RNA–Protein interactions for RNA: ENST00000542179.1

LDHA-220, Transcript of lactate dehydrogenase A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LDHA, Length 1,288 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDHA-220ENST00000542179 Q6ZTI0 123 aa6.6□□□□□ -1.35
LDHA-220ENST00000542179 URB1-AS1Q96HZ7 61 aa6.6□□□□□ -1.35
LDHA-220ENST00000542179 PACRGQ96M98 296 aaPredicted RBP6.6□□□□□ -1.35
LDHA-220ENST00000542179 MAP1LC3AQ9H492 121 aa6.6□□□□□ -1.35
LDHA-220ENST00000542179 ANK2Q01484 3957 aa6.6□□□□□ -1.35
LDHA-220ENST00000542179 TRAV4A0A0B4J268 109 aa6.59□□□□□ -1.35
LDHA-220ENST00000542179 TRBV6-5A0A0K0K1A5 114 aa6.59□□□□□ -1.35
LDHA-220ENST00000542179 LINC01546A6NGU7 62 aa6.59□□□□□ -1.35
LDHA-220ENST00000542179 LYRM9A8MSI8 78 aa6.59□□□□□ -1.35
LDHA-220ENST00000542179 H7C1H1 209 aa6.59□□□□□ -1.35
LDHA-220ENST00000542179 GATA1P15976 413 aaPredicted RBP6.59□□□□□ -1.35
LDHA-220ENST00000542179 RPL32P62910 135 aaKnown RBP6.59□□□□□ -1.35
LDHA-220ENST00000542179 Q8NAQ8 132 aa6.59□□□□□ -1.35
LDHA-220ENST00000542179 OR4C5Q8NGB2 326 aa6.59□□□□□ -1.35
LDHA-220ENST00000542179 PRSS3P2Q8NHM4 247 aa6.59□□□□□ -1.35
LDHA-220ENST00000542179 IGLV2-18A0A075B6J9 118 aa6.58□□□□□ -1.36
LDHA-220ENST00000542179 IGHV4-28A0A0C4DH34 117 aa6.58□□□□□ -1.36
LDHA-220ENST00000542179 IFITM10A6NMD0 228 aa6.58□□□□□ -1.36
LDHA-220ENST00000542179 K7EIL1 84 aa6.58□□□□□ -1.36
LDHA-220ENST00000542179 K7EMI3 77 aa6.58□□□□□ -1.36
LDHA-220ENST00000542179 IGHV3-53P01767 116 aa6.58□□□□□ -1.36
LDHA-220ENST00000542179 PMCHP20382 165 aa6.58□□□□□ -1.36
LDHA-220ENST00000542179 S100A2P29034 98 aa6.58□□□□□ -1.36
LDHA-220ENST00000542179 IFI27P40305 119 aaPredicted RBP6.58□□□□□ -1.36
LDHA-220ENST00000542179 SUMO2P61956 95 aaKnown RBP6.58□□□□□ -1.36
LDHA-220ENST00000542179 ZNF56Q15929 161 aa6.58□□□□□ -1.36
LDHA-220ENST00000542179 Q8N8P6 123 aa6.58□□□□□ -1.36
LDHA-220ENST00000542179 NXT2Q9NPJ8 142 aaKnown RBP6.58□□□□□ -1.36
LDHA-220ENST00000542179 NIT2Q9NQR4 276 aa6.58□□□□□ -1.36
LDHA-220ENST00000542179 CMYA5Q8N3K9 4069 aa6.57□□□□□ -1.36
LDHA-220ENST00000542179 LOC389332A0A1B0GUA5 103 aa6.57□□□□□ -1.36
LDHA-220ENST00000542179 GAGE12BA1L429 117 aa6.57□□□□□ -1.36
LDHA-220ENST00000542179 HSBP1O75506 76 aa6.57□□□□□ -1.36
LDHA-220ENST00000542179 GAGE7O76087 117 aa6.57□□□□□ -1.36
LDHA-220ENST00000542179 GAGE12FP0CL80 117 aa6.57□□□□□ -1.36
LDHA-220ENST00000542179 GAGE12GP0CL81 117 aa6.57□□□□□ -1.36
LDHA-220ENST00000542179 GAGE12IP0CL82 117 aa6.57□□□□□ -1.36
LDHA-220ENST00000542179 POLR2KP53803 58 aaKnown RBP6.57□□□□□ -1.36
LDHA-220ENST00000542179 LCE4AQ5TA78 99 aa6.57□□□□□ -1.36
LDHA-220ENST00000542179 RNASEKQ6P5S7 137 aaKnown RBP6.57□□□□□ -1.36
LDHA-220ENST00000542179 FA2HQ7L5A8 372 aa6.57□□□□□ -1.36
LDHA-220ENST00000542179 TMEM18Q96B42 140 aa6.57□□□□□ -1.36
LDHA-220ENST00000542179 RPL39LQ96EH5 51 aaKnown RBP6.57□□□□□ -1.36
LDHA-220ENST00000542179 ZNF479Q96JC4 524 aa6.57□□□□□ -1.36
LDHA-220ENST00000542179 DNAJC30Q96LL9 226 aa6.57□□□□□ -1.36
LDHA-220ENST00000542179 HIST1H2BLQ99880 126 aa6.57□□□□□ -1.36
LDHA-220ENST00000542179 ST20Q9HBF5 79 aa6.57□□□□□ -1.36
LDHA-220ENST00000542179 AP5S1Q9NUS5 200 aa6.57□□□□□ -1.36
LDHA-220ENST00000542179 DKK2Q9UBU2 259 aa6.57□□□□□ -1.36
LDHA-220ENST00000542179 KMT2CQ8NEZ4 4911 aaKnown RBP6.57□□□□□ -1.36
LDHA-220ENST00000542179 TRGV2A0A075B6R0 118 aa6.56□□□□□ -1.36
LDHA-220ENST00000542179 IGHV3-73A0A0B4J1V6 119 aa6.56□□□□□ -1.36
LDHA-220ENST00000542179 EMP1P54849 157 aa6.56□□□□□ -1.36
LDHA-220ENST00000542179 PDZD11Q5EBL8 140 aa6.56□□□□□ -1.36
LDHA-220ENST00000542179 Q6ZSN1 163 aa6.56□□□□□ -1.36
LDHA-220ENST00000542179 SMIM2Q9BVW6 85 aa6.56□□□□□ -1.36
LDHA-220ENST00000542179 NACAE9PAV3 2078 aa6.55□□□□□ -1.36
LDHA-220ENST00000542179 TRBV10-1A0A0K0K1A3 114 aa6.55□□□□□ -1.36
LDHA-220ENST00000542179 TRBV27A0A0K0K1C4 114 aa6.55□□□□□ -1.36
LDHA-220ENST00000542179 TEX48A0A1B0GUV7 120 aa6.55□□□□□ -1.36
LDHA-220ENST00000542179 TRBV6-4A0A1B0GX49 114 aa6.55□□□□□ -1.36
LDHA-220ENST00000542179 VCYO14598 125 aa6.55□□□□□ -1.36
LDHA-220ENST00000542179 SPART-AS1P0CW21 52 aa6.55□□□□□ -1.36
LDHA-220ENST00000542179 FABP4P15090 132 aa6.55□□□□□ -1.36
LDHA-220ENST00000542179 FAM222AQ5U5X8 452 aa6.55□□□□□ -1.36
LDHA-220ENST00000542179 SBSPONQ8IVN8 264 aa6.55□□□□□ -1.36
LDHA-220ENST00000542179 TM2D3Q9BRN9 247 aa6.55□□□□□ -1.36
LDHA-220ENST00000542179 TMEM70Q9BUB7 260 aa6.55□□□□□ -1.36
LDHA-220ENST00000542179 IGHV1-24A0A0C4DH33 117 aa6.54□□□□□ -1.36
LDHA-220ENST00000542179 SDHAF1A6NFY7 115 aa6.54□□□□□ -1.36
LDHA-220ENST00000542179 PRB2P02812 416 aaPredicted RBP6.54□□□□□ -1.36
LDHA-220ENST00000542179 DEFB130BP0DP73 79 aa6.54□□□□□ -1.36
LDHA-220ENST00000542179 DEFB130AP0DP74 79 aa6.54□□□□□ -1.36
LDHA-220ENST00000542179 AMTP48728 403 aa6.54□□□□□ -1.36
LDHA-220ENST00000542179 FHL2Q14192 279 aa6.54□□□□□ -1.36
LDHA-220ENST00000542179 LAGE3Q14657 143 aa6.54□□□□□ -1.36
LDHA-220ENST00000542179 DEFB121Q5J5C9 76 aa6.54□□□□□ -1.36
LDHA-220ENST00000542179 FAM19A2Q8N3H0 131 aa6.54□□□□□ -1.36
LDHA-220ENST00000542179 SPATA25Q9BR10 227 aa6.54□□□□□ -1.36
LDHA-220ENST00000542179 C11orf68Q9H3H3 251 aaKnown RBP6.54□□□□□ -1.36
LDHA-220ENST00000542179 DNAH3Q8TD57 4116 aa6.53□□□□□ -1.36
LDHA-220ENST00000542179 I3L3M4 83 aa6.53□□□□□ -1.36
LDHA-220ENST00000542179 TCAPO15273 167 aa6.53□□□□□ -1.36
LDHA-220ENST00000542179 FCER1GP30273 86 aa6.53□□□□□ -1.36
LDHA-220ENST00000542179 ORMDL2Q53FV1 153 aa6.53□□□□□ -1.36
LDHA-220ENST00000542179 SLC25A29Q8N8R3 303 aa6.53□□□□□ -1.36
LDHA-220ENST00000542179 NEXN-AS1Q8NBZ9 246 aa6.53□□□□□ -1.36
LDHA-220ENST00000542179 TNFRSF18Q9Y5U5 241 aa6.53□□□□□ -1.36
LDHA-220ENST00000542179 BIRC6Q9NR09 4857 aa6.52□□□□□ -1.37
LDHA-220ENST00000542179 A0A096LNJ9 63 aa6.52□□□□□ -1.37
LDHA-220ENST00000542179 TRGV4A0A0C4DH28 118 aa6.52□□□□□ -1.37
LDHA-220ENST00000542179 K7EQD1 137 aa6.52□□□□□ -1.37
LDHA-220ENST00000542179 DEFB4AO15263 64 aa6.52□□□□□ -1.37
LDHA-220ENST00000542179 HBDP02042 147 aa6.52□□□□□ -1.37
LDHA-220ENST00000542179 G0S2P27469 103 aa6.52□□□□□ -1.37
LDHA-220ENST00000542179 OR10D4PQ8NGN7 298 aa6.52□□□□□ -1.37
LDHA-220ENST00000542179 KIR2DL4Q99706 377 aa6.52□□□□□ -1.37
LDHA-220ENST00000542179 KRTAP4-9Q9BYQ8 210 aa6.52□□□□□ -1.37
LDHA-220ENST00000542179 RETNQ9HD89 108 aa6.52□□□□□ -1.37
LDHA-220ENST00000542179 MEGF8Q7Z7M0 2845 aa6.51□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 70.2 ms