RNA–Protein interactions for RNA: ENST00000542155.5

GTDC1-219, Transcript of glycosyltransferase like domain containing 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene GTDC1, Length 2,677 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTDC1-219ENST00000542155 FBN3Q75N90 2809 aa12.14□□□□□ -0.47
GTDC1-219ENST00000542155 IFI27P40305 119 aaPredicted RBP12.14□□□□□ -0.47
GTDC1-219ENST00000542155 LOC100131303A0A0U1RQF7 123 aa12.13□□□□□ -0.47
GTDC1-219ENST00000542155 NEGR1Q7Z3B1 354 aa12.13□□□□□ -0.47
GTDC1-219ENST00000542155 NANOS2P60321 138 aaKnown RBP12.13□□□□□ -0.47
GTDC1-219ENST00000542155 OR10J3Q5JRS4 329 aa12.13□□□□□ -0.47
GTDC1-219ENST00000542155 TRGV4A0A0C4DH28 118 aa12.12□□□□□ -0.47
GTDC1-219ENST00000542155 SERF1AO75920 110 aa12.12□□□□□ -0.47
GTDC1-219ENST00000542155 SNRPEP62304 92 aaKnown RBP12.12□□□□□ -0.47
GTDC1-219ENST00000542155 NIT1Q86X76 327 aa12.12□□□□□ -0.47
GTDC1-219ENST00000542155 BAGE3Q86Y29 109 aa12.12□□□□□ -0.47
GTDC1-219ENST00000542155 NEXN-AS1Q8NBZ9 246 aa12.12□□□□□ -0.47
GTDC1-219ENST00000542155 EDA2RQ9HAV5 297 aa12.12□□□□□ -0.47
GTDC1-219ENST00000542155 Q6ZTC4 211 aa12.11□□□□□ -0.47
GTDC1-219ENST00000542155 NIT2Q9NQR4 276 aa12.11□□□□□ -0.47
GTDC1-219ENST00000542155 IGLV2-18A0A075B6J9 118 aa12.11□□□□□ -0.47
GTDC1-219ENST00000542155 SUMO2P61956 95 aaKnown RBP12.11□□□□□ -0.47
GTDC1-219ENST00000542155 HTN3P15516 51 aa12.1□□□□□ -0.47
GTDC1-219ENST00000542155 HHLA3Q9XRX5 114 aa12.1□□□□□ -0.47
GTDC1-219ENST00000542155 LAMTOR2Q9Y2Q5 125 aa12.1□□□□□ -0.47
GTDC1-219ENST00000542155 COA6Q5JTJ3 125 aaKnown RBP12.1□□□□□ -0.47
GTDC1-219ENST00000542155 K7EQD1 137 aa12.09□□□□□ -0.47
GTDC1-219ENST00000542155 POLR2KP53803 58 aaKnown RBP12.09□□□□□ -0.47
GTDC1-219ENST00000542155 C11orf45Q8TAV5 145 aa12.09□□□□□ -0.47
GTDC1-219ENST00000542155 MAP1LC3AQ9H492 121 aa12.09□□□□□ -0.47
GTDC1-219ENST00000542155 PRSS47A8MTI9 375 aa12.09□□□□□ -0.47
GTDC1-219ENST00000542155 ATP5G1P05496 136 aa12.09□□□□□ -0.47
GTDC1-219ENST00000542155 PDZD11Q5EBL8 140 aa12.09□□□□□ -0.47
GTDC1-219ENST00000542155 TMEM70Q9BUB7 260 aa12.09□□□□□ -0.47
GTDC1-219ENST00000542155 TRBV6-5A0A0K0K1A5 114 aa12.08□□□□□ -0.48
GTDC1-219ENST00000542155 SDHAF1A6NFY7 115 aa12.08□□□□□ -0.48
GTDC1-219ENST00000542155 C5orf52A6NGY3 159 aa12.08□□□□□ -0.48
GTDC1-219ENST00000542155 ST20Q9HBF5 79 aa12.08□□□□□ -0.48
GTDC1-219ENST00000542155 TRBV6-4A0A1B0GX49 114 aa12.08□□□□□ -0.48
GTDC1-219ENST00000542155 F5H768 121 aa12.08□□□□□ -0.48
GTDC1-219ENST00000542155 S100A6P06703 90 aa12.08□□□□□ -0.48
GTDC1-219ENST00000542155 CRYBA4P53673 196 aa12.08□□□□□ -0.48
GTDC1-219ENST00000542155 PRSS3P2Q8NHM4 247 aa12.08□□□□□ -0.48
GTDC1-219ENST00000542155 VSIG2Q96IQ7 327 aa12.08□□□□□ -0.48
GTDC1-219ENST00000542155 C20orf78Q9BR46 151 aa12.08□□□□□ -0.48
GTDC1-219ENST00000542155 A0A0J9YY99 117 aa12.07□□□□□ -0.48
GTDC1-219ENST00000542155 H7C1H1 209 aa12.07□□□□□ -0.48
GTDC1-219ENST00000542155 TCAPO15273 167 aa12.07□□□□□ -0.48
GTDC1-219ENST00000542155 PMCHL1Q16048 86 aa12.07□□□□□ -0.48
GTDC1-219ENST00000542155 RNASEKQ6P5S7 137 aaKnown RBP12.07□□□□□ -0.48
GTDC1-219ENST00000542155 ZNRF2Q8NHG8 242 aa12.07□□□□□ -0.48
GTDC1-219ENST00000542155 SMIM2Q9BVW6 85 aa12.07□□□□□ -0.48
GTDC1-219ENST00000542155 CIDEAO60543 219 aa12.07□□□□□ -0.48
GTDC1-219ENST00000542155 LINC00614P0C842 121 aa12.07□□□□□ -0.48
GTDC1-219ENST00000542155 IGHV3-38A0A0C4DH36 116 aa12.06□□□□□ -0.48
GTDC1-219ENST00000542155 TEX48A0A1B0GUV7 120 aa12.06□□□□□ -0.48
GTDC1-219ENST00000542155 GAGE12JA6NER3 117 aa12.06□□□□□ -0.48
GTDC1-219ENST00000542155 IFITM10A6NMD0 228 aa12.06□□□□□ -0.48
GTDC1-219ENST00000542155 GAGE1Q13065 139 aa12.06□□□□□ -0.48
GTDC1-219ENST00000542155 GAGE4Q13068 117 aa12.06□□□□□ -0.48
GTDC1-219ENST00000542155 GAGE5Q13069 117 aa12.06□□□□□ -0.48
GTDC1-219ENST00000542155 GAGE13Q4V321 117 aa12.06□□□□□ -0.48
GTDC1-219ENST00000542155 FAM19A2Q8N3H0 131 aa12.06□□□□□ -0.48
GTDC1-219ENST00000542155 PPP1R17O96001 155 aa12.05□□□□□ -0.48
GTDC1-219ENST00000542155 Q8N8P6 123 aa12.05□□□□□ -0.48
GTDC1-219ENST00000542155 PHLDA1Q8WV24 401 aaPredicted RBP12.05□□□□□ -0.48
GTDC1-219ENST00000542155 PRO0255Q9UI72 69 aa12.05□□□□□ -0.48
GTDC1-219ENST00000542155 TNFRSF18Q9Y5U5 241 aa12.05□□□□□ -0.48
GTDC1-219ENST00000542155 TRAV26-1A0A087WT03 109 aa12.05□□□□□ -0.48
GTDC1-219ENST00000542155 TRBV7-3A0A075B6L6 115 aa12.04□□□□□ -0.48
GTDC1-219ENST00000542155 TRBV27A0A0K0K1C4 114 aa12.04□□□□□ -0.48
GTDC1-219ENST00000542155 NHLRC4P0CG21 123 aaPredicted RBP12.04□□□□□ -0.48
GTDC1-219ENST00000542155 HIST3H2BBQ8N257 126 aa12.04□□□□□ -0.48
GTDC1-219ENST00000542155 TRBV10-1A0A0K0K1A3 114 aa12.04□□□□□ -0.48
GTDC1-219ENST00000542155 RHOHQ15669 191 aa12.04□□□□□ -0.48
GTDC1-219ENST00000542155 TGP01266 2768 aa12.03□□□□□ -0.48
GTDC1-219ENST00000542155 PAX4O43316 350 aa12.03□□□□□ -0.48
GTDC1-219ENST00000542155 GYPEP15421 78 aa12.03□□□□□ -0.48
GTDC1-219ENST00000542155 FA2HQ7L5A8 372 aa12.03□□□□□ -0.48
GTDC1-219ENST00000542155 NXT2Q9NPJ8 142 aaKnown RBP12.03□□□□□ -0.48
GTDC1-219ENST00000542155 A0A096LNJ9 63 aa12.03□□□□□ -0.48
GTDC1-219ENST00000542155 LINC01546A6NGU7 62 aa12.03□□□□□ -0.48
GTDC1-219ENST00000542155 ESDP10768 282 aa12.03□□□□□ -0.48
GTDC1-219ENST00000542155 UBE2D3P61077 147 aa12.03□□□□□ -0.48
GTDC1-219ENST00000542155 UBE2D2P62837 147 aa12.03□□□□□ -0.48
GTDC1-219ENST00000542155 DNAJC30Q96LL9 226 aa12.03□□□□□ -0.48
GTDC1-219ENST00000542155 AP5S1Q9NUS5 200 aa12.03□□□□□ -0.48
GTDC1-219ENST00000542155 VCYO14598 125 aa12.02□□□□□ -0.49
GTDC1-219ENST00000542155 PMCHP20382 165 aa12.02□□□□□ -0.49
GTDC1-219ENST00000542155 PRADC1Q9BSG0 188 aa12.02□□□□□ -0.49
GTDC1-219ENST00000542155 TSHBP01222 138 aa12.02□□□□□ -0.49
GTDC1-219ENST00000542155 LINC00694P0DN24 101 aa12.02□□□□□ -0.49
GTDC1-219ENST00000542155 RPL32P62910 135 aaKnown RBP12.02□□□□□ -0.49
GTDC1-219ENST00000542155 RPL36AP83881 106 aaKnown RBP12.02□□□□□ -0.49
GTDC1-219ENST00000542155 RPL36ALQ969Q0 106 aaKnown RBP12.02□□□□□ -0.49
GTDC1-219ENST00000542155 A0A096LPF7 62 aa12.01□□□□□ -0.49
GTDC1-219ENST00000542155 CHCHD1Q96BP2 118 aaKnown RBP12.01□□□□□ -0.49
GTDC1-219ENST00000542155 IGHV1-24A0A0C4DH33 117 aa12.01□□□□□ -0.49
GTDC1-219ENST00000542155 CSMD3Q7Z407 3707 aa12.01□□□□□ -0.49
GTDC1-219ENST00000542155 DEFB131BA0A096LNP1 70 aa12□□□□□ -0.49
GTDC1-219ENST00000542155 I3L3M4 83 aa12□□□□□ -0.49
GTDC1-219ENST00000542155 HSBP1O75506 76 aa12□□□□□ -0.49
GTDC1-219ENST00000542155 NTM-AS1Q6ZSK4 140 aa11.99□□□□□ -0.49
GTDC1-219ENST00000542155 LAGE3Q14657 143 aa11.98□□□□□ -0.49
GTDC1-219ENST00000542155 HIST1H2BLQ99880 126 aa11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 57.1 ms