RNA–Protein interactions for RNA: ENST00000542714.5

CHFR-221, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 4

Gene CHFR, Length 542 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-221ENST00000542714 SMIM2Q9BVW6 85 aa9.41□□□□□ -0.9
CHFR-221ENST00000542714 Q9UF83 564 aa9.41□□□□□ -0.9
CHFR-221ENST00000542714 MGAM2Q2M2H8 2515 aa9.41□□□□□ -0.9
CHFR-221ENST00000542714 TRGV2A0A075B6R0 118 aa9.4□□□□□ -0.9
CHFR-221ENST00000542714 DEFB130BP0DP73 79 aa9.4□□□□□ -0.9
CHFR-221ENST00000542714 DEFB130AP0DP74 79 aa9.4□□□□□ -0.9
CHFR-221ENST00000542714 RPL32P62910 135 aaKnown RBP9.4□□□□□ -0.9
CHFR-221ENST00000542714 FA2HQ7L5A8 372 aa9.4□□□□□ -0.9
CHFR-221ENST00000542714 FAM19A2Q8N3H0 131 aa9.4□□□□□ -0.9
CHFR-221ENST00000542714 NIT2Q9NQR4 276 aa9.4□□□□□ -0.9
CHFR-221ENST00000542714 IGHV1-24A0A0C4DH33 117 aa9.39□□□□□ -0.91
CHFR-221ENST00000542714 H7C1H1 209 aa9.39□□□□□ -0.91
CHFR-221ENST00000542714 PPP1R17O96001 155 aa9.39□□□□□ -0.91
CHFR-221ENST00000542714 FABP4P15090 132 aa9.39□□□□□ -0.91
CHFR-221ENST00000542714 PMCHP20382 165 aa9.39□□□□□ -0.91
CHFR-221ENST00000542714 POLR2KP53803 58 aaKnown RBP9.39□□□□□ -0.91
CHFR-221ENST00000542714 FHL2Q14192 279 aa9.39□□□□□ -0.91
CHFR-221ENST00000542714 PMCHL1Q16048 86 aa9.39□□□□□ -0.91
CHFR-221ENST00000542714 DEFB121Q5J5C9 76 aa9.39□□□□□ -0.91
CHFR-221ENST00000542714 NEGR1Q7Z3B1 354 aa9.39□□□□□ -0.91
CHFR-221ENST00000542714 TM2D3Q9BRN9 247 aa9.39□□□□□ -0.91
CHFR-221ENST00000542714 ST20Q9HBF5 79 aa9.39□□□□□ -0.91
CHFR-221ENST00000542714 NXT2Q9NPJ8 142 aaKnown RBP9.39□□□□□ -0.91
CHFR-221ENST00000542714 NBEAL1Q6ZS30 2694 aa9.38□□□□□ -0.91
CHFR-221ENST00000542714 A0A096LNJ9 63 aa9.38□□□□□ -0.91
CHFR-221ENST00000542714 HSBP1O75506 76 aa9.38□□□□□ -0.91
CHFR-221ENST00000542714 S100A2P29034 98 aa9.38□□□□□ -0.91
CHFR-221ENST00000542714 NEXN-AS1Q8NBZ9 246 aa9.38□□□□□ -0.91
CHFR-221ENST00000542714 TMEM70Q9BUB7 260 aa9.38□□□□□ -0.91
CHFR-221ENST00000542714 C11orf68Q9H3H3 251 aaKnown RBP9.38□□□□□ -0.91
CHFR-221ENST00000542714 AP5S1Q9NUS5 200 aa9.38□□□□□ -0.91
CHFR-221ENST00000542714 NBEAL2Q6ZNJ1 2754 aa9.38□□□□□ -0.91
CHFR-221ENST00000542714 SDHAF1A6NFY7 115 aa9.37□□□□□ -0.91
CHFR-221ENST00000542714 K7EQD1 137 aa9.37□□□□□ -0.91
CHFR-221ENST00000542714 CIDEAO60543 219 aa9.37□□□□□ -0.91
CHFR-221ENST00000542714 AMTP48728 403 aa9.37□□□□□ -0.91
CHFR-221ENST00000542714 SLC25A29Q8N8R3 303 aa9.37□□□□□ -0.91
CHFR-221ENST00000542714 TMEM18Q96B42 140 aa9.37□□□□□ -0.91
CHFR-221ENST00000542714 PACRGQ96M98 296 aaPredicted RBP9.37□□□□□ -0.91
CHFR-221ENST00000542714 SPATA25Q9BR10 227 aa9.37□□□□□ -0.91
CHFR-221ENST00000542714 TCAPO15273 167 aa9.36□□□□□ -0.91
CHFR-221ENST00000542714 SPART-AS1P0CW21 52 aa9.36□□□□□ -0.91
CHFR-221ENST00000542714 DAD1P61803 113 aa9.36□□□□□ -0.91
CHFR-221ENST00000542714 MRAPQ8TCY5 172 aa9.36□□□□□ -0.91
CHFR-221ENST00000542714 TRGV4A0A0C4DH28 118 aa9.35□□□□□ -0.91
CHFR-221ENST00000542714 TRBV27A0A0K0K1C4 114 aa9.35□□□□□ -0.91
CHFR-221ENST00000542714 LINC00173Q6ZV60 143 aa9.35□□□□□ -0.91
CHFR-221ENST00000542714 OR10D4PQ8NGN7 298 aa9.35□□□□□ -0.91
CHFR-221ENST00000542714 DNAJC30Q96LL9 226 aa9.35□□□□□ -0.91
CHFR-221ENST00000542714 DNHD1Q96M86 4753 aa9.34□□□□□ -0.91
CHFR-221ENST00000542714 HUWE1Q7Z6Z7 4374 aaKnown RBP9.34□□□□□ -0.91
CHFR-221ENST00000542714 A0A0J9YWU9 116 aa9.34□□□□□ -0.91
CHFR-221ENST00000542714 TRBV10-1A0A0K0K1A3 114 aa9.34□□□□□ -0.91
CHFR-221ENST00000542714 LOC100131303A0A0U1RQF7 123 aa9.34□□□□□ -0.91
CHFR-221ENST00000542714 TRBV6-4A0A1B0GX49 114 aa9.34□□□□□ -0.91
CHFR-221ENST00000542714 VCYO14598 125 aa9.34□□□□□ -0.91
CHFR-221ENST00000542714 TSHBP01222 138 aa9.34□□□□□ -0.91
CHFR-221ENST00000542714 AKR1D1P51857 326 aa9.34□□□□□ -0.91
CHFR-221ENST00000542714 LAGE3Q14657 143 aa9.34□□□□□ -0.91
CHFR-221ENST00000542714 C12orf74Q32Q52 190 aa9.34□□□□□ -0.91
CHFR-221ENST00000542714 DEFB104AQ8WTQ1 72 aa9.34□□□□□ -0.91
CHFR-221ENST00000542714 TEX48A0A1B0GUV7 120 aa9.33□□□□□ -0.92
CHFR-221ENST00000542714 LINC00694P0DN24 101 aa9.33□□□□□ -0.92
CHFR-221ENST00000542714 TNFRSF18Q9Y5U5 241 aa9.33□□□□□ -0.92
CHFR-221ENST00000542714 TENM3Q9P273 2699 aa9.33□□□□□ -0.92
CHFR-221ENST00000542714 I3L3M4 83 aa9.32□□□□□ -0.92
CHFR-221ENST00000542714 K7EMI3 77 aa9.32□□□□□ -0.92
CHFR-221ENST00000542714 HBDP02042 147 aa9.32□□□□□ -0.92
CHFR-221ENST00000542714 FCER1GP30273 86 aa9.32□□□□□ -0.92
CHFR-221ENST00000542714 CRYBA4P53673 196 aa9.32□□□□□ -0.92
CHFR-221ENST00000542714 ZNRF2Q8NHG8 242 aa9.32□□□□□ -0.92
CHFR-221ENST00000542714 TRBV7-3A0A075B6L6 115 aa9.31□□□□□ -0.92
CHFR-221ENST00000542714 GAGE12JA6NER3 117 aa9.31□□□□□ -0.92
CHFR-221ENST00000542714 ATP5G1P05496 136 aa9.31□□□□□ -0.92
CHFR-221ENST00000542714 UBE2D3P61077 147 aa9.31□□□□□ -0.92
CHFR-221ENST00000542714 UBE2D2P62837 147 aa9.31□□□□□ -0.92
CHFR-221ENST00000542714 GAGE1Q13065 139 aa9.31□□□□□ -0.92
CHFR-221ENST00000542714 GAGE4Q13068 117 aa9.31□□□□□ -0.92
CHFR-221ENST00000542714 GAGE5Q13069 117 aa9.31□□□□□ -0.92
CHFR-221ENST00000542714 RHOHQ15669 191 aa9.31□□□□□ -0.92
CHFR-221ENST00000542714 GAGE13Q4V321 117 aa9.31□□□□□ -0.92
CHFR-221ENST00000542714 B9D2Q9BPU9 175 aa9.31□□□□□ -0.92
CHFR-221ENST00000542714 HHLA3Q9XRX5 114 aa9.31□□□□□ -0.92
CHFR-221ENST00000542714 DNAH9Q9NYC9 4486 aa9.31□□□□□ -0.92
CHFR-221ENST00000542714 IGHV3-38A0A0C4DH36 116 aa9.3□□□□□ -0.92
CHFR-221ENST00000542714 LEPROTL1O95214 131 aa9.3□□□□□ -0.92
CHFR-221ENST00000542714 RPL36AP83881 106 aaKnown RBP9.3□□□□□ -0.92
CHFR-221ENST00000542714 ORMDL2Q53FV1 153 aa9.3□□□□□ -0.92
CHFR-221ENST00000542714 PHLDA1Q8WV24 401 aaPredicted RBP9.3□□□□□ -0.92
CHFR-221ENST00000542714 RPL36ALQ969Q0 106 aaKnown RBP9.3□□□□□ -0.92
CHFR-221ENST00000542714 VSIG2Q96IQ7 327 aa9.3□□□□□ -0.92
CHFR-221ENST00000542714 KIR2DL4Q99706 377 aa9.3□□□□□ -0.92
CHFR-221ENST00000542714 NUDT3O95989 172 aa9.29□□□□□ -0.92
CHFR-221ENST00000542714 C3orf79P0CE67 100 aa9.29□□□□□ -0.92
CHFR-221ENST00000542714 PRADC1Q9BSG0 188 aa9.29□□□□□ -0.92
CHFR-221ENST00000542714 PRO0255Q9UI72 69 aa9.29□□□□□ -0.92
CHFR-221ENST00000542714 HTN3P15516 51 aa9.28□□□□□ -0.92
CHFR-221ENST00000542714 BTF3P20290 206 aaKnown RBP9.28□□□□□ -0.92
CHFR-221ENST00000542714 SPATA12Q7Z6I5 190 aa9.28□□□□□ -0.92
CHFR-221ENST00000542714 Q8N976 141 aa9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 61.5 ms