RNA–Protein interactions for RNA: ENST00000545807.6

NECAP1-208, Transcript of NECAP endocytosis associated 1, humanhuman

TSL 5

Gene NECAP1, Length 3,113 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-208ENST00000545807 LEPP41159 167 aa5.09□□□□□ -1.59
NECAP1-208ENST00000545807 WFDC3Q8IUB2 231 aa5.09□□□□□ -1.59
NECAP1-208ENST00000545807 LINC00482Q8N8I6 264 aa5.09□□□□□ -1.59
NECAP1-208ENST00000545807 FAM110DQ8TAY7 271 aaPredicted RBP5.09□□□□□ -1.59
NECAP1-208ENST00000545807 SMCR5Q8TEV8 140 aa5.09□□□□□ -1.59
NECAP1-208ENST00000545807 BUB1B-PAK6H3BSN5 160 aa5.08□□□□□ -1.6
NECAP1-208ENST00000545807 RUSC1-AS1Q66K80 236 aa5.08□□□□□ -1.6
NECAP1-208ENST00000545807 DYNAPQ8N1N2 210 aa5.08□□□□□ -1.6
NECAP1-208ENST00000545807 FMC1Q96HJ9 113 aa5.08□□□□□ -1.6
NECAP1-208ENST00000545807 SERP1Q9Y6X1 66 aa5.08□□□□□ -1.6
NECAP1-208ENST00000545807 TRAV41A0A0B4J266 112 aa5.08□□□□□ -1.6
NECAP1-208ENST00000545807 IGHV1-3A0A0C4DH29 117 aa5.08□□□□□ -1.6
NECAP1-208ENST00000545807 OXLD1Q5BKU9 147 aa5.08□□□□□ -1.6
NECAP1-208ENST00000545807 ZNF833PQ6ZTB9 187 aa5.08□□□□□ -1.6
NECAP1-208ENST00000545807 ZFHX3Q15911 3703 aa5.08□□□□□ -1.6
NECAP1-208ENST00000545807 NBPF19A0A087WUL8 3843 aa5.08□□□□□ -1.6
NECAP1-208ENST00000545807 C15orf61A6NNL5 157 aa5.08□□□□□ -1.6
NECAP1-208ENST00000545807 IGHV3-33P01772 117 aa5.08□□□□□ -1.6
NECAP1-208ENST00000545807 PRB4P10163 310 aaPredicted RBP5.08□□□□□ -1.6
NECAP1-208ENST00000545807 RPL18AQ02543 176 aaKnown RBP5.08□□□□□ -1.6
NECAP1-208ENST00000545807 KMT2BQ9UMN6 2715 aaPredicted RBP5.07□□□□□ -1.6
NECAP1-208ENST00000545807 NDUFC2O95298 119 aa5.07□□□□□ -1.6
NECAP1-208ENST00000545807 NPC2P61916 151 aa5.07□□□□□ -1.6
NECAP1-208ENST00000545807 CD164Q04900 197 aa5.07□□□□□ -1.6
NECAP1-208ENST00000545807 VMA21Q3ZAQ7 101 aa5.07□□□□□ -1.6
NECAP1-208ENST00000545807 C16orf92Q96LL3 132 aa5.07□□□□□ -1.6
NECAP1-208ENST00000545807 LINC00574Q9H8X3 128 aa5.07□□□□□ -1.6
NECAP1-208ENST00000545807 IGLV1-47P01700 117 aa5.07□□□□□ -1.6
NECAP1-208ENST00000545807 IGHV3-30P01768 117 aa5.07□□□□□ -1.6
NECAP1-208ENST00000545807 IGHV3-30-5P0DP03 117 aa5.07□□□□□ -1.6
NECAP1-208ENST00000545807 LMO4P61968 165 aa5.07□□□□□ -1.6
NECAP1-208ENST00000545807 MRPL51Q4U2R6 128 aaKnown RBP5.07□□□□□ -1.6
NECAP1-208ENST00000545807 Q96MF0 132 aa5.07□□□□□ -1.6
NECAP1-208ENST00000545807 RETNQ9HD89 108 aa5.07□□□□□ -1.6
NECAP1-208ENST00000545807 DPM3Q9P2X0 92 aa5.07□□□□□ -1.6
NECAP1-208ENST00000545807 SORL1Q92673 2214 aa5.06□□□□□ -1.6
NECAP1-208ENST00000545807 TRAV12-1A0A0B4J245 112 aa5.06□□□□□ -1.6
NECAP1-208ENST00000545807 C4orf48Q5BLP8 95 aa5.06□□□□□ -1.6
NECAP1-208ENST00000545807 C2orf82Q6UX34 121 aa5.06□□□□□ -1.6
NECAP1-208ENST00000545807 FP248Q71RG6 208 aaPredicted RBP5.06□□□□□ -1.6
NECAP1-208ENST00000545807 FXYD5Q96DB9 178 aa5.06□□□□□ -1.6
NECAP1-208ENST00000545807 SMIM26A0A096LP01 95 aa5.06□□□□□ -1.6
NECAP1-208ENST00000545807 TRBV7-1A0A0A6YYK4 115 aa5.06□□□□□ -1.6
NECAP1-208ENST00000545807 TRBV6-1A0A0K0K1D8 114 aa5.06□□□□□ -1.6
NECAP1-208ENST00000545807 H7C423 109 aa5.06□□□□□ -1.6
NECAP1-208ENST00000545807 LY6EQ16553 131 aa5.06□□□□□ -1.6
NECAP1-208ENST00000545807 MORN5Q5VZ52 161 aa5.06□□□□□ -1.6
NECAP1-208ENST00000545807 WFDC11Q8NEX6 87 aa5.06□□□□□ -1.6
NECAP1-208ENST00000545807 A0A0B4J2C4 111 aa5.06□□□□□ -1.6
NECAP1-208ENST00000545807 A0A0U1RQV1 116 aa5.06□□□□□ -1.6
NECAP1-208ENST00000545807 EIF4EBP3O60516 100 aaPredicted RBP5.06□□□□□ -1.6
NECAP1-208ENST00000545807 WT1-ASQ06250 92 aa5.06□□□□□ -1.6
NECAP1-208ENST00000545807 TMEM263Q8WUH6 116 aaKnown RBP5.06□□□□□ -1.6
NECAP1-208ENST00000545807 PAXXQ9BUH6 204 aa5.06□□□□□ -1.6
NECAP1-208ENST00000545807 TMEM14BQ9NUH8 114 aa5.06□□□□□ -1.6
NECAP1-208ENST00000545807 HIVEP2P31629 2446 aa5.05□□□□□ -1.6
NECAP1-208ENST00000545807 TEP1Q99973 2627 aaKnown RBP5.05□□□□□ -1.6
NECAP1-208ENST00000545807 IGKV1OR2-108A0A075B7D4 117 aa5.05□□□□□ -1.6
NECAP1-208ENST00000545807 A0A0J9YY99 117 aa5.05□□□□□ -1.6
NECAP1-208ENST00000545807 TRBV30A0A0K0K1B3 111 aa5.05□□□□□ -1.6
NECAP1-208ENST00000545807 FSTL3O95633 263 aa5.05□□□□□ -1.6
NECAP1-208ENST00000545807 SAA4P35542 130 aa5.05□□□□□ -1.6
NECAP1-208ENST00000545807 PMAIP1Q13794 54 aa5.05□□□□□ -1.6
NECAP1-208ENST00000545807 FN1P02751 2386 aaKnown RBP5.05□□□□□ -1.6
NECAP1-208ENST00000545807 IGHV3-35A0A0C4DH35 117 aa5.05□□□□□ -1.6
NECAP1-208ENST00000545807 RNF223E7ERA6 249 aa5.05□□□□□ -1.6
NECAP1-208ENST00000545807 F8VRH5 84 aa5.05□□□□□ -1.6
NECAP1-208ENST00000545807 IGLV2-23P01705 113 aa5.05□□□□□ -1.6
NECAP1-208ENST00000545807 IGHV3-23P01764 117 aa5.05□□□□□ -1.6
NECAP1-208ENST00000545807 HOXB4P17483 251 aaPredicted RBP5.05□□□□□ -1.6
NECAP1-208ENST00000545807 Q86TA4 180 aa5.05□□□□□ -1.6
NECAP1-208ENST00000545807 LY6G5BQ8NDX9 201 aa5.05□□□□□ -1.6
NECAP1-208ENST00000545807 C17orf77Q96MU5 243 aa5.05□□□□□ -1.6
NECAP1-208ENST00000545807 IGHV3OR16-8A0A075B7F1 116 aa5.04□□□□□ -1.6
NECAP1-208ENST00000545807 ZNF815PA8K554 130 aa5.04□□□□□ -1.6
NECAP1-208ENST00000545807 RPL27AP46776 148 aaKnown RBP5.04□□□□□ -1.6
NECAP1-208ENST00000545807 ERHP84090 104 aaKnown RBP5.04□□□□□ -1.6
NECAP1-208ENST00000545807 PRCDQ00LT1 54 aa5.04□□□□□ -1.6
NECAP1-208ENST00000545807 IGHV4-38-2P0DP08 117 aa5.04□□□□□ -1.6
NECAP1-208ENST00000545807 C9orf139Q6ZV77 190 aa5.04□□□□□ -1.6
NECAP1-208ENST00000545807 MRPL36Q9P0J6 103 aaKnown RBP5.04□□□□□ -1.6
NECAP1-208ENST00000545807 PEMTQ9UBM1 199 aa5.04□□□□□ -1.6
NECAP1-208ENST00000545807 CGB1A6NKQ9 187 aa5.03□□□□□ -1.6
NECAP1-208ENST00000545807 FHL2Q14192 279 aa5.03□□□□□ -1.6
NECAP1-208ENST00000545807 NSUN5P1Q3KNT7 163 aa5.03□□□□□ -1.6
NECAP1-208ENST00000545807 TMEM30BQ3MIR4 351 aa5.03□□□□□ -1.6
NECAP1-208ENST00000545807 BRK1Q8WUW1 75 aa5.03□□□□□ -1.6
NECAP1-208ENST00000545807 IGLV2-18A0A075B6J9 118 aa5.03□□□□□ -1.6
NECAP1-208ENST00000545807 NDUFA3O95167 84 aa5.03□□□□□ -1.6
NECAP1-208ENST00000545807 TCRAP04437 139 aa5.03□□□□□ -1.6
NECAP1-208ENST00000545807 RNASE2P10153 161 aaKnown RBP5.03□□□□□ -1.6
NECAP1-208ENST00000545807 ECSCRQ19T08 205 aa5.03□□□□□ -1.6
NECAP1-208ENST00000545807 TMEM167AQ8TBQ9 72 aa5.03□□□□□ -1.6
NECAP1-208ENST00000545807 SRSF12Q8WXF0 261 aaKnown RBP5.03□□□□□ -1.6
NECAP1-208ENST00000545807 OTORQ9NRC9 128 aa5.03□□□□□ -1.6
NECAP1-208ENST00000545807 H3BTX0 84 aa5.03□□□□□ -1.6
NECAP1-208ENST00000545807 CKS2P33552 79 aa5.03□□□□□ -1.6
NECAP1-208ENST00000545807 SCGB1D4Q6XE38 83 aa5.03□□□□□ -1.6
NECAP1-208ENST00000545807 SLC25A29Q8N8R3 303 aa5.03□□□□□ -1.6
NECAP1-208ENST00000545807 NDUFA4L2Q9NRX3 87 aa5.03□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms