RNA–Protein interactions for RNA: ENST00000544223.6

HCFC2-202, Transcript of host cell factor C2, humanhuman

TSL 2

Gene HCFC2, Length 2,538 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC2-202ENST00000544223 STPG4Q8N801 248 aa9.86□□□□□ -0.83
HCFC2-202ENST00000544223 ST20Q9HBF5 79 aa9.86□□□□□ -0.83
HCFC2-202ENST00000544223 CSNK1G2-AS1Q8NCQ2 148 aa9.86□□□□□ -0.83
HCFC2-202ENST00000544223 RNASE8Q8TDE3 154 aaKnown RBP9.86□□□□□ -0.83
HCFC2-202ENST00000544223 IGHV3-38A0A0C4DH36 116 aa9.85□□□□□ -0.83
HCFC2-202ENST00000544223 DEFB4AO15263 64 aa9.85□□□□□ -0.83
HCFC2-202ENST00000544223 PRSS1P07477 247 aa9.85□□□□□ -0.83
HCFC2-202ENST00000544223 GTSCR1Q86UQ5 136 aa9.85□□□□□ -0.83
HCFC2-202ENST00000544223 ZNF479Q96JC4 524 aa9.85□□□□□ -0.83
HCFC2-202ENST00000544223 LINC01546A6NGU7 62 aa9.85□□□□□ -0.83
HCFC2-202ENST00000544223 C2orf88Q9BSF0 95 aa9.85□□□□□ -0.83
HCFC2-202ENST00000544223 LINC01545Q5VT33 79 aa9.84□□□□□ -0.83
HCFC2-202ENST00000544223 TRAV9-2A0A087WT02 112 aa9.84□□□□□ -0.83
HCFC2-202ENST00000544223 POLR2KP53803 58 aaKnown RBP9.84□□□□□ -0.83
HCFC2-202ENST00000544223 C9orf66Q5T8R8 295 aa9.84□□□□□ -0.83
HCFC2-202ENST00000544223 OPRPNQ99935 248 aaPredicted RBP9.84□□□□□ -0.83
HCFC2-202ENST00000544223 MGAM2Q2M2H8 2515 aa9.83□□□□□ -0.84
HCFC2-202ENST00000544223 PLAC8L1A1L4L8 177 aa9.83□□□□□ -0.84
HCFC2-202ENST00000544223 PRSS47A8MTI9 375 aa9.83□□□□□ -0.84
HCFC2-202ENST00000544223 UFSP1Q6NVU6 142 aa9.83□□□□□ -0.84
HCFC2-202ENST00000544223 PET117Q6UWS5 81 aa9.83□□□□□ -0.84
HCFC2-202ENST00000544223 C20orf78Q9BR46 151 aa9.83□□□□□ -0.84
HCFC2-202ENST00000544223 NDUFAF3Q9BU61 184 aa9.83□□□□□ -0.84
HCFC2-202ENST00000544223 GAGE12BA1L429 117 aa9.83□□□□□ -0.84
HCFC2-202ENST00000544223 GAGE7O76087 117 aa9.83□□□□□ -0.84
HCFC2-202ENST00000544223 GAGE12FP0CL80 117 aa9.83□□□□□ -0.84
HCFC2-202ENST00000544223 GAGE12GP0CL81 117 aa9.83□□□□□ -0.84
HCFC2-202ENST00000544223 GAGE12IP0CL82 117 aa9.83□□□□□ -0.84
HCFC2-202ENST00000544223 C2orf66Q6UXQ4 117 aa9.83□□□□□ -0.84
HCFC2-202ENST00000544223 PHLDA1Q8WV24 401 aaPredicted RBP9.83□□□□□ -0.84
HCFC2-202ENST00000544223 GOLT1BQ9Y3E0 138 aa9.83□□□□□ -0.84
HCFC2-202ENST00000544223 CLUHP3Q96NS8 147 aa9.82□□□□□ -0.84
HCFC2-202ENST00000544223 ZFP2Q6ZN57 461 aa9.82□□□□□ -0.84
HCFC2-202ENST00000544223 TP53TG1Q9Y2A0 90 aa9.82□□□□□ -0.84
HCFC2-202ENST00000544223 IGLC3P0DOY3 106 aa9.81□□□□□ -0.84
HCFC2-202ENST00000544223 DEFB135Q30KP9 77 aa9.81□□□□□ -0.84
HCFC2-202ENST00000544223 C3orf56Q8N813 242 aa9.81□□□□□ -0.84
HCFC2-202ENST00000544223 SCGB3A1Q96QR1 104 aa9.81□□□□□ -0.84
HCFC2-202ENST00000544223 C20orf144Q9BQM9 153 aa9.81□□□□□ -0.84
HCFC2-202ENST00000544223 ANKRD39Q53RE8 183 aa9.81□□□□□ -0.84
HCFC2-202ENST00000544223 TMEM263Q8WUH6 116 aaKnown RBP9.81□□□□□ -0.84
HCFC2-202ENST00000544223 TTTY13Q9BZ97 58 aa9.81□□□□□ -0.84
HCFC2-202ENST00000544223 C20orf202A1L168 122 aa9.8□□□□□ -0.84
HCFC2-202ENST00000544223 EREGO14944 169 aa9.8□□□□□ -0.84
HCFC2-202ENST00000544223 ODF1Q14990 250 aa9.8□□□□□ -0.84
HCFC2-202ENST00000544223 CEMP1Q6PRD7 247 aaPredicted RBP9.8□□□□□ -0.84
HCFC2-202ENST00000544223 OR4C5Q8NGB2 326 aa9.8□□□□□ -0.84
HCFC2-202ENST00000544223 IL17DQ8TAD2 202 aa9.8□□□□□ -0.84
HCFC2-202ENST00000544223 MIEN1Q9BRT3 115 aa9.8□□□□□ -0.84
HCFC2-202ENST00000544223 MRPL35Q9NZE8 188 aaKnown RBP9.8□□□□□ -0.84
HCFC2-202ENST00000544223 A8MWV9 139 aa9.79□□□□□ -0.84
HCFC2-202ENST00000544223 TSHBP01222 138 aa9.79□□□□□ -0.84
HCFC2-202ENST00000544223 DEFB130BP0DP73 79 aa9.79□□□□□ -0.84
HCFC2-202ENST00000544223 DEFB130AP0DP74 79 aa9.79□□□□□ -0.84
HCFC2-202ENST00000544223 BATFQ16520 125 aa9.79□□□□□ -0.84
HCFC2-202ENST00000544223 FAM110AQ9BQ89 295 aa9.79□□□□□ -0.84
HCFC2-202ENST00000544223 LOC100131303A0A0U1RQF7 123 aa9.79□□□□□ -0.84
HCFC2-202ENST00000544223 VCYO14598 125 aa9.79□□□□□ -0.84
HCFC2-202ENST00000544223 RRN3P1Q2M238 152 aa9.79□□□□□ -0.84
HCFC2-202ENST00000544223 ORMDL2Q53FV1 153 aa9.79□□□□□ -0.84
HCFC2-202ENST00000544223 RNASE13Q5GAN3 156 aaKnown RBP9.79□□□□□ -0.84
HCFC2-202ENST00000544223 Q6ZN92 141 aa9.79□□□□□ -0.84
HCFC2-202ENST00000544223 NEXN-AS1Q8NBZ9 246 aa9.79□□□□□ -0.84
HCFC2-202ENST00000544223 TOMM6Q96B49 74 aa9.79□□□□□ -0.84
HCFC2-202ENST00000544223 KIR2DL4Q99706 377 aa9.79□□□□□ -0.84
HCFC2-202ENST00000544223 TRBV27A0A0K0K1C4 114 aa9.78□□□□□ -0.84
HCFC2-202ENST00000544223 CMC4P56277 68 aaPredicted RBP9.78□□□□□ -0.84
HCFC2-202ENST00000544223 KRTAP10-11P60412 298 aa9.78□□□□□ -0.84
HCFC2-202ENST00000544223 LINC00467Q9BRT7 94 aa9.78□□□□□ -0.84
HCFC2-202ENST00000544223 DNAH3Q8TD57 4116 aa9.78□□□□□ -0.84
HCFC2-202ENST00000544223 TRGV2A0A075B6R0 118 aa9.78□□□□□ -0.84
HCFC2-202ENST00000544223 A6NJY4 79 aa9.78□□□□□ -0.84
HCFC2-202ENST00000544223 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP9.78□□□□□ -0.84
HCFC2-202ENST00000544223 INSL3P51460 131 aa9.78□□□□□ -0.84
HCFC2-202ENST00000544223 SPXQ9BT56 116 aa9.78□□□□□ -0.84
HCFC2-202ENST00000544223 RS1O15537 224 aa9.77□□□□□ -0.85
HCFC2-202ENST00000544223 TNFRSF18Q9Y5U5 241 aa9.77□□□□□ -0.85
HCFC2-202ENST00000544223 LGALS9BQ3B8N2 356 aa9.77□□□□□ -0.85
HCFC2-202ENST00000544223 LGALS9CQ6DKI2 356 aa9.77□□□□□ -0.85
HCFC2-202ENST00000544223 IGKV2D-26A0A0A0MRZ7 120 aa9.76□□□□□ -0.85
HCFC2-202ENST00000544223 TMEM238LA0A1B0GVL6 79 aa9.76□□□□□ -0.85
HCFC2-202ENST00000544223 PRB2P02812 416 aaPredicted RBP9.76□□□□□ -0.85
HCFC2-202ENST00000544223 WFDC9Q8NEX5 89 aa9.76□□□□□ -0.85
HCFC2-202ENST00000544223 ZNRF2Q8NHG8 242 aa9.76□□□□□ -0.85
HCFC2-202ENST00000544223 BAALCQ8WXS3 180 aa9.76□□□□□ -0.85
HCFC2-202ENST00000544223 C1QTNF4Q9BXJ3 329 aa9.76□□□□□ -0.85
HCFC2-202ENST00000544223 SNHG12Q9BXW3 62 aa9.76□□□□□ -0.85
HCFC2-202ENST00000544223 TRBV6-5A0A0K0K1A5 114 aa9.76□□□□□ -0.85
HCFC2-202ENST00000544223 PRSS29PA6NIE9 313 aa9.76□□□□□ -0.85
HCFC2-202ENST00000544223 PPP1R17O96001 155 aa9.76□□□□□ -0.85
HCFC2-202ENST00000544223 SLC25A29Q8N8R3 303 aa9.76□□□□□ -0.85
HCFC2-202ENST00000544223 IGKV2D-29A0A075B6S2 120 aaPredicted RBP9.75□□□□□ -0.85
HCFC2-202ENST00000544223 IGKV2-29A2NJV5 120 aaPredicted RBP9.75□□□□□ -0.85
HCFC2-202ENST00000544223 NMUP48645 174 aa9.75□□□□□ -0.85
HCFC2-202ENST00000544223 PCP2Q8IVA1 136 aa9.75□□□□□ -0.85
HCFC2-202ENST00000544223 X6R8D5 127 aa9.75□□□□□ -0.85
HCFC2-202ENST00000544223 HSBP1L1C9JCN9 74 aa9.75□□□□□ -0.85
HCFC2-202ENST00000544223 I3L3M4 83 aa9.75□□□□□ -0.85
HCFC2-202ENST00000544223 IGHV4-30-4P0DP06 118 aa9.75□□□□□ -0.85
HCFC2-202ENST00000544223 C16orf74Q96GX8 76 aa9.75□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms