RNA–Protein interactions for RNA: ENST00000545663.5

CLSTN3-216, Transcript of calsyntenin 3, humanhuman

TSL 4

Gene CLSTN3, Length 533 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-216ENST00000545663 DNLZQ5SXM8 178 aa9.83□□□□□ -0.84
CLSTN3-216ENST00000545663 PRR27Q6MZM9 219 aa9.83□□□□□ -0.84
CLSTN3-216ENST00000545663 SH2D6Q7Z4S9 175 aa9.83□□□□□ -0.84
CLSTN3-216ENST00000545663 ATP6V0E2Q8NHE4 81 aa9.83□□□□□ -0.84
CLSTN3-216ENST00000545663 NAT8Q9UHE5 227 aa9.83□□□□□ -0.84
CLSTN3-216ENST00000545663 OCC1Q8TAD7 63 aa9.82□□□□□ -0.84
CLSTN3-216ENST00000545663 IGKV3D-20A0A0C4DH25 116 aa9.81□□□□□ -0.84
CLSTN3-216ENST00000545663 A0A0J9YXV3 536 aa9.81□□□□□ -0.84
CLSTN3-216ENST00000545663 KRBOX1C9JBD0 128 aa9.81□□□□□ -0.84
CLSTN3-216ENST00000545663 TYMSP04818 313 aa9.81□□□□□ -0.84
CLSTN3-216ENST00000545663 PNRC1Q12796 327 aaPredicted RBP9.81□□□□□ -0.84
CLSTN3-216ENST00000545663 PIK3CD-AS1Q5SR53 167 aa9.81□□□□□ -0.84
CLSTN3-216ENST00000545663 FAM231DQ6ZW35 169 aa9.81□□□□□ -0.84
CLSTN3-216ENST00000545663 PTH2Q96A98 100 aa9.81□□□□□ -0.84
CLSTN3-216ENST00000545663 IL36BQ9NZH7 164 aa9.81□□□□□ -0.84
CLSTN3-216ENST00000545663 A0A0U1RQV1 116 aa9.8□□□□□ -0.84
CLSTN3-216ENST00000545663 C19orf71A6NCJ1 209 aa9.8□□□□□ -0.84
CLSTN3-216ENST00000545663 M0R2P5 195 aa9.8□□□□□ -0.84
CLSTN3-216ENST00000545663 SRSF3P84103 164 aaKnown RBP9.8□□□□□ -0.84
CLSTN3-216ENST00000545663 LINC01551Q86U37 167 aa9.8□□□□□ -0.84
CLSTN3-216ENST00000545663 COMMD7Q86VX2 200 aa9.8□□□□□ -0.84
CLSTN3-216ENST00000545663 C15orf54Q8N8G6 183 aa9.8□□□□□ -0.84
CLSTN3-216ENST00000545663 C11orf21Q9P2W6 132 aa9.8□□□□□ -0.84
CLSTN3-216ENST00000545663 IGKV2D-24A0A075B6R9 120 aa9.79□□□□□ -0.84
CLSTN3-216ENST00000545663 C9JQL5 133 aa9.79□□□□□ -0.84
CLSTN3-216ENST00000545663 M0R036 132 aa9.79□□□□□ -0.84
CLSTN3-216ENST00000545663 GNRH2O43555 120 aa9.79□□□□□ -0.84
CLSTN3-216ENST00000545663 CIDEAO60543 219 aa9.79□□□□□ -0.84
CLSTN3-216ENST00000545663 CT83Q5H943 113 aa9.79□□□□□ -0.84
CLSTN3-216ENST00000545663 OR2D3Q8NGH3 330 aa9.79□□□□□ -0.84
CLSTN3-216ENST00000545663 RASL10AQ92737 203 aa9.79□□□□□ -0.84
CLSTN3-216ENST00000545663 PGPEP1LA6NFU8 196 aa9.78□□□□□ -0.84
CLSTN3-216ENST00000545663 OR4C5Q8NGB2 326 aa9.78□□□□□ -0.84
CLSTN3-216ENST00000545663 C9orf85Q96MD7 179 aa9.78□□□□□ -0.84
CLSTN3-216ENST00000545663 RPP21Q9H633 154 aaKnown RBP9.78□□□□□ -0.84
CLSTN3-216ENST00000545663 OSTCQ9NRP0 149 aa9.78□□□□□ -0.84
CLSTN3-216ENST00000545663 COX11Q9Y6N1 276 aa9.78□□□□□ -0.84
CLSTN3-216ENST00000545663 TMEM218A2RU14 115 aa9.77□□□□□ -0.85
CLSTN3-216ENST00000545663 A8MWL6 223 aa9.77□□□□□ -0.85
CLSTN3-216ENST00000545663 F2Z2F3 143 aa9.77□□□□□ -0.85
CLSTN3-216ENST00000545663 K7EN84 100 aa9.77□□□□□ -0.85
CLSTN3-216ENST00000545663 GATCO43716 136 aaKnown RBP9.77□□□□□ -0.85
CLSTN3-216ENST00000545663 GATA1P15976 413 aaPredicted RBP9.77□□□□□ -0.85
CLSTN3-216ENST00000545663 ADIRFQ15847 76 aa9.77□□□□□ -0.85
CLSTN3-216ENST00000545663 NUDT10Q8NFP7 164 aa9.77□□□□□ -0.85
CLSTN3-216ENST00000545663 NUDT11Q96G61 164 aa9.77□□□□□ -0.85
CLSTN3-216ENST00000545663 PHLDA3Q9Y5J5 127 aa9.77□□□□□ -0.85
CLSTN3-216ENST00000545663 TRAV4A0A0B4J268 109 aa9.76□□□□□ -0.85
CLSTN3-216ENST00000545663 FAM231BA6NCW3 169 aa9.76□□□□□ -0.85
CLSTN3-216ENST00000545663 PPP1R2P9O14990 202 aa9.76□□□□□ -0.85
CLSTN3-216ENST00000545663 OR5AL1P0C617 328 aa9.76□□□□□ -0.85
CLSTN3-216ENST00000545663 RNASE3P12724 160 aaKnown RBP9.76□□□□□ -0.85
CLSTN3-216ENST00000545663 RPL23P62829 140 aaKnown RBP9.76□□□□□ -0.85
CLSTN3-216ENST00000545663 NDUFA5Q16718 116 aa9.76□□□□□ -0.85
CLSTN3-216ENST00000545663 ZFP82Q8N141 532 aa9.76□□□□□ -0.85
CLSTN3-216ENST00000545663 SEC11CQ9BY50 192 aa9.76□□□□□ -0.85
CLSTN3-216ENST00000545663 CRCT1Q9UGL9 99 aa9.76□□□□□ -0.85
CLSTN3-216ENST00000545663 TMSB15BA0A087X1C1 80 aa9.75□□□□□ -0.85
CLSTN3-216ENST00000545663 F8W036 122 aa9.75□□□□□ -0.85
CLSTN3-216ENST00000545663 ARMS2P0C7Q2 107 aa9.75□□□□□ -0.85
CLSTN3-216ENST00000545663 ZNF876PQ49A33 203 aa9.75□□□□□ -0.85
CLSTN3-216ENST00000545663 WDR73Q6P4I2 378 aa9.75□□□□□ -0.85
CLSTN3-216ENST00000545663 SLC25A29Q8N8R3 303 aa9.75□□□□□ -0.85
CLSTN3-216ENST00000545663 ISOC2Q96AB3 205 aa9.75□□□□□ -0.85
CLSTN3-216ENST00000545663 SFRP2Q96HF1 295 aa9.75□□□□□ -0.85
CLSTN3-216ENST00000545663 SSBP4Q9BWG4 385 aaPredicted RBP9.75□□□□□ -0.85
CLSTN3-216ENST00000545663 GFRA4Q9GZZ7 299 aa9.75□□□□□ -0.85
CLSTN3-216ENST00000545663 GTSF1LQ9H1H1 148 aa9.75□□□□□ -0.85
CLSTN3-216ENST00000545663 A8MWV9 139 aa9.74□□□□□ -0.85
CLSTN3-216ENST00000545663 H3BVH4 76 aa9.74□□□□□ -0.85
CLSTN3-216ENST00000545663 SNAI2O43623 268 aa9.74□□□□□ -0.85
CLSTN3-216ENST00000545663 CACNG7P62955 275 aa9.74□□□□□ -0.85
CLSTN3-216ENST00000545663 FER1L6-AS1Q8NA97 138 aa9.74□□□□□ -0.85
CLSTN3-216ENST00000545663 OR10G8Q8NGN5 311 aa9.74□□□□□ -0.85
CLSTN3-216ENST00000545663 RNASE7Q9H1E1 156 aaKnown RBP9.74□□□□□ -0.85
CLSTN3-216ENST00000545663 GRIFINA4D1Z8 144 aa9.73□□□□□ -0.85
CLSTN3-216ENST00000545663 MT-ND4LP03901 98 aa9.73□□□□□ -0.85
CLSTN3-216ENST00000545663 SDIM1Q6ZPB5 146 aa9.73□□□□□ -0.85
CLSTN3-216ENST00000545663 BORCS7Q96B45 105 aa9.73□□□□□ -0.85
CLSTN3-216ENST00000545663 RMI2Q96E14 147 aa9.73□□□□□ -0.85
CLSTN3-216ENST00000545663 RHODO00212 210 aa9.72□□□□□ -0.85
CLSTN3-216ENST00000545663 PHOX2AO14813 284 aa9.72□□□□□ -0.85
CLSTN3-216ENST00000545663 IGLC6P0CF74 106 aa9.72□□□□□ -0.85
CLSTN3-216ENST00000545663 RPL19P84098 196 aaKnown RBP9.72□□□□□ -0.85
CLSTN3-216ENST00000545663 SPANXN1Q5VSR9 72 aa9.72□□□□□ -0.85
CLSTN3-216ENST00000545663 TSKUQ8WUA8 353 aa9.72□□□□□ -0.85
CLSTN3-216ENST00000545663 ANAPC16Q96DE5 110 aa9.72□□□□□ -0.85
CLSTN3-216ENST00000545663 FOXA3P55318 350 aaPredicted RBP9.71□□□□□ -0.86
CLSTN3-216ENST00000545663 ZFP2Q6ZN57 461 aa9.71□□□□□ -0.86
CLSTN3-216ENST00000545663 KIF25-AS1Q9Y6Z4 181 aa9.71□□□□□ -0.86
CLSTN3-216ENST00000545663 CTRLP40313 264 aa9.7□□□□□ -0.86
CLSTN3-216ENST00000545663 C9orf163Q8N9P6 203 aa9.7□□□□□ -0.86
CLSTN3-216ENST00000545663 TPPP3Q9BW30 176 aa9.7□□□□□ -0.86
CLSTN3-216ENST00000545663 CNFNQ9BYD5 112 aa9.7□□□□□ -0.86
CLSTN3-216ENST00000545663 KLK12Q9UKR0 248 aa9.7□□□□□ -0.86
CLSTN3-216ENST00000545663 CARHSP1Q9Y2V2 147 aaKnown RBP9.7□□□□□ -0.86
CLSTN3-216ENST00000545663 IGHV3-73A0A0B4J1V6 119 aa9.69□□□□□ -0.86
CLSTN3-216ENST00000545663 M0R381 172 aa9.69□□□□□ -0.86
CLSTN3-216ENST00000545663 PRSS1P07477 247 aa9.69□□□□□ -0.86
CLSTN3-216ENST00000545663 TRGC1P0CF51 173 aa9.69□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms