RNA–Protein interactions for RNA: ENST00000546039.5

PAAF1-216, Transcript of proteasomal ATPase associated factor 1, humanhuman

TSL 3

Gene PAAF1, Length 805 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAAF1-216ENST00000546039 FAM231AP0DMU4 169 aa7.49□□□□□ -1.21
PAAF1-216ENST00000546039 FAM231CP0DMU5 169 aa7.49□□□□□ -1.21
PAAF1-216ENST00000546039 LINC00694P0DN24 101 aa7.49□□□□□ -1.21
PAAF1-216ENST00000546039 CBLN2Q8IUK8 224 aa7.49□□□□□ -1.21
PAAF1-216ENST00000546039 NEXN-AS1Q8NBZ9 246 aa7.49□□□□□ -1.21
PAAF1-216ENST00000546039 TRBV7-3A0A075B6L6 115 aa7.48□□□□□ -1.21
PAAF1-216ENST00000546039 TGIF2-C20orf24A0A0A6YYL0 155 aa7.48□□□□□ -1.21
PAAF1-216ENST00000546039 TRAV26-2A0A0B4J265 109 aa7.48□□□□□ -1.21
PAAF1-216ENST00000546039 GAGE12JA6NER3 117 aa7.48□□□□□ -1.21
PAAF1-216ENST00000546039 PPP1R17O96001 155 aa7.48□□□□□ -1.21
PAAF1-216ENST00000546039 MT-ND6P03923 174 aa7.48□□□□□ -1.21
PAAF1-216ENST00000546039 GAGE1Q13065 139 aa7.48□□□□□ -1.21
PAAF1-216ENST00000546039 GAGE4Q13068 117 aa7.48□□□□□ -1.21
PAAF1-216ENST00000546039 GAGE5Q13069 117 aa7.48□□□□□ -1.21
PAAF1-216ENST00000546039 MRPL51Q4U2R6 128 aaKnown RBP7.48□□□□□ -1.21
PAAF1-216ENST00000546039 GAGE13Q4V321 117 aa7.48□□□□□ -1.21
PAAF1-216ENST00000546039 TMEM136Q6ZRR5 245 aa7.48□□□□□ -1.21
PAAF1-216ENST00000546039 NEGR1Q7Z3B1 354 aa7.48□□□□□ -1.21
PAAF1-216ENST00000546039 YPEL4Q96NS1 127 aa7.48□□□□□ -1.21
PAAF1-216ENST00000546039 GNB1LQ9BYB4 327 aa7.48□□□□□ -1.21
PAAF1-216ENST00000546039 NIT2Q9NQR4 276 aa7.48□□□□□ -1.21
PAAF1-216ENST00000546039 TENM2Q9NT68 2774 aa7.48□□□□□ -1.21
PAAF1-216ENST00000546039 PPBPP02775 128 aa7.47□□□□□ -1.21
PAAF1-216ENST00000546039 UBE2D3P61077 147 aa7.47□□□□□ -1.21
PAAF1-216ENST00000546039 UBE2D2P62837 147 aa7.47□□□□□ -1.21
PAAF1-216ENST00000546039 OR10J3Q5JRS4 329 aa7.47□□□□□ -1.21
PAAF1-216ENST00000546039 SREK1IP1Q8N9Q2 155 aaPredicted RBP7.47□□□□□ -1.21
PAAF1-216ENST00000546039 ZNRF2Q8NHG8 242 aa7.47□□□□□ -1.21
PAAF1-216ENST00000546039 Q9UF83 564 aa7.47□□□□□ -1.21
PAAF1-216ENST00000546039 TNFRSF18Q9Y5U5 241 aa7.47□□□□□ -1.21
PAAF1-216ENST00000546039 NCR2O95944 276 aa7.46□□□□□ -1.22
PAAF1-216ENST00000546039 CKS2P33552 79 aa7.46□□□□□ -1.22
PAAF1-216ENST00000546039 TIRAPP58753 221 aa7.46□□□□□ -1.22
PAAF1-216ENST00000546039 ATP6V0E2Q8NHE4 81 aa7.46□□□□□ -1.22
PAAF1-216ENST00000546039 RPL39LQ96EH5 51 aaKnown RBP7.46□□□□□ -1.22
PAAF1-216ENST00000546039 TRBV6-5A0A0K0K1A5 114 aa7.45□□□□□ -1.22
PAAF1-216ENST00000546039 D6R8Y8 96 aa7.45□□□□□ -1.22
PAAF1-216ENST00000546039 SMKR1H3BMG3 65 aa7.45□□□□□ -1.22
PAAF1-216ENST00000546039 CCL18P55774 89 aa7.45□□□□□ -1.22
PAAF1-216ENST00000546039 DAZ4Q86SG3 579 aaKnown RBP7.45□□□□□ -1.22
PAAF1-216ENST00000546039 ORMDL3Q8N138 153 aa7.45□□□□□ -1.22
PAAF1-216ENST00000546039 NRACQ8N912 160 aa7.45□□□□□ -1.22
PAAF1-216ENST00000546039 GTSF1LQ9H1H1 148 aa7.45□□□□□ -1.22
PAAF1-216ENST00000546039 DAZ3Q9NR90 486 aaKnown RBP7.45□□□□□ -1.22
PAAF1-216ENST00000546039 LAMTOR2Q9Y2Q5 125 aa7.45□□□□□ -1.22
PAAF1-216ENST00000546039 PHOX2AO14813 284 aa7.44□□□□□ -1.22
PAAF1-216ENST00000546039 SCO1O75880 301 aa7.44□□□□□ -1.22
PAAF1-216ENST00000546039 APCSP02743 223 aa7.44□□□□□ -1.22
PAAF1-216ENST00000546039 RPS10P46783 165 aaKnown RBP7.44□□□□□ -1.22
PAAF1-216ENST00000546039 TMEM97Q5BJF2 176 aa7.44□□□□□ -1.22
PAAF1-216ENST00000546039 UBE2DNLQ8IWF7 75 aa7.44□□□□□ -1.22
PAAF1-216ENST00000546039 MRPL18Q9H0U6 180 aaKnown RBP7.44□□□□□ -1.22
PAAF1-216ENST00000546039 ST20Q9HBF5 79 aa7.44□□□□□ -1.22
PAAF1-216ENST00000546039 SDHAF1A6NFY7 115 aa7.43□□□□□ -1.22
PAAF1-216ENST00000546039 GAS8-AS1O95177 125 aa7.43□□□□□ -1.22
PAAF1-216ENST00000546039 ESRGQ1W209 222 aa7.43□□□□□ -1.22
PAAF1-216ENST00000546039 LGALS9CQ6DKI2 356 aa7.43□□□□□ -1.22
PAAF1-216ENST00000546039 LYPD5Q6UWN5 251 aa7.43□□□□□ -1.22
PAAF1-216ENST00000546039 PRELID3AQ96N28 172 aa7.43□□□□□ -1.22
PAAF1-216ENST00000546039 C20orf78Q9BR46 151 aa7.43□□□□□ -1.22
PAAF1-216ENST00000546039 MRPS16Q9Y3D3 137 aaKnown RBP7.43□□□□□ -1.22
PAAF1-216ENST00000546039 TRAPPC1Q9Y5R8 145 aa7.43□□□□□ -1.22
PAAF1-216ENST00000546039 PLECQ15149 4684 aaKnown RBP7.43□□□□□ -1.22
PAAF1-216ENST00000546039 TNFRSF6BO95407 300 aa7.42□□□□□ -1.22
PAAF1-216ENST00000546039 NPYP01303 97 aa7.42□□□□□ -1.22
PAAF1-216ENST00000546039 SUMO2P61956 95 aaKnown RBP7.42□□□□□ -1.22
PAAF1-216ENST00000546039 RPL32P62910 135 aaKnown RBP7.42□□□□□ -1.22
PAAF1-216ENST00000546039 FABP9Q0Z7S8 132 aa7.42□□□□□ -1.22
PAAF1-216ENST00000546039 LELP1Q5T871 98 aa7.42□□□□□ -1.22
PAAF1-216ENST00000546039 LINC00476Q8WZB0 136 aa7.42□□□□□ -1.22
PAAF1-216ENST00000546039 TMEM70Q9BUB7 260 aa7.42□□□□□ -1.22
PAAF1-216ENST00000546039 LINC00588Q9Y4M8 146 aa7.42□□□□□ -1.22
PAAF1-216ENST00000546039 ALMS1Q8TCU4 4167 aa7.42□□□□□ -1.22
PAAF1-216ENST00000546039 IGHV3-38A0A0C4DH36 116 aa7.41□□□□□ -1.22
PAAF1-216ENST00000546039 TRBV27A0A0K0K1C4 114 aa7.41□□□□□ -1.22
PAAF1-216ENST00000546039 COLCA2A8K830 154 aa7.41□□□□□ -1.22
PAAF1-216ENST00000546039 I3L3M4 83 aa7.41□□□□□ -1.22
PAAF1-216ENST00000546039 POLR2KP53803 58 aaKnown RBP7.41□□□□□ -1.22
PAAF1-216ENST00000546039 COTL1Q14019 142 aa7.41□□□□□ -1.22
PAAF1-216ENST00000546039 KIAA1644Q3SXP7 199 aa7.41□□□□□ -1.22
PAAF1-216ENST00000546039 UPK3BQ9BT76 320 aa7.41□□□□□ -1.22
PAAF1-216ENST00000546039 SMIM2Q9BVW6 85 aa7.41□□□□□ -1.22
PAAF1-216ENST00000546039 MAP1LC3AQ9H492 121 aa7.41□□□□□ -1.22
PAAF1-216ENST00000546039 LYSTQ99698 3801 aa7.4□□□□□ -1.22
PAAF1-216ENST00000546039 TRBV6-8A0A0A6YYG3 113 aa7.4□□□□□ -1.22
PAAF1-216ENST00000546039 TRAV8-6A0A0B4J262 113 aa7.4□□□□□ -1.22
PAAF1-216ENST00000546039 PMCHP20382 165 aa7.4□□□□□ -1.22
PAAF1-216ENST00000546039 TRBV25-1A0A075B6N4 114 aa7.39□□□□□ -1.23
PAAF1-216ENST00000546039 IGHV1-24A0A0C4DH33 117 aa7.39□□□□□ -1.23
PAAF1-216ENST00000546039 PRSS47A8MTI9 375 aa7.39□□□□□ -1.23
PAAF1-216ENST00000546039 VCYO14598 125 aa7.39□□□□□ -1.23
PAAF1-216ENST00000546039 TCAPO15273 167 aa7.39□□□□□ -1.23
PAAF1-216ENST00000546039 RAB5AP20339 215 aa7.39□□□□□ -1.23
PAAF1-216ENST00000546039 IQCJQ1A5X6 159 aa7.39□□□□□ -1.23
PAAF1-216ENST00000546039 KIR2DL4Q99706 377 aa7.39□□□□□ -1.23
PAAF1-216ENST00000546039 ALKBH7Q9BT30 221 aaPredicted RBP7.39□□□□□ -1.23
PAAF1-216ENST00000546039 LY6G6CO95867 125 aa7.38□□□□□ -1.23
PAAF1-216ENST00000546039 AMTP48728 403 aa7.38□□□□□ -1.23
PAAF1-216ENST00000546039 PKIAP61925 76 aa7.38□□□□□ -1.23
PAAF1-216ENST00000546039 NTM-AS1Q6ZSK4 140 aa7.38□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 132 ms