RNA–Protein interactions for RNA: ENST00000542876.1

PPP1CA-210, Transcript of protein phosphatase 1 catalytic subunit alpha, humanhuman

TSL 3

Gene PPP1CA, Length 588 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1CA-210ENST00000542876 C9orf62Q8N4C0 152 aa11.32□□□□□ -0.6
PPP1CA-210ENST00000542876 OR10AG1Q8NH19 301 aa11.32□□□□□ -0.6
PPP1CA-210ENST00000542876 USP17L23D6RBM5 183 aa11.31□□□□□ -0.6
PPP1CA-210ENST00000542876 CXCL1P09341 107 aa11.31□□□□□ -0.6
PPP1CA-210ENST00000542876 KRTAP10-4P60372 401 aaPredicted RBP11.31□□□□□ -0.6
PPP1CA-210ENST00000542876 RPL19P84098 196 aaKnown RBP11.31□□□□□ -0.6
PPP1CA-210ENST00000542876 TMUB2Q71RG4 321 aa11.31□□□□□ -0.6
PPP1CA-210ENST00000542876 BCL2L11O43521 198 aa11.3□□□□□ -0.6
PPP1CA-210ENST00000542876 PFDN1O60925 122 aa11.3□□□□□ -0.6
PPP1CA-210ENST00000542876 SMIM17P0DL12 118 aa11.3□□□□□ -0.6
PPP1CA-210ENST00000542876 PRR27Q6MZM9 219 aa11.3□□□□□ -0.6
PPP1CA-210ENST00000542876 BAGE2Q86Y30 109 aa11.3□□□□□ -0.6
PPP1CA-210ENST00000542876 RPL37AP61513 92 aaKnown RBP11.29□□□□□ -0.6
PPP1CA-210ENST00000542876 DGAT2L7PQ6IED9 249 aa11.29□□□□□ -0.6
PPP1CA-210ENST00000542876 SFT2D1Q8WV19 159 aa11.29□□□□□ -0.6
PPP1CA-210ENST00000542876 LRP1Q07954 4544 aaKnown RBP11.29□□□□□ -0.6
PPP1CA-210ENST00000542876 MUC21A0A0G2JKD1 596 aa11.28□□□□□ -0.6
PPP1CA-210ENST00000542876 MUC21A0A140T8X8 626 aa11.28□□□□□ -0.6
PPP1CA-210ENST00000542876 SNAI2O43623 268 aa11.28□□□□□ -0.6
PPP1CA-210ENST00000542876 OR5AL1P0C617 328 aa11.28□□□□□ -0.6
PPP1CA-210ENST00000542876 NKX2-5P52952 324 aaPredicted RBP11.28□□□□□ -0.6
PPP1CA-210ENST00000542876 SSTP61278 116 aa11.28□□□□□ -0.6
PPP1CA-210ENST00000542876 SSBP4Q9BWG4 385 aaPredicted RBP11.28□□□□□ -0.6
PPP1CA-210ENST00000542876 TRBV25-1A0A075B6N4 114 aa11.27□□□□□ -0.61
PPP1CA-210ENST00000542876 A0A1B0GV50 99 aa11.27□□□□□ -0.61
PPP1CA-210ENST00000542876 SCO2A0A1W2PP80 73 aa11.27□□□□□ -0.61
PPP1CA-210ENST00000542876 FAM213BQ8TBF2 198 aa11.27□□□□□ -0.61
PPP1CA-210ENST00000542876 AP1S3Q96PC3 154 aa11.27□□□□□ -0.61
PPP1CA-210ENST00000542876 DERL1Q9BUN8 251 aa11.27□□□□□ -0.61
PPP1CA-210ENST00000542876 VAX2Q9UIW0 290 aa11.27□□□□□ -0.61
PPP1CA-210ENST00000542876 UMAD1C9J7I0 102 aa11.26□□□□□ -0.61
PPP1CA-210ENST00000542876 PRSS1P07477 247 aa11.26□□□□□ -0.61
PPP1CA-210ENST00000542876 GAGE6Q13070 117 aa11.26□□□□□ -0.61
PPP1CA-210ENST00000542876 CLPSL2Q6UWE3 100 aa11.26□□□□□ -0.61
PPP1CA-210ENST00000542876 MLST8Q9BVC4 326 aa11.26□□□□□ -0.61
PPP1CA-210ENST00000542876 KANTRA0A1W2PQU2 76 aa11.25□□□□□ -0.61
PPP1CA-210ENST00000542876 RBX1P62877 108 aa11.25□□□□□ -0.61
PPP1CA-210ENST00000542876 LINC00269Q8N2A0 174 aa11.25□□□□□ -0.61
PPP1CA-210ENST00000542876 C9orf163Q8N9P6 203 aa11.25□□□□□ -0.61
PPP1CA-210ENST00000542876 MBD3L1Q8WWY6 194 aa11.25□□□□□ -0.61
PPP1CA-210ENST00000542876 PRR34Q9NV39 138 aa11.25□□□□□ -0.61
PPP1CA-210ENST00000542876 NTM-AS1Q6ZSK4 140 aa11.24□□□□□ -0.61
PPP1CA-210ENST00000542876 PLA2G2DQ9UNK4 145 aa11.24□□□□□ -0.61
PPP1CA-210ENST00000542876 IGHV1-24A0A0C4DH33 117 aa11.23□□□□□ -0.61
PPP1CA-210ENST00000542876 H7C1H1 209 aa11.23□□□□□ -0.61
PPP1CA-210ENST00000542876 CLRN3Q8NCR9 226 aa11.23□□□□□ -0.61
PPP1CA-210ENST00000542876 MGPP08493 103 aa11.22□□□□□ -0.61
PPP1CA-210ENST00000542876 TPPP3Q9BW30 176 aa11.22□□□□□ -0.61
PPP1CA-210ENST00000542876 H2AFB1P0C5Y9 115 aa11.21□□□□□ -0.61
PPP1CA-210ENST00000542876 REG3AQ06141 175 aa11.21□□□□□ -0.61
PPP1CA-210ENST00000542876 IQCJQ1A5X6 159 aa11.21□□□□□ -0.61
PPP1CA-210ENST00000542876 SLC51BQ86UW2 128 aa11.21□□□□□ -0.61
PPP1CA-210ENST00000542876 KIF25-AS1Q9Y6Z4 181 aa11.21□□□□□ -0.61
PPP1CA-210ENST00000542876 HMCN2Q8NDA2 5059 aa11.21□□□□□ -0.61
PPP1CA-210ENST00000542876 FAT3Q8TDW7 4589 aa11.21□□□□□ -0.62
PPP1CA-210ENST00000542876 RPL35P42766 123 aaKnown RBP11.2□□□□□ -0.62
PPP1CA-210ENST00000542876 DAZAP1Q96EP5 407 aaKnown RBP11.2□□□□□ -0.62
PPP1CA-210ENST00000542876 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP11.2□□□□□ -0.62
PPP1CA-210ENST00000542876 IGLV10-54A0A075B6I4 117 aa11.19□□□□□ -0.62
PPP1CA-210ENST00000542876 TRAV8-4A0A0B4J246 113 aa11.19□□□□□ -0.62
PPP1CA-210ENST00000542876 hDV102S1A0JD36 115 aa11.19□□□□□ -0.62
PPP1CA-210ENST00000542876 P01737 135 aa11.19□□□□□ -0.62
PPP1CA-210ENST00000542876 RPS20P60866 119 aaKnown RBP11.19□□□□□ -0.62
PPP1CA-210ENST00000542876 EIF5AP63241 154 aaKnown RBP11.19□□□□□ -0.62
PPP1CA-210ENST00000542876 KRTAP26-1Q6PEX3 210 aa11.19□□□□□ -0.62
PPP1CA-210ENST00000542876 SDIM1Q6ZPB5 146 aa11.19□□□□□ -0.62
PPP1CA-210ENST00000542876 FER1L6-AS1Q8NA97 138 aa11.19□□□□□ -0.62
PPP1CA-210ENST00000542876 DPH3Q96FX2 82 aa11.19□□□□□ -0.62
PPP1CA-210ENST00000542876 AP5S1Q9NUS5 200 aa11.19□□□□□ -0.62
PPP1CA-210ENST00000542876 M0QY20 66 aa11.18□□□□□ -0.62
PPP1CA-210ENST00000542876 TRAV16A0A0A6YYK6 109 aaPredicted RBP11.17□□□□□ -0.62
PPP1CA-210ENST00000542876 GZMBP10144 247 aa11.17□□□□□ -0.62
PPP1CA-210ENST00000542876 HNRNPA3P51991 378 aaKnown RBP11.17□□□□□ -0.62
PPP1CA-210ENST00000542876 CNBPP62633 177 aaKnown RBP11.17□□□□□ -0.62
PPP1CA-210ENST00000542876 CACNG7P62955 275 aa11.17□□□□□ -0.62
PPP1CA-210ENST00000542876 SUMO4Q6EEV6 95 aa11.17□□□□□ -0.62
PPP1CA-210ENST00000542876 OR2D3Q8NGH3 330 aa11.17□□□□□ -0.62
PPP1CA-210ENST00000542876 TMEM243Q9BU79 118 aa11.17□□□□□ -0.62
PPP1CA-210ENST00000542876 MANBALQ9NQG1 85 aa11.17□□□□□ -0.62
PPP1CA-210ENST00000542876 XKRY2A2RUG3 117 aa11.16□□□□□ -0.62
PPP1CA-210ENST00000542876 UBE2L6O14933 153 aa11.16□□□□□ -0.62
PPP1CA-210ENST00000542876 CENPWQ5EE01 88 aa11.16□□□□□ -0.62
PPP1CA-210ENST00000542876 GNG13Q9P2W3 67 aa11.16□□□□□ -0.62
PPP1CA-210ENST00000542876 IGHV3-64A0A075B6Q5 118 aa11.15□□□□□ -0.62
PPP1CA-210ENST00000542876 A0A1B0GUV1 79 aa11.15□□□□□ -0.62
PPP1CA-210ENST00000542876 PANO1I0J062 215 aa11.15□□□□□ -0.62
PPP1CA-210ENST00000542876 IGLC6P0CF74 106 aa11.15□□□□□ -0.62
PPP1CA-210ENST00000542876 WDR73Q6P4I2 378 aa11.15□□□□□ -0.62
PPP1CA-210ENST00000542876 RASL11AQ6T310 242 aa11.15□□□□□ -0.62
PPP1CA-210ENST00000542876 C20orf203Q8NBC4 194 aa11.15□□□□□ -0.62
PPP1CA-210ENST00000542876 C11orf52Q96A22 123 aa11.15□□□□□ -0.62
PPP1CA-210ENST00000542876 F2Z2F3 143 aa11.14□□□□□ -0.63
PPP1CA-210ENST00000542876 TRGC1P0CF51 173 aa11.14□□□□□ -0.63
PPP1CA-210ENST00000542876 RAB5CP51148 216 aa11.14□□□□□ -0.63
PPP1CA-210ENST00000542876 TEX46H3BTG2 121 aa11.13□□□□□ -0.63
PPP1CA-210ENST00000542876 GNG4P50150 75 aa11.13□□□□□ -0.63
PPP1CA-210ENST00000542876 SULT1A2P50226 295 aa11.13□□□□□ -0.63
PPP1CA-210ENST00000542876 Q6ZRU5 148 aa11.13□□□□□ -0.63
PPP1CA-210ENST00000542876 SMIM12Q96EX1 92 aa11.13□□□□□ -0.63
PPP1CA-210ENST00000542876 PGLYRP4Q96LB8 373 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms