RNA–Protein interactions for RNA: ENST00000542570.5

TOP3A-208, Transcript of DNA topoisomerase III alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TOP3A, Length 4,116 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-208ENST00000542570 CEMP1Q6PRD7 247 aaPredicted RBP7.6□□□□□ -1.19
TOP3A-208ENST00000542570 SUMO4Q6EEV6 95 aa7.6□□□□□ -1.19
TOP3A-208ENST00000542570 RBAKDNA6NC62 111 aa7.6□□□□□ -1.19
TOP3A-208ENST00000542570 FAM110AQ9BQ89 295 aa7.6□□□□□ -1.19
TOP3A-208ENST00000542570 COL27A1Q8IZC6 1860 aaPredicted RBP7.6□□□□□ -1.19
TOP3A-208ENST00000542570 NIPBLQ6KC79 2804 aaeCLIP7.6□□□□□ -1.19
TOP3A-208ENST00000542570 Q6ZVH6 145 aa7.59□□□□□ -1.19
TOP3A-208ENST00000542570 ZFAND2AQ8N6M9 145 aa7.59□□□□□ -1.19
TOP3A-208ENST00000542570 H3BMM0 161 aa7.59□□□□□ -1.19
TOP3A-208ENST00000542570 EREGO14944 169 aa7.59□□□□□ -1.19
TOP3A-208ENST00000542570 LINC01559Q495D7 138 aa7.59□□□□□ -1.19
TOP3A-208ENST00000542570 TRPT1Q86TN4 253 aaKnown RBP7.59□□□□□ -1.19
TOP3A-208ENST00000542570 Q8N8P6 123 aa7.59□□□□□ -1.19
TOP3A-208ENST00000542570 M0R2P5 195 aa7.59□□□□□ -1.19
TOP3A-208ENST00000542570 CMC4P56277 68 aaPredicted RBP7.59□□□□□ -1.19
TOP3A-208ENST00000542570 Q6ZTI0 123 aa7.59□□□□□ -1.19
TOP3A-208ENST00000542570 OR5A1Q8NGJ0 315 aa7.59□□□□□ -1.19
TOP3A-208ENST00000542570 MBD6Q96DN6 1003 aa7.59□□□□□ -1.19
TOP3A-208ENST00000542570 TEX43Q6ZNM6 134 aa7.59□□□□□ -1.2
TOP3A-208ENST00000542570 H3BUT2 72 aa7.58□□□□□ -1.2
TOP3A-208ENST00000542570 HLA-DRB4P13762 266 aa7.58□□□□□ -1.2
TOP3A-208ENST00000542570 PCP4P48539 62 aa7.58□□□□□ -1.2
TOP3A-208ENST00000542570 KLF5Q13887 457 aaPredicted RBP7.58□□□□□ -1.2
TOP3A-208ENST00000542570 HLA-DRB4X5D2U9 266 aa7.58□□□□□ -1.2
TOP3A-208ENST00000542570 GAGE10A6NGK3 116 aa7.58□□□□□ -1.2
TOP3A-208ENST00000542570 A8MWV9 139 aa7.58□□□□□ -1.2
TOP3A-208ENST00000542570 FBN2P35556 2912 aa7.58□□□□□ -1.2
TOP3A-208ENST00000542570 HILS1P60008 231 aa7.58□□□□□ -1.2
TOP3A-208ENST00000542570 ZNF747Q9BV97 191 aa7.58□□□□□ -1.2
TOP3A-208ENST00000542570 IGLV10-54A0A075B6I4 117 aa7.57□□□□□ -1.2
TOP3A-208ENST00000542570 MALP21145 153 aa7.57□□□□□ -1.2
TOP3A-208ENST00000542570 LBHQ53QV2 105 aaPredicted RBP7.57□□□□□ -1.2
TOP3A-208ENST00000542570 LENEPQ9Y5L5 61 aa7.57□□□□□ -1.2
TOP3A-208ENST00000542570 PRSS29PA6NIE9 313 aa7.57□□□□□ -1.2
TOP3A-208ENST00000542570 GATD1Q8NB37 220 aa7.57□□□□□ -1.2
TOP3A-208ENST00000542570 CHAC1Q9BUX1 264 aa7.57□□□□□ -1.2
TOP3A-208ENST00000542570 I3L3M4 83 aa7.56□□□□□ -1.2
TOP3A-208ENST00000542570 APCP25054 2843 aa7.56□□□□□ -1.2
TOP3A-208ENST00000542570 C9orf66Q5T8R8 295 aa7.56□□□□□ -1.2
TOP3A-208ENST00000542570 PCP2Q8IVA1 136 aa7.56□□□□□ -1.2
TOP3A-208ENST00000542570 MRPS12O15235 138 aaKnown RBP7.56□□□□□ -1.2
TOP3A-208ENST00000542570 PAX4O43316 350 aa7.56□□□□□ -1.2
TOP3A-208ENST00000542570 GTF2H5Q6ZYL4 71 aa7.56□□□□□ -1.2
TOP3A-208ENST00000542570 DCANP1Q8TF63 244 aa7.56□□□□□ -1.2
TOP3A-208ENST00000542570 TMEM86BQ8N661 226 aa7.55□□□□□ -1.2
TOP3A-208ENST00000542570 SPENQ96T58 3664 aaKnown RBP7.55□□□□□ -1.2
TOP3A-208ENST00000542570 CIRBPQ14011 172 aaKnown RBP7.55□□□□□ -1.2
TOP3A-208ENST00000542570 A0A1B0GV72 72 aa7.55□□□□□ -1.2
TOP3A-208ENST00000542570 HRNRQ86YZ3 2850 aaPredicted RBP7.54□□□□□ -1.2
TOP3A-208ENST00000542570 NSD1Q96L73 2696 aaPredicted RBP7.54□□□□□ -1.2
TOP3A-208ENST00000542570 TMEM89A2RUT3 159 aa7.54□□□□□ -1.2
TOP3A-208ENST00000542570 LINC00158P58513 81 aa7.54□□□□□ -1.2
TOP3A-208ENST00000542570 RHODO00212 210 aa7.54□□□□□ -1.2
TOP3A-208ENST00000542570 GYPEP15421 78 aa7.54□□□□□ -1.2
TOP3A-208ENST00000542570 SMAGPQ0VAQ4 97 aa7.54□□□□□ -1.2
TOP3A-208ENST00000542570 ZNF479Q96JC4 524 aa7.54□□□□□ -1.2
TOP3A-208ENST00000542570 A0A0J9YXV3 536 aa7.54□□□□□ -1.2
TOP3A-208ENST00000542570 A0A1B0GXF2 115 aa7.54□□□□□ -1.2
TOP3A-208ENST00000542570 H3BRM9 83 aa7.54□□□□□ -1.2
TOP3A-208ENST00000542570 PFN2P35080 140 aa7.54□□□□□ -1.2
TOP3A-208ENST00000542570 APOC4P55056 127 aa7.54□□□□□ -1.2
TOP3A-208ENST00000542570 MTURNQ8N3F0 131 aa7.54□□□□□ -1.2
TOP3A-208ENST00000542570 SMIM13P0DJ93 91 aa7.53□□□□□ -1.2
TOP3A-208ENST00000542570 IGLC3P0DOY3 106 aa7.53□□□□□ -1.2
TOP3A-208ENST00000542570 FABP2P12104 132 aa7.53□□□□□ -1.2
TOP3A-208ENST00000542570 CTRLP40313 264 aa7.53□□□□□ -1.2
TOP3A-208ENST00000542570 ANKRD39Q53RE8 183 aa7.53□□□□□ -1.2
TOP3A-208ENST00000542570 CRPP02741 224 aa7.53□□□□□ -1.2
TOP3A-208ENST00000542570 ANGP03950 147 aaKnown RBP7.53□□□□□ -1.2
TOP3A-208ENST00000542570 C6orf226Q5I0X4 101 aa7.53□□□□□ -1.2
TOP3A-208ENST00000542570 SNHG12Q9BXW3 62 aa7.53□□□□□ -1.2
TOP3A-208ENST00000542570 SPINK8P0C7L1 97 aa7.53□□□□□ -1.2
TOP3A-208ENST00000542570 IGLC6P0CF74 106 aa7.53□□□□□ -1.2
TOP3A-208ENST00000542570 C5orf38Q86SI9 138 aa7.53□□□□□ -1.2
TOP3A-208ENST00000542570 YPEL4Q96NS1 127 aa7.53□□□□□ -1.2
TOP3A-208ENST00000542570 NXPH4O95158 308 aa7.52□□□□□ -1.21
TOP3A-208ENST00000542570 XCL1P47992 114 aa7.52□□□□□ -1.21
TOP3A-208ENST00000542570 Q9HAA7 133 aa7.52□□□□□ -1.21
TOP3A-208ENST00000542570 COA6Q5JTJ3 125 aaKnown RBP7.52□□□□□ -1.21
TOP3A-208ENST00000542570 PRIMA1Q86XR5 153 aa7.52□□□□□ -1.21
TOP3A-208ENST00000542570 CUBNO60494 3623 aa7.52□□□□□ -1.21
TOP3A-208ENST00000542570 TRBV25-1A0A075B6N4 114 aa7.51□□□□□ -1.21
TOP3A-208ENST00000542570 LGALS9O00182 355 aa7.51□□□□□ -1.21
TOP3A-208ENST00000542570 ESDP10768 282 aa7.51□□□□□ -1.21
TOP3A-208ENST00000542570 PMVKQ15126 192 aa7.51□□□□□ -1.21
TOP3A-208ENST00000542570 ODF3L2Q3SX64 289 aa7.51□□□□□ -1.21
TOP3A-208ENST00000542570 ZFP2Q6ZN57 461 aa7.51□□□□□ -1.21
TOP3A-208ENST00000542570 TMEM238LA0A1B0GVL6 79 aa7.51□□□□□ -1.21
TOP3A-208ENST00000542570 A6NJY4 79 aa7.51□□□□□ -1.21
TOP3A-208ENST00000542570 CFAP161Q6P656 301 aa7.51□□□□□ -1.21
TOP3A-208ENST00000542570 TMEM243Q9BU79 118 aa7.51□□□□□ -1.21
TOP3A-208ENST00000542570 RNASE3P12724 160 aaKnown RBP7.51□□□□□ -1.21
TOP3A-208ENST00000542570 TIMM21Q9BVV7 248 aa7.51□□□□□ -1.21
TOP3A-208ENST00000542570 UBE2DNLQ8IWF7 75 aa7.5□□□□□ -1.21
TOP3A-208ENST00000542570 RASL10AQ92737 203 aa7.5□□□□□ -1.21
TOP3A-208ENST00000542570 PLNP26678 52 aa7.5□□□□□ -1.21
TOP3A-208ENST00000542570 FAM222AQ5U5X8 452 aa7.5□□□□□ -1.21
TOP3A-208ENST00000542570 ORAOV1Q8WV07 137 aa7.5□□□□□ -1.21
TOP3A-208ENST00000542570 NDUFA11Q86Y39 141 aa7.5□□□□□ -1.21
TOP3A-208ENST00000542570 F8VRH5 84 aa7.49□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms