RNA–Protein interactions for RNA: ENST00000542813.2

SFSWAP-211, Transcript of splicing factor SWAP, humanhuman

TSL 3

Gene SFSWAP, Length 373 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-211ENST00000542813 LINC00694P0DN24 101 aa2.45□□□□□ -2.02
SFSWAP-211ENST00000542813 CGB3P0DN86 165 aa2.45□□□□□ -2.02
SFSWAP-211ENST00000542813 CGB7P0DN87 165 aa2.45□□□□□ -2.02
SFSWAP-211ENST00000542813 CCL1P22362 96 aa2.45□□□□□ -2.02
SFSWAP-211ENST00000542813 HSPE1P61604 102 aaKnown RBP2.45□□□□□ -2.02
SFSWAP-211ENST00000542813 DIAPH2-AS1Q14236 149 aa2.45□□□□□ -2.02
SFSWAP-211ENST00000542813 NNATQ16517 81 aa2.45□□□□□ -2.02
SFSWAP-211ENST00000542813 DEFB134Q4QY38 66 aa2.45□□□□□ -2.02
SFSWAP-211ENST00000542813 NMSQ5H8A3 153 aa2.45□□□□□ -2.02
SFSWAP-211ENST00000542813 TEX36Q5VZQ5 186 aa2.45□□□□□ -2.02
SFSWAP-211ENST00000542813 C2orf91Q6ZV80 131 aa2.45□□□□□ -2.02
SFSWAP-211ENST00000542813 C6orf201Q7Z4U5 140 aa2.45□□□□□ -2.02
SFSWAP-211ENST00000542813 ZNF695Q8IW36 515 aa2.45□□□□□ -2.02
SFSWAP-211ENST00000542813 ATOH7Q8N100 152 aa2.45□□□□□ -2.02
SFSWAP-211ENST00000542813 OR11H6Q8NGC7 330 aa2.45□□□□□ -2.02
SFSWAP-211ENST00000542813 TSKUQ8WUA8 353 aa2.45□□□□□ -2.02
SFSWAP-211ENST00000542813 B9D2Q9BPU9 175 aa2.45□□□□□ -2.02
SFSWAP-211ENST00000542813 C20orf78Q9BR46 151 aa2.45□□□□□ -2.02
SFSWAP-211ENST00000542813 NAA38Q9BRA0 125 aaKnown RBP2.45□□□□□ -2.02
SFSWAP-211ENST00000542813 PRADC1Q9BSG0 188 aa2.45□□□□□ -2.02
SFSWAP-211ENST00000542813 FAM103A1Q9BTL3 118 aaKnown RBP2.45□□□□□ -2.02
SFSWAP-211ENST00000542813 TMEM70Q9BUB7 260 aa2.45□□□□□ -2.02
SFSWAP-211ENST00000542813 OR2H1Q9GZK4 316 aa2.45□□□□□ -2.02
SFSWAP-211ENST00000542813 PBOV1Q9GZY1 135 aa2.45□□□□□ -2.02
SFSWAP-211ENST00000542813 TMEM191AQ9H0A3 160 aa2.45□□□□□ -2.02
SFSWAP-211ENST00000542813 ANAPC11Q9NYG5 84 aa2.45□□□□□ -2.02
SFSWAP-211ENST00000542813 IDI2-AS1Q9NZ38 188 aa2.45□□□□□ -2.02
SFSWAP-211ENST00000542813 PRO0461Q9UI25 63 aa2.45□□□□□ -2.02
SFSWAP-211ENST00000542813 NSD1Q96L73 2696 aaPredicted RBP2.45□□□□□ -2.02
SFSWAP-211ENST00000542813 PI4KAP42356 2102 aa2.45□□□□□ -2.02
SFSWAP-211ENST00000542813 CACNA1CQ13936 2221 aa2.45□□□□□ -2.02
SFSWAP-211ENST00000542813 NOTCH1P46531 2555 aa2.45□□□□□ -2.02
SFSWAP-211ENST00000542813 KNL1Q8NG31 2342 aa2.44□□□□□ -2.02
SFSWAP-211ENST00000542813 TRBV20OR9-2A0A075B6H5 130 aa2.44□□□□□ -2.02
SFSWAP-211ENST00000542813 IGKV1-12A0A0C4DH73 117 aa2.44□□□□□ -2.02
SFSWAP-211ENST00000542813 CXorf51AA0A1B0GTR3 108 aa2.44□□□□□ -2.02
SFSWAP-211ENST00000542813 M0R381 172 aa2.44□□□□□ -2.02
SFSWAP-211ENST00000542813 APOMO95445 188 aa2.44□□□□□ -2.02
SFSWAP-211ENST00000542813 FSTL3O95633 263 aa2.44□□□□□ -2.02
SFSWAP-211ENST00000542813 NAPSAO96009 420 aa2.44□□□□□ -2.02
SFSWAP-211ENST00000542813 IGKV1D-12P01611 117 aa2.44□□□□□ -2.02
SFSWAP-211ENST00000542813 TRGV3P03979 118 aa2.44□□□□□ -2.02
SFSWAP-211ENST00000542813 CLPSP04118 112 aa2.44□□□□□ -2.02
SFSWAP-211ENST00000542813 SLC25A5P05141 298 aaKnown RBP2.44□□□□□ -2.02
SFSWAP-211ENST00000542813 IFI6P09912 130 aa2.44□□□□□ -2.02
SFSWAP-211ENST00000542813 COL8A2P25067 703 aa2.44□□□□□ -2.02
SFSWAP-211ENST00000542813 FXYD4P59646 89 aa2.44□□□□□ -2.02
SFSWAP-211ENST00000542813 BSPH1Q075Z2 132 aa2.44□□□□□ -2.02
SFSWAP-211ENST00000542813 EIF3IQ13347 325 aaKnown RBP2.44□□□□□ -2.02
SFSWAP-211ENST00000542813 ETDBQ3ZM63 59 aa2.44□□□□□ -2.02
SFSWAP-211ENST00000542813 LINC00483Q53H64 154 aa2.44□□□□□ -2.02
SFSWAP-211ENST00000542813 IBA57Q5T440 356 aaKnown RBP2.44□□□□□ -2.02
SFSWAP-211ENST00000542813 RASL11AQ6T310 242 aa2.44□□□□□ -2.02
SFSWAP-211ENST00000542813 RPP25LQ8N5L8 163 aaKnown RBP2.44□□□□□ -2.02
SFSWAP-211ENST00000542813 LY6G5BQ8NDX9 201 aa2.44□□□□□ -2.02
SFSWAP-211ENST00000542813 PPDPFLQ8WWR9 84 aa2.44□□□□□ -2.02
SFSWAP-211ENST00000542813 PRELID3AQ96N28 172 aa2.44□□□□□ -2.02
SFSWAP-211ENST00000542813 TMEM222Q9H0R3 208 aa2.44□□□□□ -2.02
SFSWAP-211ENST00000542813 IL36BQ9NZH7 164 aa2.44□□□□□ -2.02
SFSWAP-211ENST00000542813 PRNDQ9UKY0 176 aa2.44□□□□□ -2.02
SFSWAP-211ENST00000542813 CELA1Q9UNI1 258 aa2.44□□□□□ -2.02
SFSWAP-211ENST00000542813 PKIGQ9Y2B9 76 aa2.44□□□□□ -2.02
SFSWAP-211ENST00000542813 PHLDA3Q9Y5J5 127 aa2.44□□□□□ -2.02
SFSWAP-211ENST00000542813 ARL2-SNX15V9GYD0 113 aa2.44□□□□□ -2.02
SFSWAP-211ENST00000542813 ALPK2Q86TB3 2170 aa2.44□□□□□ -2.02
SFSWAP-211ENST00000542813 FREM3P0C091 2139 aa2.44□□□□□ -2.02
SFSWAP-211ENST00000542813 PRRC2CQ9Y520 2896 aaKnown RBP2.43□□□□□ -2.02
SFSWAP-211ENST00000542813 ADAMTS9Q9P2N4 1935 aa2.43□□□□□ -2.02
SFSWAP-211ENST00000542813 LOC107984640A0A0U1RRK4 108 aa2.43□□□□□ -2.02
SFSWAP-211ENST00000542813 C3orf85A0A1B0GTC6 90 aa2.43□□□□□ -2.02
SFSWAP-211ENST00000542813 A0A1W2PNU3 283 aaPredicted RBP2.43□□□□□ -2.02
SFSWAP-211ENST00000542813 A6NED7 52 aa2.43□□□□□ -2.02
SFSWAP-211ENST00000542813 M0R2P5 195 aa2.43□□□□□ -2.02
SFSWAP-211ENST00000542813 SNCGO76070 127 aa2.43□□□□□ -2.02
SFSWAP-211ENST00000542813 IGLV3-1P01715 115 aa2.43□□□□□ -2.02
SFSWAP-211ENST00000542813 IGLC6P0CF74 106 aa2.43□□□□□ -2.02
SFSWAP-211ENST00000542813 FGF6P10767 208 aa2.43□□□□□ -2.02
SFSWAP-211ENST00000542813 IAPPP10997 89 aa2.43□□□□□ -2.02
SFSWAP-211ENST00000542813 DEFA4P12838 97 aa2.43□□□□□ -2.02
SFSWAP-211ENST00000542813 ATP5G3P48201 142 aa2.43□□□□□ -2.02
SFSWAP-211ENST00000542813 GNG5P63218 68 aa2.43□□□□□ -2.02
SFSWAP-211ENST00000542813 SERF2P84101 59 aa2.43□□□□□ -2.02
SFSWAP-211ENST00000542813 HES1Q14469 280 aa2.43□□□□□ -2.02
SFSWAP-211ENST00000542813 Q56UQ5 140 aa2.43□□□□□ -2.02
SFSWAP-211ENST00000542813 SPRNQ5BIV9 151 aa2.43□□□□□ -2.02
SFSWAP-211ENST00000542813 AMTNQ6UX39 209 aa2.43□□□□□ -2.02
SFSWAP-211ENST00000542813 TMEM136Q6ZRR5 245 aa2.43□□□□□ -2.02
SFSWAP-211ENST00000542813 SH2D6Q7Z4S9 175 aa2.43□□□□□ -2.02
SFSWAP-211ENST00000542813 FAM19A2Q8N3H0 131 aa2.43□□□□□ -2.02
SFSWAP-211ENST00000542813 ST20-AS1Q8NBB2 130 aa2.43□□□□□ -2.02
SFSWAP-211ENST00000542813 LMX1AQ8TE12 382 aa2.43□□□□□ -2.02
SFSWAP-211ENST00000542813 RMI2Q96E14 147 aa2.43□□□□□ -2.02
SFSWAP-211ENST00000542813 TXNDC17Q9BRA2 123 aa2.43□□□□□ -2.02
SFSWAP-211ENST00000542813 SLC39A9Q9NUM3 307 aa2.43□□□□□ -2.02
SFSWAP-211ENST00000542813 HIGD1BQ9P298 99 aa2.43□□□□□ -2.02
SFSWAP-211ENST00000542813 MPC1Q9Y5U8 109 aa2.43□□□□□ -2.02
SFSWAP-211ENST00000542813 LY96Q9Y6Y9 160 aa2.43□□□□□ -2.02
SFSWAP-211ENST00000542813 ARHGAP21Q5T5U3 1957 aa2.43□□□□□ -2.02
SFSWAP-211ENST00000542813 CACNA1DQ01668 2161 aa2.43□□□□□ -2.02
SFSWAP-211ENST00000542813 ANK2Q01484 3957 aa2.42□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms