RNA–Protein interactions for RNA: ENST00000545432.5

RTN3-214, Transcript of reticulon 3, humanhuman

TSL 4

Gene RTN3, Length 545 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-214ENST00000545432 M0R036 132 aa9.16□□□□□ -0.94
RTN3-214ENST00000545432 PET100P0DJ07 73 aa9.16□□□□□ -0.94
RTN3-214ENST00000545432 FAM162BQ5T6X4 162 aa9.16□□□□□ -0.94
RTN3-214ENST00000545432 CLPSL2Q6UWE3 100 aa9.16□□□□□ -0.94
RTN3-214ENST00000545432 SREK1IP1Q8N9Q2 155 aaPredicted RBP9.16□□□□□ -0.94
RTN3-214ENST00000545432 C20orf203Q8NBC4 194 aa9.16□□□□□ -0.94
RTN3-214ENST00000545432 PSMG3Q9BT73 122 aaPredicted RBP9.16□□□□□ -0.94
RTN3-214ENST00000545432 ATP6V0CP27449 155 aa9.15□□□□□ -0.94
RTN3-214ENST00000545432 SERF2P84101 59 aa9.15□□□□□ -0.94
RTN3-214ENST00000545432 GAGE6Q13070 117 aa9.15□□□□□ -0.94
RTN3-214ENST00000545432 HIST1H2BAQ96A08 127 aa9.15□□□□□ -0.94
RTN3-214ENST00000545432 IGLV10-54A0A075B6I4 117 aa9.14□□□□□ -0.95
RTN3-214ENST00000545432 TRBV25-1A0A075B6N4 114 aa9.14□□□□□ -0.95
RTN3-214ENST00000545432 PEX7O00628 323 aa9.14□□□□□ -0.95
RTN3-214ENST00000545432 NDUFS6O75380 124 aaKnown RBP9.14□□□□□ -0.95
RTN3-214ENST00000545432 MBP02144 154 aa9.14□□□□□ -0.95
RTN3-214ENST00000545432 COX6A2Q02221 97 aa9.14□□□□□ -0.95
RTN3-214ENST00000545432 PRSS3P2Q8NHM4 247 aa9.14□□□□□ -0.95
RTN3-214ENST00000545432 GTSF1Q8WW33 167 aa9.14□□□□□ -0.95
RTN3-214ENST00000545432 DERL1Q9BUN8 251 aa9.14□□□□□ -0.95
RTN3-214ENST00000545432 SSBP4Q9BWG4 385 aaPredicted RBP9.14□□□□□ -0.95
RTN3-214ENST00000545432 TNFSF18Q9UNG2 199 aa9.14□□□□□ -0.95
RTN3-214ENST00000545432 CXCL1P09341 107 aa9.13□□□□□ -0.95
RTN3-214ENST00000545432 C15orf56Q8N910 161 aa9.13□□□□□ -0.95
RTN3-214ENST00000545432 GFRA4Q9GZZ7 299 aa9.13□□□□□ -0.95
RTN3-214ENST00000545432 FAT4Q6V0I7 4981 aa9.12□□□□□ -0.95
RTN3-214ENST00000545432 MUC21A0A0G2JKD1 596 aa9.12□□□□□ -0.95
RTN3-214ENST00000545432 SNAI2O43623 268 aa9.12□□□□□ -0.95
RTN3-214ENST00000545432 RPS10P46783 165 aaKnown RBP9.12□□□□□ -0.95
RTN3-214ENST00000545432 ZNF56Q15929 161 aa9.12□□□□□ -0.95
RTN3-214ENST00000545432 NKX6-2Q9C056 277 aaPredicted RBP9.12□□□□□ -0.95
RTN3-214ENST00000545432 IGLV4-60A0A075B6I1 120 aa9.11□□□□□ -0.95
RTN3-214ENST00000545432 IGHV1-24A0A0C4DH33 117 aa9.11□□□□□ -0.95
RTN3-214ENST00000545432 UPK1BO75841 260 aa9.11□□□□□ -0.95
RTN3-214ENST00000545432 MAJINQ3KP22 176 aa9.11□□□□□ -0.95
RTN3-214ENST00000545432 STPG4Q8N801 248 aa9.11□□□□□ -0.95
RTN3-214ENST00000545432 OR10AG1Q8NH19 301 aa9.11□□□□□ -0.95
RTN3-214ENST00000545432 ACTR3CQ9C0K3 210 aaPredicted RBP9.11□□□□□ -0.95
RTN3-214ENST00000545432 TMSB15BA0A087X1C1 80 aa9.1□□□□□ -0.95
RTN3-214ENST00000545432 FAM74A7A6NL05 159 aa9.1□□□□□ -0.95
RTN3-214ENST00000545432 LTAP01374 205 aa9.1□□□□□ -0.95
RTN3-214ENST00000545432 IFNA7P01567 189 aa9.1□□□□□ -0.95
RTN3-214ENST00000545432 FMC1Q96HJ9 113 aa9.1□□□□□ -0.95
RTN3-214ENST00000545432 MARVELD1Q9BSK0 173 aa9.1□□□□□ -0.95
RTN3-214ENST00000545432 ZNF471Q9BX82 626 aaPredicted RBP9.1□□□□□ -0.95
RTN3-214ENST00000545432 INMT-MINDY4F8WBC2 141 aa9.09□□□□□ -0.95
RTN3-214ENST00000545432 OR5AL1P0C617 328 aa9.09□□□□□ -0.95
RTN3-214ENST00000545432 ZNF726P1Q15940 193 aa9.09□□□□□ -0.95
RTN3-214ENST00000545432 CFAP161Q6P656 301 aa9.09□□□□□ -0.95
RTN3-214ENST00000545432 DEFA1P59665 94 aa9.08□□□□□ -0.96
RTN3-214ENST00000545432 DEFA3P59666 94 aa9.08□□□□□ -0.96
RTN3-214ENST00000545432 INO80EQ8NBZ0 244 aaPredicted RBP9.08□□□□□ -0.96
RTN3-214ENST00000545432 AQP10Q96PS8 301 aa9.08□□□□□ -0.96
RTN3-214ENST00000545432 M0QY20 66 aa9.07□□□□□ -0.96
RTN3-214ENST00000545432 SSNA1O43805 119 aa9.07□□□□□ -0.96
RTN3-214ENST00000545432 Q6ZRP5 223 aa9.07□□□□□ -0.96
RTN3-214ENST00000545432 LYPD6BQ8NI32 183 aa9.07□□□□□ -0.96
RTN3-214ENST00000545432 LINC00474Q9P2X8 69 aa9.07□□□□□ -0.96
RTN3-214ENST00000545432 A0A096LNI7 61 aa9.06□□□□□ -0.96
RTN3-214ENST00000545432 IGKV2-24A0A0C4DH68 120 aa9.06□□□□□ -0.96
RTN3-214ENST00000545432 TCEAL7Q9BRU2 100 aa9.06□□□□□ -0.96
RTN3-214ENST00000545432 MLST8Q9BVC4 326 aa9.06□□□□□ -0.96
RTN3-214ENST00000545432 GVQW2A0A096LPI5 108 aaPredicted RBP9.05□□□□□ -0.96
RTN3-214ENST00000545432 KRTAP9-6A0A140TA67 174 aa9.05□□□□□ -0.96
RTN3-214ENST00000545432 CTXND1A0A1B0GTU2 59 aa9.05□□□□□ -0.96
RTN3-214ENST00000545432 F5H697 171 aa9.05□□□□□ -0.96
RTN3-214ENST00000545432 FHITP49789 147 aa9.05□□□□□ -0.96
RTN3-214ENST00000545432 RAB5CP51148 216 aa9.05□□□□□ -0.96
RTN3-214ENST00000545432 UBE2G2P60604 165 aa9.05□□□□□ -0.96
RTN3-214ENST00000545432 LCE2AQ5TA79 106 aaPredicted RBP9.05□□□□□ -0.96
RTN3-214ENST00000545432 PGLYRP4Q96LB8 373 aa9.05□□□□□ -0.96
RTN3-214ENST00000545432 A6NHS1 94 aa9.04□□□□□ -0.96
RTN3-214ENST00000545432 UBE2G1P62253 170 aa9.04□□□□□ -0.96
RTN3-214ENST00000545432 TMEM243Q9BU79 118 aa9.04□□□□□ -0.96
RTN3-214ENST00000545432 MED28Q9H204 178 aa9.04□□□□□ -0.96
RTN3-214ENST00000545432 GAGE12HA6NDE8 117 aa9.03□□□□□ -0.96
RTN3-214ENST00000545432 H7C1H1 209 aa9.03□□□□□ -0.96
RTN3-214ENST00000545432 IFITM3Q01628 133 aa9.03□□□□□ -0.96
RTN3-214ENST00000545432 SPANXN1Q5VSR9 72 aa9.03□□□□□ -0.96
RTN3-214ENST00000545432 FAM231BA6NCW3 169 aa9.02□□□□□ -0.97
RTN3-214ENST00000545432 MUC21A0A140T8X8 626 aa9.01□□□□□ -0.97
RTN3-214ENST00000545432 HIGD2BQ4VC39 106 aa9.01□□□□□ -0.97
RTN3-214ENST00000545432 ZNF664Q8N3J9 261 aa9.01□□□□□ -0.97
RTN3-214ENST00000545432 AP1S3Q96PC3 154 aa9.01□□□□□ -0.97
RTN3-214ENST00000545432 PSORS1C2Q9UIG4 136 aa9.01□□□□□ -0.97
RTN3-214ENST00000545432 PKIGQ9Y2B9 76 aa9□□□□□ -0.97
RTN3-214ENST00000545432 A0A0U1RQV1 116 aa8.99□□□□□ -0.97
RTN3-214ENST00000545432 SMIM17P0DL12 118 aa8.99□□□□□ -0.97
RTN3-214ENST00000545432 SULT1A2P50226 295 aa8.99□□□□□ -0.97
RTN3-214ENST00000545432 SUMO4Q6EEV6 95 aa8.99□□□□□ -0.97
RTN3-214ENST00000545432 S100A9P06702 114 aaKnown RBP8.98□□□□□ -0.97
RTN3-214ENST00000545432 NKX2-5P52952 324 aaPredicted RBP8.98□□□□□ -0.97
RTN3-214ENST00000545432 FOXI1Q12951 378 aa8.98□□□□□ -0.97
RTN3-214ENST00000545432 CHCHD10Q8WYQ3 142 aaPredicted RBP8.98□□□□□ -0.97
RTN3-214ENST00000545432 NIT2Q9NQR4 276 aa8.98□□□□□ -0.97
RTN3-214ENST00000545432 IGLC6P0CF74 106 aa8.97□□□□□ -0.97
RTN3-214ENST00000545432 AKR1C3P42330 323 aa8.97□□□□□ -0.97
RTN3-214ENST00000545432 RPL7L1Q6DKI1 246 aaKnown RBP8.97□□□□□ -0.97
RTN3-214ENST00000545432 RASL11AQ6T310 242 aa8.97□□□□□ -0.97
RTN3-214ENST00000545432 BAGE2Q86Y30 109 aa8.96□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms