RNA–Protein interactions for RNA: ENST00000543872.6

SMG8-202, Transcript of SMG8, nonsense mediated mRNA decay factor, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMG8, Length 3,477 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG8-202ENST00000543872 CREBBPQ92793 2442 aa9.5□□□□□ -0.89
SMG8-202ENST00000543872 TRAV12-3A0A0B4J271 114 aa9.5□□□□□ -0.89
SMG8-202ENST00000543872 TMEM223A0PJW6 202 aa9.5□□□□□ -0.89
SMG8-202ENST00000543872 POLR2KP53803 58 aaKnown RBP9.5□□□□□ -0.89
SMG8-202ENST00000543872 LY6DQ14210 128 aa9.5□□□□□ -0.89
SMG8-202ENST00000543872 CCDC140Q96MF4 163 aa9.5□□□□□ -0.89
SMG8-202ENST00000543872 ATP6V0E1O15342 81 aa9.49□□□□□ -0.89
SMG8-202ENST00000543872 TIMM17AQ99595 171 aa9.49□□□□□ -0.89
SMG8-202ENST00000543872 DUX5Q96PT3 197 aa9.49□□□□□ -0.89
SMG8-202ENST00000543872 C4orf26Q17RF5 130 aa9.48□□□□□ -0.89
SMG8-202ENST00000543872 LINC00477Q96M19 166 aa9.48□□□□□ -0.89
SMG8-202ENST00000543872 HRCT1Q6UXD1 115 aa9.48□□□□□ -0.89
SMG8-202ENST00000543872 TRBV7-7A0A0K0K1E9 115 aa9.48□□□□□ -0.89
SMG8-202ENST00000543872 RNASE13Q5GAN3 156 aaKnown RBP9.48□□□□□ -0.89
SMG8-202ENST00000543872 VMO1Q7Z5L0 202 aa9.48□□□□□ -0.89
SMG8-202ENST00000543872 POM121L12Q8N7R1 296 aa9.48□□□□□ -0.89
SMG8-202ENST00000543872 SPTAN1Q13813 2472 aaKnown RBP9.48□□□□□ -0.89
SMG8-202ENST00000543872 RELNP78509 3460 aa9.47□□□□□ -0.89
SMG8-202ENST00000543872 A0A1B0GX51 115 aa9.47□□□□□ -0.89
SMG8-202ENST00000543872 A8MZ25 164 aa9.47□□□□□ -0.89
SMG8-202ENST00000543872 UQCRQO14949 82 aa9.47□□□□□ -0.89
SMG8-202ENST00000543872 ADAMTSL4-AS1Q5T5F5 129 aa9.47□□□□□ -0.89
SMG8-202ENST00000543872 ANKRD11Q6UB99 2663 aaPredicted RBP9.47□□□□□ -0.89
SMG8-202ENST00000543872 LINC00315P59091 139 aa9.47□□□□□ -0.89
SMG8-202ENST00000543872 DAND5Q8N907 189 aa9.47□□□□□ -0.89
SMG8-202ENST00000543872 MRPL53Q96EL3 112 aaKnown RBP9.47□□□□□ -0.89
SMG8-202ENST00000543872 H3BT86 120 aa9.46□□□□□ -0.89
SMG8-202ENST00000543872 GAGE2AQ6NT46 116 aa9.46□□□□□ -0.89
SMG8-202ENST00000543872 KIR2DL5BQ8NHK3 375 aa9.46□□□□□ -0.89
SMG8-202ENST00000543872 LINC00526Q96FQ7 95 aa9.46□□□□□ -0.89
SMG8-202ENST00000543872 I3L3M4 83 aa9.46□□□□□ -0.9
SMG8-202ENST00000543872 IGHV3-30-3P0DP02 117 aa9.46□□□□□ -0.9
SMG8-202ENST00000543872 TMEM219Q86XT9 240 aa9.46□□□□□ -0.9
SMG8-202ENST00000543872 Q8N9W7 124 aa9.46□□□□□ -0.9
SMG8-202ENST00000543872 FAM110DQ8TAY7 271 aaPredicted RBP9.46□□□□□ -0.9
SMG8-202ENST00000543872 EBI3Q14213 229 aa9.46□□□□□ -0.9
SMG8-202ENST00000543872 C9orf139Q6ZV77 190 aa9.46□□□□□ -0.9
SMG8-202ENST00000543872 KIF25-AS1Q9Y6Z4 181 aa9.45□□□□□ -0.9
SMG8-202ENST00000543872 NACAE9PAV3 2078 aa9.45□□□□□ -0.9
SMG8-202ENST00000543872 A0A0U1RRA0 63 aa9.45□□□□□ -0.9
SMG8-202ENST00000543872 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP9.45□□□□□ -0.9
SMG8-202ENST00000543872 TIMM21Q9BVV7 248 aa9.45□□□□□ -0.9
SMG8-202ENST00000543872 RIF1Q5UIP0 2472 aaKnown RBP9.44□□□□□ -0.9
SMG8-202ENST00000543872 IGHV4OR15-8A0A075B7B6 117 aa9.44□□□□□ -0.9
SMG8-202ENST00000543872 A0A087WW49 117 aa9.44□□□□□ -0.9
SMG8-202ENST00000543872 TRAV41A0A0B4J266 112 aa9.44□□□□□ -0.9
SMG8-202ENST00000543872 LINC01560Q8TB33 94 aa9.44□□□□□ -0.9
SMG8-202ENST00000543872 CYSTM1Q9H1C7 97 aa9.44□□□□□ -0.9
SMG8-202ENST00000543872 LENEPQ9Y5L5 61 aa9.44□□□□□ -0.9
SMG8-202ENST00000543872 DOPEY2Q9Y3R5 2298 aa9.44□□□□□ -0.9
SMG8-202ENST00000543872 hADV29S1A0JD25 119 aa9.44□□□□□ -0.9
SMG8-202ENST00000543872 IGKV3-20P01619 116 aa9.44□□□□□ -0.9
SMG8-202ENST00000543872 NDUFA12Q9UI09 145 aa9.44□□□□□ -0.9
SMG8-202ENST00000543872 UNQ9165/PRO28630Q6UXU0 137 aa9.43□□□□□ -0.9
SMG8-202ENST00000543872 OVOL1O14753 267 aa9.43□□□□□ -0.9
SMG8-202ENST00000543872 ITLN2Q8WWU7 325 aaPredicted RBP9.43□□□□□ -0.9
SMG8-202ENST00000543872 LY6G5BQ8NDX9 201 aa9.43□□□□□ -0.9
SMG8-202ENST00000543872 CITED2Q99967 270 aaPredicted RBP9.43□□□□□ -0.9
SMG8-202ENST00000543872 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP9.42□□□□□ -0.9
SMG8-202ENST00000543872 LST1O00453 97 aa9.42□□□□□ -0.9
SMG8-202ENST00000543872 RS1O15537 224 aa9.42□□□□□ -0.9
SMG8-202ENST00000543872 ODF3BA8MYP8 253 aa9.42□□□□□ -0.9
SMG8-202ENST00000543872 OXTP01178 125 aa9.42□□□□□ -0.9
SMG8-202ENST00000543872 Q8N6K4 173 aa9.42□□□□□ -0.9
SMG8-202ENST00000543872 DEFB124Q8NES8 71 aa9.42□□□□□ -0.9
SMG8-202ENST00000543872 TRBV27A0A0K0K1C4 114 aa9.41□□□□□ -0.9
SMG8-202ENST00000543872 TRBV12-3P01733 135 aa9.41□□□□□ -0.9
SMG8-202ENST00000543872 DSCR8Q96T75 97 aa9.41□□□□□ -0.9
SMG8-202ENST00000543872 FAM240AA0A1B0GVK7 77 aa9.41□□□□□ -0.9
SMG8-202ENST00000543872 IGHV3-11P01762 117 aa9.41□□□□□ -0.9
SMG8-202ENST00000543872 CD28P10747 220 aa9.41□□□□□ -0.9
SMG8-202ENST00000543872 TLN1Q9Y490 2541 aaKnown RBP9.4□□□□□ -0.9
SMG8-202ENST00000543872 IGLV4-3A0A075B6K6 122 aa9.4□□□□□ -0.9
SMG8-202ENST00000543872 SMCR5Q8TEV8 140 aa9.4□□□□□ -0.9
SMG8-202ENST00000543872 LITAFQ99732 161 aa9.4□□□□□ -0.9
SMG8-202ENST00000543872 U3KQE9 123 aa9.4□□□□□ -0.9
SMG8-202ENST00000543872 BDP1A6H8Y1 2624 aa9.4□□□□□ -0.9
SMG8-202ENST00000543872 RPS28P62857 69 aaKnown RBP9.4□□□□□ -0.9
SMG8-202ENST00000543872 C20orf203Q8NBC4 194 aa9.4□□□□□ -0.9
SMG8-202ENST00000543872 IGHV3-73A0A0B4J1V6 119 aa9.4□□□□□ -0.91
SMG8-202ENST00000543872 MED14OSP0DP75 135 aa9.39□□□□□ -0.91
SMG8-202ENST00000543872 COX7CP15954 63 aa9.39□□□□□ -0.91
SMG8-202ENST00000543872 ZNF625Q96I27 306 aaPredicted RBP9.39□□□□□ -0.91
SMG8-202ENST00000543872 TRBV7-1A0A0A6YYK4 115 aa9.39□□□□□ -0.91
SMG8-202ENST00000543872 IGHV1-69P01742 117 aa9.39□□□□□ -0.91
SMG8-202ENST00000543872 C2CD3Q4AC94 2353 aa9.39□□□□□ -0.91
SMG8-202ENST00000543872 TRAV12-2A0A075B6T6 113 aa9.39□□□□□ -0.91
SMG8-202ENST00000543872 RHOHQ15669 191 aa9.39□□□□□ -0.91
SMG8-202ENST00000543872 TMEM61Q8N0U2 210 aa9.38□□□□□ -0.91
SMG8-202ENST00000543872 LINC01600Q96MT4 127 aa9.38□□□□□ -0.91
SMG8-202ENST00000543872 M0QY20 66 aa9.38□□□□□ -0.91
SMG8-202ENST00000543872 M0R1W7 72 aa9.38□□□□□ -0.91
SMG8-202ENST00000543872 MIAQ16674 131 aa9.38□□□□□ -0.91
SMG8-202ENST00000543872 DPH3Q96FX2 82 aa9.38□□□□□ -0.91
SMG8-202ENST00000543872 PIMREGQ9BSJ6 248 aa9.38□□□□□ -0.91
SMG8-202ENST00000543872 HTN1P15515 57 aa9.37□□□□□ -0.91
SMG8-202ENST00000543872 NOTCH3Q9UM47 2321 aa9.37□□□□□ -0.91
SMG8-202ENST00000543872 PTPRQQ9UMZ3 2332 aa9.37□□□□□ -0.91
SMG8-202ENST00000543872 A0A0J9YX75 114 aa9.37□□□□□ -0.91
SMG8-202ENST00000543872 KLRB1Q12918 225 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 79.9 ms