RNA–Protein interactions for RNA: ENST00000542112.5

SNHG1-219, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3 BASIC

Gene SNHG1, Length 780 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-219ENST00000542112 ZNF575Q86XF7 245 aa3.18□□□□□ -1.9
SNHG1-219ENST00000542112 KLF14Q8TD94 323 aaPredicted RBP3.18□□□□□ -1.9
SNHG1-219ENST00000542112 PROK2Q9HC23 129 aa3.18□□□□□ -1.9
SNHG1-219ENST00000542112 LINC00588Q9Y4M8 146 aa3.18□□□□□ -1.9
SNHG1-219ENST00000542112 KNTC1P50748 2209 aa3.17□□□□□ -1.9
SNHG1-219ENST00000542112 DOCK10Q96BY6 2186 aa3.17□□□□□ -1.9
SNHG1-219ENST00000542112 IGKV3D-11A0A0A0MRZ8 115 aa3.17□□□□□ -1.9
SNHG1-219ENST00000542112 LOC100131303A0A0U1RQF7 123 aa3.17□□□□□ -1.9
SNHG1-219ENST00000542112 C8orf87E5RJ46 101 aa3.17□□□□□ -1.9
SNHG1-219ENST00000542112 H3BQ85 93 aa3.17□□□□□ -1.9
SNHG1-219ENST00000542112 H7C2G1 150 aa3.17□□□□□ -1.9
SNHG1-219ENST00000542112 K7EMT4 169 aa3.17□□□□□ -1.9
SNHG1-219ENST00000542112 NTN3O00634 580 aaPredicted RBP3.17□□□□□ -1.9
SNHG1-219ENST00000542112 IGLV3-19P01714 112 aa3.17□□□□□ -1.9
SNHG1-219ENST00000542112 SLPIP03973 132 aa3.17□□□□□ -1.9
SNHG1-219ENST00000542112 CD59P13987 128 aa3.17□□□□□ -1.9
SNHG1-219ENST00000542112 UBE2AP49459 152 aa3.17□□□□□ -1.9
SNHG1-219ENST00000542112 CRIP1P50238 77 aa3.17□□□□□ -1.9
SNHG1-219ENST00000542112 FXYD7P58549 80 aa3.17□□□□□ -1.9
SNHG1-219ENST00000542112 SS18Q15532 418 aa3.17□□□□□ -1.9
SNHG1-219ENST00000542112 NNATQ16517 81 aa3.17□□□□□ -1.9
SNHG1-219ENST00000542112 ASB16-AS1Q495Z4 193 aa3.17□□□□□ -1.9
SNHG1-219ENST00000542112 MORN5Q5VZ52 161 aa3.17□□□□□ -1.9
SNHG1-219ENST00000542112 C6orf223Q8N319 242 aa3.17□□□□□ -1.9
SNHG1-219ENST00000542112 KLHL30-AS1Q8NEE0 82 aa3.17□□□□□ -1.9
SNHG1-219ENST00000542112 MPLKIPQ8TAP9 179 aa3.17□□□□□ -1.9
SNHG1-219ENST00000542112 C11orf45Q8TAV5 145 aa3.17□□□□□ -1.9
SNHG1-219ENST00000542112 OPRPNQ99935 248 aaPredicted RBP3.17□□□□□ -1.9
SNHG1-219ENST00000542112 UBL5Q9BZL1 73 aa3.17□□□□□ -1.9
SNHG1-219ENST00000542112 CYP4F30PQ9H0H9 118 aa3.17□□□□□ -1.9
SNHG1-219ENST00000542112 NDUFA4L2Q9NRX3 87 aa3.17□□□□□ -1.9
SNHG1-219ENST00000542112 PHLDA3Q9Y5J5 127 aa3.17□□□□□ -1.9
SNHG1-219ENST00000542112 SZT2Q5T011 3432 aa3.16□□□□□ -1.9
SNHG1-219ENST00000542112 IGKV1D-37A0A075B6S9 117 aa3.16□□□□□ -1.9
SNHG1-219ENST00000542112 VCYO14598 125 aa3.16□□□□□ -1.9
SNHG1-219ENST00000542112 ZNF73O43830 326 aaPredicted RBP3.16□□□□□ -1.9
SNHG1-219ENST00000542112 ZNF32P17041 273 aa3.16□□□□□ -1.9
SNHG1-219ENST00000542112 MRPS21P82921 87 aaKnown RBP3.16□□□□□ -1.9
SNHG1-219ENST00000542112 C7orf65Q6ZTY9 151 aa3.16□□□□□ -1.9
SNHG1-219ENST00000542112 DIRC1Q969H9 104 aa3.16□□□□□ -1.9
SNHG1-219ENST00000542112 CCL13Q99616 98 aa3.16□□□□□ -1.9
SNHG1-219ENST00000542112 MSRB1Q9NZV6 116 aa3.16□□□□□ -1.9
SNHG1-219ENST00000542112 LINC00474Q9P2X8 69 aa3.16□□□□□ -1.9
SNHG1-219ENST00000542112 CTSZQ9UBR2 303 aa3.16□□□□□ -1.9
SNHG1-219ENST00000542112 SMAD5-AS1Q9Y6J3 95 aa3.16□□□□□ -1.9
SNHG1-219ENST00000542112 PRUNE2Q8WUY3 3088 aa3.16□□□□□ -1.9
SNHG1-219ENST00000542112 TTC28Q96AY4 2481 aa3.15□□□□□ -1.9
SNHG1-219ENST00000542112 CACNA1HO95180 2353 aa3.15□□□□□ -1.9
SNHG1-219ENST00000542112 IGHV4OR15-8A0A075B7B6 117 aa3.15□□□□□ -1.91
SNHG1-219ENST00000542112 A0A087WW49 117 aa3.15□□□□□ -1.91
SNHG1-219ENST00000542112 IGHV1OR15-9A0A0B4J2B8 117 aa3.15□□□□□ -1.91
SNHG1-219ENST00000542112 IGKV3D-7A0A0C4DH55 119 aa3.15□□□□□ -1.91
SNHG1-219ENST00000542112 E7EUB6 86 aa3.15□□□□□ -1.91
SNHG1-219ENST00000542112 F6UB75 175 aa3.15□□□□□ -1.91
SNHG1-219ENST00000542112 TMEM256-PLSCR3K7ERE1 68 aa3.15□□□□□ -1.91
SNHG1-219ENST00000542112 CCL4P13236 92 aa3.15□□□□□ -1.91
SNHG1-219ENST00000542112 PDE6GP18545 87 aa3.15□□□□□ -1.91
SNHG1-219ENST00000542112 RPL28P46779 137 aaKnown RBP3.15□□□□□ -1.91
SNHG1-219ENST00000542112 C10orf25Q5T742 122 aa3.15□□□□□ -1.91
SNHG1-219ENST00000542112 UNQ9165/PRO28630Q6UXU0 137 aa3.15□□□□□ -1.91
SNHG1-219ENST00000542112 ZNF833PQ6ZTB9 187 aa3.15□□□□□ -1.91
SNHG1-219ENST00000542112 KRTAP1-3Q8IUG1 177 aa3.15□□□□□ -1.91
SNHG1-219ENST00000542112 C14orf178Q8N769 122 aaPredicted RBP3.15□□□□□ -1.91
SNHG1-219ENST00000542112 SPATA3Q8NHX4 192 aa3.15□□□□□ -1.91
SNHG1-219ENST00000542112 LINC01560Q8TB33 94 aa3.15□□□□□ -1.91
SNHG1-219ENST00000542112 TMEM167AQ8TBQ9 72 aa3.15□□□□□ -1.91
SNHG1-219ENST00000542112 CLEC2BQ92478 149 aa3.15□□□□□ -1.91
SNHG1-219ENST00000542112 LITAFQ99732 161 aa3.15□□□□□ -1.91
SNHG1-219ENST00000542112 MAP6D1Q9H9H5 199 aa3.15□□□□□ -1.91
SNHG1-219ENST00000542112 LINC00846Q9NV44 126 aa3.15□□□□□ -1.91
SNHG1-219ENST00000542112 MRPL36Q9P0J6 103 aaKnown RBP3.15□□□□□ -1.91
SNHG1-219ENST00000542112 BDP1A6H8Y1 2624 aa3.15□□□□□ -1.91
SNHG1-219ENST00000542112 IGHV5-10-1A0A0J9YXX1 117 aa3.14□□□□□ -1.91
SNHG1-219ENST00000542112 TRBV7-4A0A0J9YYF1 115 aa3.14□□□□□ -1.91
SNHG1-219ENST00000542112 H3BRN7 92 aa3.14□□□□□ -1.91
SNHG1-219ENST00000542112 M0R1W7 72 aa3.14□□□□□ -1.91
SNHG1-219ENST00000542112 TRBV12-3P01733 135 aa3.14□□□□□ -1.91
SNHG1-219ENST00000542112 RNASE4P34096 147 aaKnown RBP3.14□□□□□ -1.91
SNHG1-219ENST00000542112 FUSP35637 526 aaKnown RBP eCLIP3.14□□□□□ -1.91
SNHG1-219ENST00000542112 RPS21P63220 83 aaKnown RBP3.14□□□□□ -1.91
SNHG1-219ENST00000542112 KIAA0087Q14695 138 aa3.14□□□□□ -1.91
SNHG1-219ENST00000542112 KRTAP15-1Q3LI76 137 aa3.14□□□□□ -1.91
SNHG1-219ENST00000542112 HIST2H2BCQ6DN03 193 aa3.14□□□□□ -1.91
SNHG1-219ENST00000542112 HIST2H2BDQ6DRA6 164 aa3.14□□□□□ -1.91
SNHG1-219ENST00000542112 Q6ZS52 159 aa3.14□□□□□ -1.91
SNHG1-219ENST00000542112 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP3.14□□□□□ -1.91
SNHG1-219ENST00000542112 PRR26Q8N8Z3 221 aa3.14□□□□□ -1.91
SNHG1-219ENST00000542112 NKAPP1Q8N9T2 125 aa3.14□□□□□ -1.91
SNHG1-219ENST00000542112 DCTN5Q9BTE1 182 aa3.14□□□□□ -1.91
SNHG1-219ENST00000542112 LENEPQ9Y5L5 61 aa3.14□□□□□ -1.91
SNHG1-219ENST00000542112 UNC80Q8N2C7 3258 aa3.13□□□□□ -1.91
SNHG1-219ENST00000542112 ALPK2Q86TB3 2170 aa3.13□□□□□ -1.91
SNHG1-219ENST00000542112 MED13Q9UHV7 2174 aa3.13□□□□□ -1.91
SNHG1-219ENST00000542112 IGKV1D-17A0A075B6S4 117 aa3.13□□□□□ -1.91
SNHG1-219ENST00000542112 TRAV23DV6A0A075B6W5 121 aa3.13□□□□□ -1.91
SNHG1-219ENST00000542112 A0A087WVE0 104 aa3.13□□□□□ -1.91
SNHG1-219ENST00000542112 IGHV1-18A0A0C4DH31 117 aa3.13□□□□□ -1.91
SNHG1-219ENST00000542112 TRBV6-5A0A0K0K1A5 114 aa3.13□□□□□ -1.91
SNHG1-219ENST00000542112 TSPEAR-AS2P59090 65 aa3.13□□□□□ -1.91
SNHG1-219ENST00000542112 SPANXN1Q5VSR9 72 aa3.13□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms