-204ENST00000546816 CFAP126Q5VTH2 177 aa-0.38□□□□□ -2.47
CCDC38-204ENST00000546816 ANP32BQ92688 251 aaKnown RBP-0.38□□□□□ -2.47
CCDC38-204ENST00000546816 COPZ2Q9P299 210 aa-0.38□□□□□ -2.47
CCDC38-204ENST00000546816 PXDNQ92626 1479 aa-0.38□□□□□ -2.47
CCDC38-204ENST00000546816 CASKIN1Q8WXD9 1431 aa-0.38□□□□□ -2.47
CCDC38-204ENST00000546816 IFT140Q96RY7 1462 aa-0.39□□□□□ -2.47
CCDC38-204ENST00000546816 FAM92AA1XBS5 289 aa-0.39□□□□□ -2.47
CCDC38-204ENST00000546816 CCL18P55774 89 aa-0.39□□□□□ -2.47
CCDC38-204ENST00000546816 S100A7L2Q5SY68 101 aa-0.39□□□□□ -2.47
CCDC38-204ENST00000546816 KCNRGQ8N5I3 272 aa-0.39□□□□□ -2.47
CCDC38-204ENST00000546816 TPT1P8Q9HAU6 139 aa-0.39□□□□□ -2.47
CCDC38-204ENST00000546816 MYH6P13533 1939 aa-0.39□□□□□ -2.47
CCDC38-204ENST00000546816 ZNF609O15014 1411 aa-0.39□□□□□ -2.47
CCDC38-204ENST00000546816 ZNF518AQ6AHZ1 1483 aa-0.4□□□□□ -2.47
CCDC38-204ENST00000546816 LOC105371267A0A1B0GV96 52 aa-0.4□□□□□ -2.47
CCDC38-204ENST00000546816 SIX6O95475 246 aa-0.4□□□□□ -2.47
CCDC38-204ENST00000546816 SMIM6P0DI80 62 aa-0.4□□□□□ -2.47
CCDC38-204ENST00000546816 SPRR2DP22532 72 aa-0.4□□□□□ -2.47
CCDC38-204ENST00000546816 COPZ1P61923 177 aa-0.4□□□□□ -2.47
CCDC38-204ENST00000546816 DEFB109BQ30KR1 87 aa-0.4□□□□□ -2.47
CCDC38-204ENST00000546816 KRTAP6-1Q3LI64 71 aa-0.4□□□□□ -2.47
CCDC38-204ENST00000546816 Q5VSD8 79 aa-0.4□□□□□ -2.47
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms